Basic Information

Insect: Anastrepha ludens
Gene Symbol: stc
Assembly: GCA_028408465.1
Location: JAPVRI010153192.1:15636-22710[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3 5.1e+04 -4.4 1.6 15 19 619 623 618 623 0.81

2 13 0.57 9.7e+03 -1.8 0.3 4 10 652 658 651 658 0.92

3 13 2e-06 0.034 15.6 14.4 4 19 666 681 664 681 0.93

4 13 3.8e-06 0.064 14.7 13.2 3 19 719 735 711 735 0.87

5 13 1e-06 0.018 16.5 19.4 1 19 775 793 775 793 0.98

6 13 0.00029 5 8.7 17.7 4 18 841 855 834 856 0.86

7 13 0.055 9.2e+02 1.4 11.5 1 11 896 906 896 917 0.94

8 13 8.8e-10 1.5e-05 26.3 15.5 1 18 923 940 923 941 0.97

9 13 1.4 2.4e+04 -3.1 0.5 6 10 970 974 969 976 0.80

10 13 3 5.1e+04 -8.1 12.3 9 18 987 997 977 998 0.73

11 13 1.5e-07 0.0025 19.2 10.6 1 17 1034 1050 1034 1056 0.89

12 13 2.6e-07 0.0044 18.4 14.0 1 19 1066 1085 1066 1085 0.97

13 13 0.99 1.7e+04 -2.6 0.1 8 12 1101 1105 1099 1105 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3	5.1e+04	-4.4	1.6	15	19	619	623	618	623	0.81
2	13	0.57	9.7e+03	-1.8	0.3	4	10	652	658	651	658	0.92
3	13	2e-06	0.034	15.6	14.4	4	19	666	681	664	681	0.93
4	13	3.8e-06	0.064	14.7	13.2	3	19	719	735	711	735	0.87
5	13	1e-06	0.018	16.5	19.4	1	19	775	793	775	793	0.98
6	13	0.00029	5	8.7	17.7	4	18	841	855	834	856	0.86
7	13	0.055	9.2e+02	1.4	11.5	1	11	896	906	896	917	0.94
8	13	8.8e-10	1.5e-05	26.3	15.5	1	18	923	940	923	941	0.97
9	13	1.4	2.4e+04	-3.1	0.5	6	10	970	974	969	976	0.80
10	13	3	5.1e+04	-8.1	12.3	9	18	987	997	977	998	0.73
11	13	1.5e-07	0.0025	19.2	10.6	1	17	1034	1050	1034	1056	0.89
12	13	2.6e-07	0.0044	18.4	14.0	1	19	1066	1085	1066	1085	0.97
13	13	0.99	1.7e+04	-2.6	0.1	8	12	1101	1105	1099	1105	0.84

