Basic Information

Insect: Philophylla caesio
Gene Symbol: L
Assembly: GCA_963971545.1
Location: OZ020606.1:40314758-40318222[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.41 1.4e+02 5.5 5.8 1 23 10 32 10 32 0.98

2 17 2.1e-07 7.5e-05 25.3 3.1 1 23 38 60 38 60 0.99

3 17 9.9e-06 0.0034 20.1 0.3 1 23 66 88 66 88 0.98

4 17 2.1 7.5e+02 3.3 1.4 3 23 153 175 151 175 0.86

5 17 0.0054 1.9 11.5 0.1 2 23 204 226 203 226 0.96

6 17 0.056 20 8.3 1.0 1 23 318 340 318 340 0.97

7 17 0.00089 0.31 13.9 0.4 1 23 377 402 377 402 0.92

8 17 0.026 9.2 9.3 0.0 1 20 407 426 407 427 0.96

9 17 0.062 22 8.1 0.7 1 23 437 460 437 460 0.98

10 17 0.0035 1.2 12.1 2.4 1 23 497 520 497 520 0.96

11 17 1.5 5.2e+02 3.8 0.1 1 23 694 718 694 718 0.88

12 17 0.00093 0.33 13.9 4.6 2 23 727 749 726 749 0.96

13 17 0.013 4.5 10.3 0.1 1 23 755 777 755 777 0.96

14 17 0.61 2.2e+02 5.0 1.0 2 23 785 806 784 806 0.96

15 17 0.6 2.1e+02 5.0 1.0 2 23 903 924 903 924 0.94

16 17 0.0019 0.65 12.9 0.6 1 23 934 956 934 956 0.97

17 17 0.04 14 8.7 1.7 1 23 963 985 963 985 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.41	1.4e+02	5.5	5.8	1	23	10	32	10	32	0.98
2	17	2.1e-07	7.5e-05	25.3	3.1	1	23	38	60	38	60	0.99
3	17	9.9e-06	0.0034	20.1	0.3	1	23	66	88	66	88	0.98
4	17	2.1	7.5e+02	3.3	1.4	3	23	153	175	151	175	0.86
5	17	0.0054	1.9	11.5	0.1	2	23	204	226	203	226	0.96
6	17	0.056	20	8.3	1.0	1	23	318	340	318	340	0.97
7	17	0.00089	0.31	13.9	0.4	1	23	377	402	377	402	0.92
8	17	0.026	9.2	9.3	0.0	1	20	407	426	407	427	0.96
9	17	0.062	22	8.1	0.7	1	23	437	460	437	460	0.98
10	17	0.0035	1.2	12.1	2.4	1	23	497	520	497	520	0.96
11	17	1.5	5.2e+02	3.8	0.1	1	23	694	718	694	718	0.88
12	17	0.00093	0.33	13.9	4.6	2	23	727	749	726	749	0.96
13	17	0.013	4.5	10.3	0.1	1	23	755	777	755	777	0.96
14	17	0.61	2.2e+02	5.0	1.0	2	23	785	806	784	806	0.96
15	17	0.6	2.1e+02	5.0	1.0	2	23	903	924	903	924	0.94
16	17	0.0019	0.65	12.9	0.6	1	23	934	956	934	956	0.97
17	17	0.04	14	8.7	1.7	1	23	963	985	963	985	0.96

