Pcae079618.1
Basic Information
- Insect
- Philophylla caesio
- Gene Symbol
- KLHL2
- Assembly
- GCA_963971545.1
- Location
- OZ020608.1:100222151-100223837[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-14 5.1e-11 44.5 0.0 2 39 339 376 338 381 0.92 2 3 0.02 29 6.8 0.0 23 37 407 421 397 427 0.83 3 3 1.5e-17 2.3e-14 55.2 0.0 3 41 449 487 447 489 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTGAAATGGATGGGCCATTCGGCAACAATTTTCGATATACAAAGGAATCTAAGGAATGATCCACAGAGCTGTGAGGTGACACTGGTGGCTAAAGATCACTCGGTGCGGGCACATCGGTTCGTTCTTTCATCATGTTCAGACCTGCTCCGCAATCTACTGGTGGATGTACCGATGGGACAGGAAGCTACAATTGTTGTGCCAGACATTAAAGGTTCGCTGTTGGAGAGTGTATTGGCTTTTATTTACATTGGTGAAACAAGTCTTACATCAACCAACTTATCGGAATTCCTAGAAGCTATTAATACCTTGGGTATAAAGTCCGCAATAAGTTTCGAATGCAACAATGCTACACTGACTGGTGCCGTTCCATCAACAGCAGTTCCTGTGAAATCTTTAAGTAATATACAAATTGCCCAAGAGGAACTAATCGAACAACAAGAAAATATTGCTGTTGAGAAAATCGAGgcGCAAAATGTTATTCAGCATGAGCGAGAGTTGGAATTTTTGGATGTCTACAACGAAACTCAACACAGTAAAATAACCTACTCCATCGAACACATGCCAGTCGCCAGCACTGCAAATGAGTATATATTAACAGAAAACTCTGGAACATTCACCTTGACGCAAAATAATAAACTTGAAAATGCATCCAACTCCGATTCTGAAAAATTGGTGGAAATGGAAGATAATACTGAAGATGGCCAAATCATAGAAGAATATAGTAGTAATAGCACCGATCCTATAATAGAGATAGCTGCTAATACTGCAACAACAAGCACTCCGAAAGCCACTGCAACTTCAACACATTCTCAATTGGCGCAGCCacttattcaaataaaatcagcaccaaaaattaaaacaattaaaattaaatcacaaTCCAATTCGGAAAGTGATCAGATGCAGCAATCAATGTATACAGCACTTGACCCTACCGCAGATCCAATTTCGGTATTAAAGACTGAGGATACTTATGGTGCTCTAAATGCTGCTCCGGGTACCCCTGAAGATgcattattttatgctgttcaGGCAGTAATAAATGAAGGCATGAGTTTACAAAAGGCTGCACAAAAGTATGATCTTTCAAAAACAGTTCTGTGGCGGAGAGTACGCAAATACCCCAACTATAGGAAAACTACCCGAGAAAATCCAGTCCTTACCATGGCGTACGAACGTTTAAAAGGTGGTGACTCACTAAAGAATATTAGCCGCGAGTTGGATATACCTATGTCAACACTACATCGACATAAGGTTCGTTTAGCACAACAAGGGCGTCTGCCGGATTATGTATCTTTTAAGAAACGTGATGTAAACTCGAAGATAGAATTGAAGGACAAACTAACAAAGGCCTTGCATGCTTGTGTTCATGAGGGAATGTCGCAGAATCATGCTGCAAATCTATATGATATACCGAAAAGCACTCTTTGGCGCCATCTACAAAAACGTGTGGCCGAAGCTGAGCTTTCGCAAAAACTCGAACAGGGGCACATCAAGGAGGAAGTTATATTATCATAA
- Protein Sequence
- MNHLKWMGHSATIFDIQRNLRNDPQSCEVTLVAKDHSVRAHRFVLSSCSDLLRNLLVDVPMGQEATIVVPDIKGSLLESVLAFIYIGETSLTSTNLSEFLEAINTLGIKSAISFECNNATLTGAVPSTAVPVKSLSNIQIAQEELIEQQENIAVEKIEAQNVIQHERELEFLDVYNETQHSKITYSIEHMPVASTANEYILTENSGTFTLTQNNKLENASNSDSEKLVEMEDNTEDGQIIEEYSSNSTDPIIEIAANTATTSTPKATATSTHSQLAQPLIQIKSAPKIKTIKIKSQSNSESDQMQQSMYTALDPTADPISVLKTEDTYGALNAAPGTPEDALFYAVQAVINEGMSLQKAAQKYDLSKTVLWRRVRKYPNYRKTTRENPVLTMAYERLKGGDSLKNISRELDIPMSTLHRHKVRLAQQGRLPDYVSFKKRDVNSKIELKDKLTKALHACVHEGMSQNHAANLYDIPKSTLWRHLQKRVAEAELSQKLEQGHIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01357850;
- 90% Identity
- iTF_00303738;
- 80% Identity
- iTF_01189626;