Ppla072712.1
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- -
- Assembly
- GCA_963971165.1
- Location
- OZ020194.1:83745839-83748247[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.42 4.7e+03 -0.3 0.0 22 32 569 579 561 583 0.74 2 4 9.4e-05 1.1 11.4 0.1 18 33 591 606 586 607 0.84 3 4 0.00065 7.3 8.7 0.0 12 34 613 635 609 637 0.74 4 4 0.012 1.4e+02 4.6 0.3 1 14 680 694 680 700 0.90
Sequence Information
- Coding Sequence
- ATGAAAACTTTAGATTTAGAGAAAGAGTCTAATAGGAAACAAACAATTGAGCAACTTGCAACATCCATCAGTAATTGTGAGAAATTTGATCAACAGAACCATAATTCACCATCTGTTGCTAAAATGATTAAAGGAGGTTTGCGAACAGATGCAGTTTCTACACACTGTTTTGGAACAATTCTACCATCACCAGTCATCcgaaattttgataaaaagttAGTTATTATTCCATTAGAAGCGAACATTCCTGACAATAGTTCTTCTACAGTTACGTTATTTACCGCTTTACCGGACCAGGTCCTTGAAAAGCAGAAAACAACAACTCCGGAAACCCCaacgaaaaatttaattttagagaaaaagtataATAAGCAACAAAACGTTAAGCAACTTGCGAGTTCAGTATCTAAATCCGTCGGTGGTTTCGAAAAATTCGACCAAAAGATCGTCAGTAGTTCAACCACTTCTGACTCAACAGCTAGTACTGCAGGTGTTAAAAGAGGTTTGCAAATATTTGGTAATTTAAAATCTAATTCCtttcgaaaaattttaccaaaaccAATCATCCAtgattttgataaaaatttaagtactgcCACATTCGAAGCTAAAATTCCTAACGATAGTTCTCCTAAAAACGCGTTATTTACTGCTGTACCAGACCAGTTATGCTATACGGAACTCACGATGCATAGATGCTTTCATACTCAGAATGATAATGATGATGTAAGAAACATTGGTTTAAAAGGAGAAATGGAAGAtccatttaatttaattacgcTCCTTTCAAATGCAGAAAAAGCTACTAAAGAAATTACAGAGAAAGTTTTAGAACATGTTTGTGAGAGTCGAGACAGAAATAGTGGAGGGGTAGAACAGATAAAAGCTAACTTGGAAAACTTAAAAAACTGTATAAAGAACTCCAGTAACACTTACCATAAAGAAGGAGTTagtgttgaaattaaaaataaaagtttattgaatgaaaaatcaatACCGTTCGATGATACTCAACAGACAAATATTGACTtggaaaatatgaataaatctGCAAAGGGCCCTGGGGAAACTTGCCATAAAAAAGCAGTTTgtgttaaaatggaaaatacaaCTTTATTGGAAGAAGAATCAATACAGTCCGATGATACtcaacaaataaataatgacTTGGAAAGCACGAATAAATGTATAAAGGACTCCAGTGATGCTTACCATGAAGACGAAGTTAGTTTCGAGACGGAAAATAAAAGATTATTGCAAGAAAAACCAATACAGTCCGTAGTAGGAATTAGCGTAGAGGCGGATGATACTAGTTTATTTAAGGACAATTTTATAAAGTCGGATGTAgaagaaatatttgatgttCAAGTGAACAATGAAAGTTTGTTTGAAAAAAAGGCGATACCGGCATCTGATGAAACAGGCGAAGCTGCGGCCATTTGTATTTATTGCCTGCAGGAAATACCAAAAACCCAGTTGCTACATCACGAAAATTACGCGTGCAGTGCAAAAAATGACAACGTCATAATAATAGATAGTAATGCTGGTTACCAAGCGAATAATAGTAATAGAACTAGAAGAAAACAAACTACATTTGTTAATTTGTACTCAAAAACCGTTTGTTGTTACTGTTCGCAACTTGTTTTGGAAACTGAACTATAttctcatattttaataaaccacAAGCGAGGTGGCCATGAGCCCTTTTGTGACATATGCGGCATTTTTGTAAAAGATAGGTTTCATCGTCACAAGGCTACTCATGCAAATAGCAGCCAGTTTTTATGCGAACAGTGCGGCTTGACGTTTAAATTAAAACCTTGGTTGACCAAGCACATGGATCGCGCGCACTCAGAGAAAAAGATTATCTGTGAGCAGTGCGGCATGATGTTTCGAACTACAACgcgtttaaaaattcatatgtTGGTTCATTCTACTTCTCGCAGACACAGCTGTCCCACTTGTGGAAAAGCTTTCAAGGCTGATTCTAATTTAAAAGTGCACATGAGAACTCATATGGATGTCAAACCGTTTACGTGTAGCGTTTGTAAGAAATCGTTCATTACTAAGCAGTGGAGAGACAAACATATGAGTagtcatatttaa
- Protein Sequence
- MKTLDLEKESNRKQTIEQLATSISNCEKFDQQNHNSPSVAKMIKGGLRTDAVSTHCFGTILPSPVIRNFDKKLVIIPLEANIPDNSSSTVTLFTALPDQVLEKQKTTTPETPTKNLILEKKYNKQQNVKQLASSVSKSVGGFEKFDQKIVSSSTTSDSTASTAGVKRGLQIFGNLKSNSFRKILPKPIIHDFDKNLSTATFEAKIPNDSSPKNALFTAVPDQLCYTELTMHRCFHTQNDNDDVRNIGLKGEMEDPFNLITLLSNAEKATKEITEKVLEHVCESRDRNSGGVEQIKANLENLKNCIKNSSNTYHKEGVSVEIKNKSLLNEKSIPFDDTQQTNIDLENMNKSAKGPGETCHKKAVCVKMENTTLLEEESIQSDDTQQINNDLESTNKCIKDSSDAYHEDEVSFETENKRLLQEKPIQSVVGISVEADDTSLFKDNFIKSDVEEIFDVQVNNESLFEKKAIPASDETGEAAAICIYCLQEIPKTQLLHHENYACSAKNDNVIIIDSNAGYQANNSNRTRRKQTTFVNLYSKTVCCYCSQLVLETELYSHILINHKRGGHEPFCDICGIFVKDRFHRHKATHANSSQFLCEQCGLTFKLKPWLTKHMDRAHSEKKIICEQCGMMFRTTTRLKIHMLVHSTSRRHSCPTCGKAFKADSNLKVHMRTHMDVKPFTCSVCKKSFITKQWRDKHMSSHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01188811; iTF_01188832; iTF_01189050;
- 90% Identity
- iTF_01188811;
- 80% Identity
- iTF_01188811;