Sequence Information

Coding Sequence: ATGTCGGCAGATCCGCAAGCGCCTCTATCACAAATTTGGCAAGGAGTATTTCAAAGTGCACTGGATACTGCAATAGCAGATGAAAGGaatcagcagcaacagcagcaaaccACTTTTCAAGCCAGTGAGTTTCCTCACAATCCTGGAACAATTATGAATGGGAGTAGAAGCAATAATAGTATTGCTTCAGCTGGCGGGCCCGGAGAGACaggaaataataattatgttaattttaatCAATTCATCATGCAGCATAATCTATTAGGCAGCAATAATGGTTTTGGTCATAATGGAGCTGACGTTCTAATCAGTAATGGCAATGAAAATGTTGGTGCTGTTGGCGGTAGCACTGGTAACGCAACAAACGCATCTGCCACACAAATTAACGTCaacggtggtggtggtggtggtatcGCACAAGAGAGTGCTAATAATGATTACTTCAATTTCGTCGACACAATGagtaataaaatacaaactgGATCAGGCAGAGATGATGCACCCGTAGAAAGCAGTCTGCAACCGACAAATCTTTTCTCCAATAGTCTATTTTCGCCGTATAACAACAGCAGTAGCCTTTATTCAAACAACGACCTTAGCGGTGGCGGCTACAACGCATATAATAatccaaatacaaattttaattacttcGACAACATTTACACGCCTTTCGGTAATACTGGCGGCTATTATATGAACCCGTTTGCCACTGGCTTCGATTTTAATGCATCAAATTTGCAAGCGTCTGCTCCTGAATTTGTGCCACGTTTCAACAATCTCAGTTTGAACGAGGAAAAGTTCGAAAAGTTTACACCAAATAGTCAAGGAGTTGATGAAGCTGCAGGTAGCGTTGTAAAAGAGGATCCAAAGAATTTTAAAACGCCCCCTATCAATGAAGAAAATCACTACGTACTTTGTCAAGAGCAAAATGTACATGAGGCATTTAACGGTGTTGTCGGTGGTGCTTTTGCTACTTCAGGTATTGAAGATTCTGGTCGTGATAACGCTCCGCTGACCTCTACTATAGATAATAATGCAACACTGAATTTAGTAAAAACTGATGTGAGTGCCAATTCTTCAATGCcggcacaacagcaacaaaaaatggGCACAAAAACGGAGCATGGTGCAGATATGATCGAAAACACCCGCCAAAGTAATGGCACAAATATAATAGCAAACACTAACTTGTTTAATCCACATTCAGCTGCCTCTCCATCCTCATCCGTTGGTGGTGCCGTCTCGCGTTATACTGGCTCCGCAAATAAGCAACACCTCTCCAGCGGTAATGGTTCACGAGGTTCATCATCGAATGGGTTTTCCAGAAATGGCAATGATTACAATAGTTCACCACATAACCACGAACGCAGTGCAGGTGGTGCTGGCAGCGCTAGTAAGCACAACAATGATGGTCTAGAGAAGTCGGAAAAACCTTCTGCACGTGCTGAGCGCGAACGGGAGCGTGATCGAGATGCACGTCGTTATCAAAATGGGCGCCGTTCTGTCGACTATCATCGCAGCAATAAGCGGCGCGATGATTGGAATCGCAATCGTGATCGTATAAATGGTTTTCGCGTGGAAGAGAAATACTCGACGGATAATGGAAAAGATAGTCCACTACCGTCACCGGAAAAGAAACCTTCGCCAAAAAAAGTCTACCCGGAGAATGAGAAGTTATCGCAACGTGAAAAACTCGTACGCGACATTGAGACACGTCGTTTGGAGTGTTTGGTTTGCGTTGAGCCCATCAAAGCACATCATGGCGTTTGGTCCTGCAACAACTGCTATCACATACTTCATCTACAATGCATCATCAAATGGGCTTCATCATCGAAATCAGATGACGGCTGGCGCTGTCCCGCATGTCAAAATGTCGTAAAGGAGGTGCCACGCGACTATTATTGCTTCTGTGGAAAGGTCAAGAATCCACCATACACTCGTCATGATATCGCACATTCATGTGGTGACACGTGCCGTCGTGTTGAAGGTTGTGTACACGCTTGTACCCTACTCTGCCATCCAGGCCCATGCCCCCCATGTCAGGCTTATGTGAAGCGTGAATGCGGCTGTGGCAAGACAACCAAAACAATGCAATGTTGCGTTAAAGAGGCCATTGAGTGCGATTCTATTTGTGGAAAATTATTGAACTGTGAGCTCCACACATGTCCGGCTAAGTGCCACGATGGCAAGTGCTCACCATGCACCGAGAAGGTGGATCAACAGTGCCACTGTGCCAAGCAGGAGCGTCAAGTCGCTTGCACACGCGACTCACATGATAAGCACGCCTACTCTTGCGGCAAGCCGTGCGGCAAAGATTTGGCTTGCGGCAATCACAAGTGCAAGGACTGTTGTCATCCTGGTGAATGTCGCACATGCAAACTAAGTCCCGAAATGGTCACTTCGTGCCCGTGCGGCAAAATGCCTATTGTAACTGGTCAAAGAAAGTCCTGTTTGGATCCTATATTAGTTTGTGAGGGCGTGTGCGGCAAGACACTGCGTTGTGGTAAGCCTGCACATCCTCATCATTGCACTAGCAAATGTCACCTGGGTAACTGCCCACCATGCAACAAACAGACGGCTGTCAAATGTCGTTGCGGTCACATGGACCAACTTATCAAGTGCCGCCAGCTGTCAACGCGCGCCGACGATGCACGCTGCAAGAAGCGCTGCGTTAAAAAACGTTCATGTGGCAAACATAAATGCAACCAGGAATGCTGCATCGATATCGATCACATCTGCCCATTGCCCTGCAACTATACACTATCATGTGGCAAACACAAATGCGACCAACCCTGCCACCGCGGCAACTGTCCGCCCTGTTATCGTTCCTCTTTCGAGGAGCTGTACTGTGAATGTGGCGCCGAAGTCATCTATCCACCAGTGCCGTGTGGCACCAAAAGGCCGGCCTGTAAGCGCCCTTGCTCGCGCACCCATCCCTGTCAACATCCACCCCAGCACAACTGCCACTCGGCGGCCAATTGCCCACCATGCATGATGTTCACCACCAAATGGTGTTTTGGCCAGCACGAGCAGCGCAAAACCATTCCATGCTCACAGGAGAGTTTCAGTTGTGGCTTGGCATGTGGCAAGGCGCTACCGTGTGGGCGCCACAAGTGTATTAAGACATGCCATGAGGGTGTTTGTCAGACAGCGGGCGAGGTGTGCAAGCAGCACTGCACTAAGTCGCGCGCCACTTGCGGCCACAAGTGCATGTCGCCATGCCACGATGGTGATTGCCCAGATACACCGTGCAAGGAAATGGTTGAAGTTCAATGCGATTGCGGCAATCGTAAACAGATGCGTTTATGTCATGACTTGGCGCGTGAATTTAGTCGCATTGCCACTGCCCAATTGGCTTCTTCGATGGCTGAAATGCAACGTGGCAATTATATGGAACTAAGTGAAATACTCGCTCCCGTTAAAATTAATAAGACAAATAAAACCTTGGACTGCAATGAAGAATGCCGTTTGCTCGAACGTAATCGCCGTCTGGCTATTGGCCTACAAATACGCAACCCCGATGTGCCGCAAAAACTACAAACCAAATATTCTGATTTTATACGCAATTTCGCCAAACGTGACCCAACCTTGGTCAAATCCATACATGATGCTCTAACCAACTTGGTAAAACTCGCCAAGGAGAGCAAACAAAAATCACGCAGTCACTCATTCCCCACAATGAATAGGGAAAAGAGGCAGCTGGTGCATGAAATGTGCGAAATGTTTGGTGTCGAGTCGGTTGCCTACGATGCAGAGCCAAATCGTAACGTGGTAGCTACAGCCTACAAAGACAGGTCTTGGTTGCCCGCCACCAGCATTATGGAGGTTATGCAGCGCGAATCCGGTCAGCGTCGTGTGCCGGTGCCTAGCAACAACGCCTGGGGTATcaaaagataa
Protein Sequence: MSADPQAPLSQIWQGVFQSALDTAIADERNQQQQQQTTFQASEFPHNPGTIMNGSRSNNSIASAGGPGETGNNNYVNFNQFIMQHNLLGSNNGFGHNGADVLISNGNENVGAVGGSTGNATNASATQINVNGGGGGGIAQESANNDYFNFVDTMSNKIQTGSGRDDAPVESSLQPTNLFSNSLFSPYNNSSSLYSNNDLSGGGYNAYNNPNTNFNYFDNIYTPFGNTGGYYMNPFATGFDFNASNLQASAPEFVPRFNNLSLNEEKFEKFTPNSQGVDEAAGSVVKEDPKNFKTPPINEENHYVLCQEQNVHEAFNGVVGGAFATSGIEDSGRDNAPLTSTIDNNATLNLVKTDVSANSSMPAQQQQKMGTKTEHGADMIENTRQSNGTNIIANTNLFNPHSAASPSSSVGGAVSRYTGSANKQHLSSGNGSRGSSSNGFSRNGNDYNSSPHNHERSAGGAGSASKHNNDGLEKSEKPSARAERERERDRDARRYQNGRRSVDYHRSNKRRDDWNRNRDRINGFRVEEKYSTDNGKDSPLPSPEKKPSPKKVYPENEKLSQREKLVRDIETRRLECLVCVEPIKAHHGVWSCNNCYHILHLQCIIKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKVKNPPYTRHDIAHSCGDTCRRVEGCVHACTLLCHPGPCPPCQAYVKRECGCGKTTKTMQCCVKEAIECDSICGKLLNCELHTCPAKCHDGKCSPCTEKVDQQCHCAKQERQVACTRDSHDKHAYSCGKPCGKDLACGNHKCKDCCHPGECRTCKLSPEMVTSCPCGKMPIVTGQRKSCLDPILVCEGVCGKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQLIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPACKRPCSRTHPCQHPPQHNCHSAANCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACGKALPCGRHKCIKTCHEGVCQTAGEVCKQHCTKSRATCGHKCMSPCHDGDCPDTPCKEMVEVQCDCGNRKQMRLCHDLAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKINKTNKTLDCNEECRLLERNRRLAIGLQIRNPDVPQKLQTKYSDFIRNFAKRDPTLVKSIHDALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSIMEVMQRESGQRRVPVPSNNAWGIKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081816; iTF_00083583; iTF_01190016; iTF_00091868;
90% Identity: iTF_00081816;
80% Identity: -