Pcae086738.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- stc
- Assembly
- GCA_963971545.1
- Location
- OZ020609.1:53102266-53113517[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2 1e+05 -4.4 1.6 15 19 635 639 634 639 0.81 2 12 0.17 8.5e+03 -0.7 0.3 4 10 668 674 667 674 0.94 3 12 1.4e-06 0.068 15.6 14.4 4 19 682 697 680 697 0.93 4 12 4.2e-05 2.1 10.8 12.7 3 18 735 750 727 751 0.87 5 12 7e-07 0.035 16.5 19.4 1 19 791 809 791 809 0.98 6 12 0.0002 9.9 8.7 17.7 4 18 857 871 850 872 0.86 7 12 0.037 1.9e+03 1.4 11.5 1 11 912 922 912 933 0.94 8 12 6e-10 3e-05 26.3 15.5 1 18 939 956 939 957 0.97 9 12 2 1e+05 -11.7 14.3 10 18 1004 1013 990 1014 0.69 10 12 1.4e-07 0.0067 18.8 10.7 1 17 1050 1066 1050 1072 0.89 11 12 1.8e-07 0.0088 18.4 14.0 1 19 1082 1101 1082 1101 0.97 12 12 0.67 3.3e+04 -2.6 0.1 8 12 1117 1121 1115 1121 0.84
Sequence Information
- Coding Sequence
- atgtcAACAGATCCGCCAGCTACGTTATCACAAATTTGGCAAGGAGCATTTGGAAATTCTTTAGGTGTTGCTATAACAGATGATAAAaatcaacagcagcaacaacaaaatttatttcaagcCAGCGAGTTTTCGCACAACGCTGCACCAACTATGAATGGGAGTAGAAGTAACAATAACCTTGCTTCAGTTGGCGGCGCTGCGGGAGCTGGAAACAACAATTATGttaatttcaatcaattcaTAATGCAGCACAATTTATTGGGTAATAGTGGTTTAAGTCTAAATGGAGTAAACGCTGACGTTATGATTGGAAATGGTAATGCCAATATTGGTGCAGTTGGCGGTGAAAGTTCCGTCAACGCTATAAATGCATCTAACACACAAGGCCATGTCAACAACGGTGGCGGTGTCGGTGGTTTTAATAATGATTACTACAATTTTGCCGATACGATTAGTAGTAAAATTCAGAATGGATCAGGTGGAGATGGTGCTGCTGCGGAAACTAGTCCTCATGCTACACGTACAAATCTGTTCTCCAATAGCCTATTTTCTCcatacagcaacaacagcagcctTTACTCCAACAATGGCCTTAACGATGGCGGCTACAACTCGTACAATAGcgcaaacacaaattttaattactttgatAATATTTACACGCCTTTCGGTAACAGTGGCGGCTACTACATGAACCCCTTTGCCACTGGCTTCGATTTTAATACTTCGAACTTGCAAGTCTCAGCACCAGAATTCGTACCACGTTTCAATAATCTCAGTTTAAATGAAGAACAGTTTGAGAATACCAAAACAAACAGTCAACAGAGACTTGTTGAAGCGACAACTAGCGTCACAAAGGAGGATCCAAAGAATTTTAAAGCTCCCTCTATCAATGACTTATTTCAAGAGAATCAAGGCTTGGGCCAAGTGGGAAATgataatacaattttgaatgGTGTTGAAAGTGTTGCTATTGCTACGTTTTCTGTTGATAGTAGTGGAGGTGGCGATAACGTTCCGTCGTTGACCGCAACTGCAGATAATGCAACATTGAATGtagaaaaaaattcttcaagtgcaaatttttcaataacagcacaacaacaacaacaaaaattgggCACAAAAAGCGGGCATGTAGCAGAAATGCTCGACGACAACAAACGCCAAGGTAATGGCACAAATATAATTGCCAACACTAACCTATTCAATCCAAATTCAACTGGTTCTTCATCTTCGGCTGGTGGTGGTGCTGTCTCACGTTATACTGGCACCACCAACAAGCAACAATCGTTCAACAGTAATGGCTCACGCGGATCATCATTGAATGGTTTTTCGCGAAATAGTAATGATTACACTGGCTCACCACACAGCCACGAACGCAACGGAGGAGGAGGCGGTGGTGTTGGCGGTGATACTCTTACTCCCAGCGTTGGCAATAAGCACAACAATGATGGCTTCGATAAATCGGAGAAACCCTCTACACGCGCTGAGCGTGAACGTGAGCGCGACCGAGATGCGCGCCGCTATCAAAATGGACGTCGTTCGGTCGACTATCATCGTAGTAATAAGCGACGTGATGACTGGAATCGTAATCGCGATCGTATAAATGGTTTTCGTGTAGAAGAGAAATACTCAACCGATAATGGGAAAGATAGTCCGCTACCGTCACCAGAAAagAAGTCTTCGCCGAAAAAAATTTACCCGGAAAATGAGAAATTATCACAGCGCGAGAAGCTTATACGCGACATTGAGACTCGCCGTTTGGAGTGTTTGGTTTGCGTGGAGCCCATCAAAGCCCATCATGCCGTATGGTCCTGCAACAATTGCTATCACATACTCCATTTGCAATGCATCATCAAATGGGCTTCATCATCGAAATCCGATGACGGCTGGCGTTGTCCCGCCTGTCAGAATGTCGTCAAGGAGGTGCCACGCGACTACTATTGCTTCTGTGGCAAAGTTAAGAATCCACCATACACTCGTCACGACATCGCTCATTCATGTGGTGAGATTTGCCGTCGTGTTGAAGGTTGCGTACACGCCTGCACGCTCCTCTGTCATCCCGGCCCATGTCCACCATGCCAGGCTTATGTGAAACGCGAATGCGGCTGTGGCAAGACGACCAAGACAATGCAATGCTGCCTCAAAGAGGCCATTGAGTGCGATTCAACTTGtggaaaaatgttgaattgtgaGCTCCACAAATGTCCAACTAAGTGTCACGACGGCAAGTGCGTGCCATGCGTCGAAAAGGTCGATCAGCAGTGCCACTGCACCAAGCAGGAGCGTCAAGTCGCCTGCACACGCGACTCGCACGACAAGCACACCTACTCCTGTGGCAAGCCGTGTGGCAAAGATTTGGCTTGTGGCAATCACAAGTGCAAGGACTGTTGCCATCCGGGCGAATGTCGCACATGCAAATTGAGTCCCGAGGTAGTCACTTCGTGTCCATGCGGCAAAATGCCAATAGTTGTGGGACAACGTAAGTCCTGTTTGGACGCTGTACCCGTGTGCGAGGGCATTTGCAGCAAGACACTGCGTTGCGGTAAACCAGCACATCCCCATCATTGCACCAGCAaatgtcatttgggcaattgtCCACCATGTAATAAACAGACCGCCGTCAAGTGTCGTTGCGGTCATATGGACCAACTTATCAAGTGCCGCCAATTGTCGACGCGCGCTGATGATGCCCGCTGTAAGAAGCGCTGCGTTAAGAAACGTTCATGCGGCAAGCATAAATGCAACCAAGAATGCTGCATTGATATCGATCACATCTGCCCGTTGCCATGCAATTATACGCTGTCATGCGGCAAACACAAATGCGACCAACCCTGCCACCGCGGCAATTGTCCGCCTTGCTATCGCTCATCGTTTGAGGAACTATATTGTGAATGTGGCGCCGAAGTCATCTATCCACCCGTGCCGTGCGGCACCAAGAGGCCAGTCTGCAAGCGCACCTGTTCGCGCTCTCATCCATGTCAACATGTACCACAGCACAACTGCCACTCGGCGGCCACATGTCCACCATGTATGATGTTCACAACGAAATGGTGTTTTGGTCAGCATGAGCAACGCAAAACCATTCCATGCTCACAGGAGAGTTTCAGTTGTGGCTTGGCGTGTGGCAAGGCATTAGCGTGCGGTCGCCACAAGTGTATCAAGACATGCCACGATGGTGTGTGCCAGACGACTGGCGAAGTATGCAAACAGCATTGCACCAAATTGCGCGCCACTTGCGGGCACAAATGTATGTCGCCATGTCATGATGGTGACTGCCCGGATACACCCTGCAAGGAAATGGTCGAAGTTCAATGCGAGTGCGGCAATCGCAAGCAAATGCGTTTATGCCACGATTTGGCACGCGAATTTAGTCGCATCGCCACTGCCCAATTGGCCTCTTCAATGGCCGAAATGCAACGCGGCAACTATATGGAACTAAGCGAAATTCTCGCACccgttaaaataaataagacaAATAAAACCTTGGATTGTAATGATGAATGCCGTTTGCTCGAACGCAATCGCCGTCTGGCTATTGGCCTACAAATTCGCAATCCCGATGTGCCGCAAAAACTACAAACCAAATATTCTGATTTTATACGCAATTTTGTTAAACGTGACCCAACTTTGGTCAAATCCATACATGATGCCCTAACCAATTTGGTGAAGCTAGCTAAGGAGAGTAAACAGAAATCACGCAGTCACTCATTTCCCACAATGAATCGTGAAAAACGTCAGCTGGTGCATGAAATGTGCGAAATGtttggtgtcgagtcggttgccTACGATGCAGAACCCAATCGTAATGTGGTTGCAACAGCCTACAAAGATAGGTCGTGGTTGCCTGCCACCAGCGTTATGGAAGTTATGCAGCGTGAATCCGGTCAGCGTCGTGTGCCTGTACCGAGCAACAATGCCTGGGGCATTAAGAGATAG
- Protein Sequence
- MSTDPPATLSQIWQGAFGNSLGVAITDDKNQQQQQQNLFQASEFSHNAAPTMNGSRSNNNLASVGGAAGAGNNNYVNFNQFIMQHNLLGNSGLSLNGVNADVMIGNGNANIGAVGGESSVNAINASNTQGHVNNGGGVGGFNNDYYNFADTISSKIQNGSGGDGAAAETSPHATRTNLFSNSLFSPYSNNSSLYSNNGLNDGGYNSYNSANTNFNYFDNIYTPFGNSGGYYMNPFATGFDFNTSNLQVSAPEFVPRFNNLSLNEEQFENTKTNSQQRLVEATTSVTKEDPKNFKAPSINDLFQENQGLGQVGNDNTILNGVESVAIATFSVDSSGGGDNVPSLTATADNATLNVEKNSSSANFSITAQQQQQKLGTKSGHVAEMLDDNKRQGNGTNIIANTNLFNPNSTGSSSSAGGGAVSRYTGTTNKQQSFNSNGSRGSSLNGFSRNSNDYTGSPHSHERNGGGGGGVGGDTLTPSVGNKHNNDGFDKSEKPSTRAERERERDRDARRYQNGRRSVDYHRSNKRRDDWNRNRDRINGFRVEEKYSTDNGKDSPLPSPEKKSSPKKIYPENEKLSQREKLIRDIETRRLECLVCVEPIKAHHAVWSCNNCYHILHLQCIIKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKVKNPPYTRHDIAHSCGEICRRVEGCVHACTLLCHPGPCPPCQAYVKRECGCGKTTKTMQCCLKEAIECDSTCGKMLNCELHKCPTKCHDGKCVPCVEKVDQQCHCTKQERQVACTRDSHDKHTYSCGKPCGKDLACGNHKCKDCCHPGECRTCKLSPEVVTSCPCGKMPIVVGQRKSCLDAVPVCEGICSKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQLIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPVCKRTCSRSHPCQHVPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACGKALACGRHKCIKTCHDGVCQTTGEVCKQHCTKLRATCGHKCMSPCHDGDCPDTPCKEMVEVQCECGNRKQMRLCHDLAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKINKTNKTLDCNDECRLLERNRRLAIGLQIRNPDVPQKLQTKYSDFIRNFVKRDPTLVKSIHDALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSVMEVMQRESGQRRVPVPSNNAWGIKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082598;
- 90% Identity
- -
- 80% Identity
- -