Ptri031534.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- -
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000020.1:1509660-1512938[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-12 2.4e-09 37.8 0.0 1 39 322 361 322 365 0.90 2 4 1.1e-11 1.9e-08 34.9 0.0 2 39 377 414 376 417 0.94 3 4 1.5e-18 2.6e-15 56.9 0.0 2 45 432 476 431 476 0.97 4 4 1.8e-18 3e-15 56.7 0.1 1 42 483 525 483 526 0.97
Sequence Information
- Coding Sequence
- ATGCGAAACGCCGCTGCTGGGCGATTTGCGAAATCCCTGCTGAAGACGGCCGATCAGCTGAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAGCCGGGAGGGCCCCTCGGTGAGCTTGAGCTCGCCGCCGCGAGACTGCAGTACGCCCCGGGTGAACTTCGCCAAGCTCAAGAGGCACCATCAGCGCTACAAGAGGCAGCGGACCAACTTCGAGCCGGGCAGCAACGCCGCGCACTCCCGCGCCAACAACACGGACTCGTCGAGGCACCAGCATCACCTGCATCGTCATCACGACAGCTCCAAGTACAAGGACGAGGACTTCGTCGAGAGCTACGTGCGCGACTGCAACAAAGAGAATCGGCGAGACTGGCCAGCTGAAGATGACGATTGCATGGAGACGTCAGCGACGAGCACAGCAGCAGTAGTCCTGGACTCGCGCCAGCGCGGCAGCGGCAGCGCAGGAGGAGCCGGAGCAGACAACAACAACAGCAGCGCCAGCGCTAACAACAACGCCGCCGGACCAGCAGCCACCATCAACAACAACGGTGACATGTTCTGTCACACAGGTCTCGGTCACTACGGCCATCATCCCGATCCAGGCGAGGTAGACCTACCACCGGAGACACAGCCGACGCCGCCCAGCGCAACCCTCGTCGGCACCACCATCACTCATCTCCGGGATCCGGATCATCATACGGCAGACATCCAGAGCTGCGACAGCGTGAAGATAAAGTTCGAGACGCTGCACACGATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCGGACCGAGCGAGCGTCAGCTCGAAAAACGCCGACGAGAACATGATGATGATCACCCCCGAATTGCTGGGGCTCATGCCCTCGGGCAGCTCCGTGCACTCGGACTCGGGCGAGAATAACTCGCGCAGTCACTCCGGGCACTCGGGCTCGCACCACCACGGCTCCAAGTCCTGGACGCAGGAGGACATGGACGCGGCACTGGAGGCGCTCAGGAACCACGACATGAGCCTCACTAAAGCCTCCGCCACGTTCGGTATACCCTCGACGACGCTCTGGCAACGCGCCCATCGACTCGGCATCGATACACCGAAGAAGGACGGCCCTACCAAATCCTGGAGCGACGAGAGCCTGAATAACGCCCTCGACGCTCTGCGCACCGGCACGATCTCCGCCAACAAAGCTTCCAAGGCTTTCGGCATACCCTCGAGCACGCTTTACAAAATTGCGAGGCGAGAGGGCATTAGACTGGCAGCGCCTTTCAACGCTAGCCCAACGACTTGGTCGCCAGCCGATCTCGATCGGGCTCTCGAAGCTATTCGCTCCGGTCAGACAAGCGTGCAGAGGGCTTCCACGGAGTTCGGCATACCGACTGGGACATTGTACGGCAGATGCAAGAGGGAAGGCATCGAGCTCAGCAGGAGCAACCCTACACCCTGGAGCGAGGATGCTATGACCGAGGCACTCGAGGCCGTCAGGTTGGGTCACATGAGCATAAATCAAGCAGCAATCCACTACAATCTTCCATACTCGTCGCTGTACGGACGCTTCAAGCGAGGCAAGTACGAGGAACCGGTGGTGAATGAGATGTCGCAAGATGGATCTTCCCAGCACTTCGTTCACCAAAGCCCAACCCAGAATCATTCGTCTTCGCTTCCTGACCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- MRNAAAGRFAKSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDCSTPRVNFAKLKRHHQRYKRQRTNFEPGSNAAHSRANNTDSSRHQHHLHRHHDSSKYKDEDFVESYVRDCNKENRRDWPAEDDDCMETSATSTAAVVLDSRQRGSGSAGGAGADNNNSSASANNNAAGPAATINNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADENMMMITPELLGLMPSGSSVHSDSGENNSRSHSGHSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFVHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- -