Sequence Information

Coding Sequence: atgtatAGTCATGCCGAGCATTTGCCTTTTAAGTGTGATTATTGTGCTCGACTTTTTAAGCACAAAAGGTCAAGAGATCGCCATACTAAGCTCCACACTGGTGATCGTAGATATCGCTGCCCACATTGTGAGGCTGCCTTTTCTCGAAGcGATCATCTAAAAATTCACATGAAAACGCACGATAATCAGAAACCATTTCAATGTACAATATGTAACCGCGGATACAACACCGCGGCTGCGTTAACATCACATATGCAAAATCATAAAAAACAGGCAGCTATTCTAGCGGCTGGGGGAAATCCCCAAGAACTTAATTATAGTCCTCGCTCAAGTGGATCCATTTCCAGTAGTGGTAGTTTTCATAGGAGGCGGTGTGCAACGGCAATTATAAACTCGGAAAGTAAATCTAACCGATTGGATTGTCCAAAGCGGTCGCGAACTGTGACTCTCTTAGCCTGTAATTTTTGTTCCAAGTCCGAGTTCAACTCAATTGAACAGCTTAAAGTACACATTCACACAAAACATGAGAAAGAAGTGTTTTCCTCCCAAAATACACAAATGCTTGCAAACCTTGATATCACTGCTCCGGAATCGAATCCCTTCCAATTGAGGTGTGAGTATTGTACAATGCAATTTGGAAGTCTCCCTGCATTATTTCAGCATATACGTCTCGCACATGTCGATCGTTTGGCTAGCCCTAACTCGTACTTTGAACATTTTAATCGTTTAGCTGCATCAGGCACCTTTAGTCCTCGCTTGGTGGGTGATAAAACGATTTTGCGGGAAGACAGGGCCGCaaaggaaaataatattaagatAGAACAAACTGTGCAATGCTCAGGAAATGCAAGCGAAGAAAAACAGGAGGAAAAGCCCACTGATCTTAGTAAAAACAATCGTCGCTCAACTACTCCTGTTTCGCTTCCTGAGGAATGTATACAGCCTGACATGTTTTTTTGCAATCAATGTAATGCCGGCCTACCAGATTTTGAAAAGTTCCGTAATCATTTGAAAACGCACCTTACTCGAGgtttaaatcttatttgtcACCATTGTGGCTTCGCATCACAGGAAGAATCGGAGCATGAGCGTCATGTGATCTCACACTATCTTTTATCCAGTTCCGAATATGTATGCGCGAGCACCGTGTGTGACAAATCGTATACAAACCTTGAGGAGCTTCATAATCATATATTAGATCAGCATGCAATTCCTATGTATAAATGTGATGTATGTTCCGAATTATTTGATTCAAAATCGGCTATTAAAATACATATCGCTTGTACTCATTCCGTTGGAACTAAGTTATTTCGATGTTCTATCTGTATGGAATTACTACGATCGGAGAGTGAGTTTAATACGCATATCAAAACCAGTCACCCAGGCATTAATGGTCCGATACAAAATTCCCTACAATGCTTGTTTTGTAGAACTGTATGTGCAAACGATTTAGAAATGCATTTTCATCTTGCTGCACATGCTCGTCAATTCCAATGTCCCTTATGCCCAGAAACCTTTCATGTGGAGTTTCTATTGGATCGACACATGCAACATCGTCATACAAGCAACGATCGTACGCCAGTAACTTCGAAaggaaattttgatgaaagttCAGCACCAACTAATATGCCGAATCAAATGAACTCCCTCTATATGAACGCTTTACTTACGAAAGCGCCACAGATGCCAATTTCCTCACtaaacaacaacaccagcatTCTCGACTACAATATTGCATTTGCAGCTCATCTTAATAAAAGCCTTTTTCATAGTTCCATTCCAGCAGGAACTTCGCTGACCGACGATAAGTTCTATAATGCACTGCAAGTTGATACAGGGGTCGTGAAACATCCGGGGCTCAGGTATAGCCTCAGCCAACGGTACTTCGATACAAGCAGATCGCTAATAGAAATGTATTCGCAACAACGAATAGACAAACCGACATCGGAAAATTATTGCAATGGTCCAAAGCCACAGCCTGTTACACAGTATCTGAAATCTCAATCGGATTTACATTCAAACCGATCGTCAGCGGAATCAACAATTCAAACCTCTGTGGGGCTAAACTCTTCTATAGGTTATAGCTGTGATATTTGTGAACGAAATGATTTTCGATCGGAGGGTGAGGTAAACTCGCATCGTAAAATTGCACACAATTTGAAAACGGGAGTAAGTTTGCGATGCGCCTACTGCTCGGGAAATTTTAAATCACGTAGTGAACTGGAACATCATATGAAAACATGCCACAATTCAACTGGAAAGCATAAGTGTCTGATttgtgatgaaatttttccatcGCCTGCTGTATTAGCAGAACACAAACTGCAACATTCGAAAATTGGTCAGTCTGGAAAATGTTCACACTGCAGTAAAATCTTAGATGGTGTTACGTCTTTCAAAGATCATCTTAATGAGCATAACAATGAGAGCCAACTTCCAATGCAATGTATCTGCTGTAGGCAATCACTCCACTCCGATTTCGAGATCAGTTTACATGCGCAATTCCATACAAAACCTTCCAGCCACCCAGAAAGCGCGTGTGCTCTTTGCTTGCAGCCCATACCCATACCTACGAATGGAGAAGCTAAAGTGTGCGAAAAGTGCTGCCGAAAGCATAAATTTGGCTCCAAATTTTCTATTCAATATTTAAGAAGCGAGCTTGGACACGGCCCTGATCTTGGTCAAAGAATCTTGAAAACTGAAGAACGTTGCAATATCTGCAAACTGATGCTACCGCATACACAAAAACTGCAAGAACATTTGGTGGAGCACACCTTTGCCGGTTGTGAAGATCGAGGTTTCAGCTGCTACATATGCTCTGCCGTATTTACTATCGCAAGTAGTCTGCTAACCCATATGCATGAGCATGGACTTCAGAGTCGGCCTTATGATTGTAATATTTGCACTGATAAGTTCTTTTTTCGTGCCGAGCTGGAACATCACCTGCTGTCCCATGAAATCCCAGATGCGATTGAGTTGAGAAACACTGACATTTGTAACGATAAAGTCTCTTTACCCAGAGAAAGTGATAATTCCGAGGTCTATTTGACCGAGGTGAAAAAGGAACTCCCCGTGGCTGACGAAAAAGCGAAAACAGGAGAAGAAGATGAATAcgttgaaattgaaaatatttctgaTGCGAATCAGACATATAATCAGAAACACCAATGTTACATCACCAGTGAGAAAGACGtttaa
Protein Sequence: MYSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQELNYSPRSSGSISSSGSFHRRRCATAIINSESKSNRLDCPKRSRTVTLLACNFCSKSEFNSIEQLKVHIHTKHEKEVFSSQNTQMLANLDITAPESNPFQLRCEYCTMQFGSLPALFQHIRLAHVDRLASPNSYFEHFNRLAASGTFSPRLVGDKTILREDRAAKENNIKIEQTVQCSGNASEEKQEEKPTDLSKNNRRSTTPVSLPEECIQPDMFFCNQCNAGLPDFEKFRNHLKTHLTRGLNLICHHCGFASQEESEHERHVISHYLLSSSEYVCASTVCDKSYTNLEELHNHILDQHAIPMYKCDVCSELFDSKSAIKIHIACTHSVGTKLFRCSICMELLRSESEFNTHIKTSHPGINGPIQNSLQCLFCRTVCANDLEMHFHLAAHARQFQCPLCPETFHVEFLLDRHMQHRHTSNDRTPVTSKGNFDESSAPTNMPNQMNSLYMNALLTKAPQMPISSLNNNTSILDYNIAFAAHLNKSLFHSSIPAGTSLTDDKFYNALQVDTGVVKHPGLRYSLSQRYFDTSRSLIEMYSQQRIDKPTSENYCNGPKPQPVTQYLKSQSDLHSNRSSAESTIQTSVGLNSSIGYSCDICERNDFRSEGEVNSHRKIAHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAVLAEHKLQHSKIGQSGKCSHCSKILDGVTSFKDHLNEHNNESQLPMQCICCRQSLHSDFEISLHAQFHTKPSSHPESACALCLQPIPIPTNGEAKVCEKCCRKHKFGSKFSIQYLRSELGHGPDLGQRILKTEERCNICKLMLPHTQKLQEHLVEHTFAGCEDRGFSCYICSAVFTIASSLLTHMHEHGLQSRPYDCNICTDKFFFRAELEHHLLSHEIPDAIELRNTDICNDKVSLPRESDNSEVYLTEVKKELPVADEKAKTGEEDEYVEIENISDANQTYNQKHQCYITSEKDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081607;
90% Identity: -
80% Identity: -