Basic Information

Gene Symbol
Zfy1
Assembly
GCA_963971545.1
Location
OZ020608.1:1347759-1349831[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 4.2e-06 0.0015 21.2 2.2 1 23 196 218 196 218 0.98
2 11 5e-07 0.00017 24.2 2.4 1 23 224 247 224 247 0.97
3 11 4.6e-05 0.016 18.0 0.7 1 23 253 275 253 275 0.98
4 11 5.4e-05 0.019 17.8 2.0 1 23 281 303 281 304 0.95
5 11 1.4e-07 4.8e-05 25.9 0.3 1 23 311 333 311 333 0.98
6 11 0.0012 0.43 13.5 1.0 1 23 339 362 339 362 0.96
7 11 0.086 30 7.7 0.5 1 23 368 389 368 389 0.94
8 11 0.0001 0.035 16.9 2.0 1 23 395 417 395 417 0.98
9 11 1.5e-05 0.0051 19.5 0.8 1 23 423 445 423 445 0.99
10 11 0.021 7.3 9.6 1.5 1 23 451 476 451 476 0.95
11 11 0.0004 0.14 15.0 2.1 1 21 482 502 482 508 0.97

Sequence Information

Coding Sequence
ATGAACAGTCGTCGCTCTGCCTCCAAAGAAGATGTCACCGACAGCGGCGTTTCGCTCTCCTCGCCGCCAGCAGCGCGCACGTATCTCGGCGATGGCGAGGAGCCACCAGAAACGACGGCGGCTGCCAAGAAGAAGCTACTCCGCCGACGTGTTAGTTCggcaaaagcaacaaaaaggCTGAACAAAAACAAACGATCATCGGCCGAAGCTGCGCCAGGCACGAAGAAGCCGAAGGTTAGTCATTCATCAAATTCAGCGATGGGCAAGAGCAATTCAGCAGATGCCGAAAGTCATTCAGTGGCAGATCTCGTCATGGATTTGGAAGTGCTGAGTCCAAACTCAGTACTTGTTGTAGACTCAATTGATACTTTAGAGAAATCTATTACCGTTGCTGTTGTGGCTACGGAGCAAACTATTTCGATCGCTGATTCAGCATTCTCCGAAACAGATGTCACACAATCAGCCGCCGATTTATCAGACATAACGAACTCAGCATGCGACTCGGCACTCTCAACCGGAGACTTAGCTACAGTGGCCACGCCAGAGCCATCAACCTCCGCTGCCAACAAACGTACGCGCCAAGTTTATATTTGTCATGTGTGTTCCAAGCAATTTCGCGGCAAAAATGATCTACGGCGTCACATGCTCATCCACTCGGACGAACGTCCGTACAAGTGCGAACAATGCGGCAAATGCTACAGGCAATCGGTTAATCTGAGGAATCACATCACCTCCGCACATGAGAGCCTCAGGCAGTTCTCCTGTTCACAATGTCCGAAGATGTTTGCTTTGAAGGGCCGTTTGCGGCTGCATATGCGACTGCACTCGGGCGAGAAGCCATACGCATGCAGCCAGTGCGAGAAGCGCTTTGCTCGTGGCGGTCATTTGCAGCAGCACATCATCAGCCATCATAAAGGCAGCACCAAGCAATATGTTTGTGAGAAGTGCTCCACGGCCTTCTCGACGCCCTCTAATTTGCGTGCGCACATGGACCGCCACGAGAACGGGCCCGAACACTATTGCGAGATATGCAAGGAGCACTTTCCGAACGAGCCCGTTCTCAGGGCACACATCAACAAGCTACACTACAAGTTGGGACAATTCGATTGCGAGATCTGCAAGAAGACCATCGAGGATGAAGCCCTGGCCCATCACATGAAGATGCACACGAATGTCAAGGCGCACGTTTGCGAGGTGTGCAAGGCATATTTCATGCAGAAATCGCAGTATAACGTGCACATGCGCATGCACACAGGCGAGCGGCCGTACCAGTGCAGGATTTGCTGGCAAACTTTCGCCTACTCGAGCGTCCTAAAGCTGCACATTCGCAAGCACACAGGGGAGAAGCCGTTCCAGTGTTTGCTGTGCAAAGATGTGGTGGCCTTCTCACAGCTGGCACACTTTAAAACACACATGAAGAAAATACACAAGCACAGCAATCCGTACATGTGCGAGGGCTGTCAGCAGTTCTTCAAAGTCAAGGCGGAACTTCAGGCACATATGCAACAATGCAGCAGCTGCAATGTCGATGTGGAGCATCAGAATGCCCAGAATAACGACATGCAAACACTTTCGCATCTGCGATTCCTAATGGCCTTGCTGCTGAAGAAAATCTCGTCGCCGCAGAAATTACAGCAGCTGGGCTACGAGAAGCGCCTGATCGATAATGTGGTAGTGGCATCGCTGAAGTTGGCCAATCGCAAGGCGTGCGAGGATCAGACGCTGTCGGCGATCGAACGTATGCGACAGAATGTCGAGGAGTTTCTCAGCTGGATTGTGCCTGCTAAGGCGATGGAGACATTCCGTGAGGAGCAGCAATCCGTGGAAAGTGTATTGGATAAAATTGTCACTATGTACATGAAGCACAAATGA
Protein Sequence
MNSRRSASKEDVTDSGVSLSSPPAARTYLGDGEEPPETTAAAKKKLLRRRVSSAKATKRLNKNKRSSAEAAPGTKKPKVSHSSNSAMGKSNSADAESHSVADLVMDLEVLSPNSVLVVDSIDTLEKSITVAVVATEQTISIADSAFSETDVTQSAADLSDITNSACDSALSTGDLATVATPEPSTSAANKRTRQVYICHVCSKQFRGKNDLRRHMLIHSDERPYKCEQCGKCYRQSVNLRNHITSAHESLRQFSCSQCPKMFALKGRLRLHMRLHSGEKPYACSQCEKRFARGGHLQQHIISHHKGSTKQYVCEKCSTAFSTPSNLRAHMDRHENGPEHYCEICKEHFPNEPVLRAHINKLHYKLGQFDCEICKKTIEDEALAHHMKMHTNVKAHVCEVCKAYFMQKSQYNVHMRMHTGERPYQCRICWQTFAYSSVLKLHIRKHTGEKPFQCLLCKDVVAFSQLAHFKTHMKKIHKHSNPYMCEGCQQFFKVKAELQAHMQQCSSCNVDVEHQNAQNNDMQTLSHLRFLMALLLKKISSPQKLQQLGYEKRLIDNVVVASLKLANRKACEDQTLSAIERMRQNVEEFLSWIVPAKAMETFREEQQSVESVLDKIVTMYMKHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
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80% Identity
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