Ppla072713.2
Basic Information
- Insect
- Philopedon plagiatum
- Gene Symbol
- -
- Assembly
- GCA_963971165.1
- Location
- OZ020194.1:83753945-83756389[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.014 1.6e+02 4.4 0.0 16 33 575 592 571 595 0.85 2 4 0.00021 2.4 10.2 0.1 17 33 602 618 597 619 0.86 3 4 0.0011 12 8.0 0.0 17 34 630 647 622 649 0.74 4 4 0.0041 46 6.1 2.1 1 14 692 706 692 712 0.85
Sequence Information
- Coding Sequence
- ATGAAAACTTTAGATTTAGAGAAAGAGTCTAATAGGAAACAAACAATTGAACAGCTTGCAACATCCATCAGTGATTGTGAGAAATTTGATCGAAAGAACGGTAACAGTTCAGCCACTTCTAATTCACCATCTGTTGCTGAAAGTATTAAAGGAGGTTTGCGAACGGATGcagtttctaatttaaattataaccCTTTTGAACCAATTCTACCATCACCAGTCATTcgaaattttgataaaaagttAGTTACTATTCCATTAGAACCCAACATTCCTGACGATGGTTGTTATACAATTACGTTATTTACCGCTTTACCGGACCAGGTCCTTCAAAAGCAGAAAACAATTACTCCGGAAACCCaaacgaaaaatttaattttagagaaaaagtataATAAGCAACAAAACATTAAGCAAGTTGCGAGTTCCGTATCTAAATCCGCCGGTGGTTTCGAAAAATTCGACCGAAAGATCGTCAGCAGTTCAACCACTTCTGATTCAACAGCTAGTGCTGCAGGTGTTAAAGGAGATTTGCAAATATTTGGTAATTTAAAATCTAATTCCtttcgaaaaattttaccaaaagcAATCATACAtgattttgataaaaatttaagtaatgcCACATTGGAAGCTAAAATTCCTAACGATAGTTCTCCTAAAAACACGTTATTTACTGCTGTACCAGACCAGTTATGCTATACGGAACTTACGATGCATAGATGCTTTCATACTCAGAATGATAATGATGATGTAACAAACATTGGTTTAAAAGGAGAAATGGAAGATCCATTTAATTTAATAACGCTCCTTTCAAATGCAGAAAAGGCTACTAAAAAAATCACTGAGAAAGTTTTAAAACATGTTTGTGAGAGTCGAGACAGAAATAGCGGAGGGGTAGAACAGATAGAAGCTAACTtggaaaacataaaaaaatgtataaagaaTTCCAGTAACACTTATCATAAAGAAGGAATTagtgttgaaattaaaaataaaagtttattgaatgaaaaatcaatACTGCTCGATGATACTCAACAGATAAATATTGACTtggaaaatatgaataaatttGTAAAGGGCTCCAGTGAAACTTACCATAAAAAAGCAGTTTGTgttaaaatgaaaaacaaaagtttACAGGAAGAAGAATCAATACAGTCCGATGATACTCAAGAAATAAATGAAGACTTGGAAAACATACATAAATGCATAAAGGATTTCAGTGATGCTTACCATGAAGACGAAGTTAGTTTTGAGAcgaaaaataaaagattattgCAAGAAAAACCAATACAGTCCTTAATCGGAATTAGCGTAGAGGCGGATAGAAGTTTATTTAAGGACAATTTTATAAAGTCGGATGTAgaagaaatatttgatgttCAGGTGAACAATGAAAGTTTGTTTGAAAAAAAGGTGATACCGGCATCTGATGAAACAGGCGAAGCTGCGGCCATTTGTATTTATTGCCTGAAGGAAATACCAAAAACCCAGTTGCTACATCACGAGAATTACACGTGCGGTGCAAAAAATGACAACATCATAGTAATAGAAAGTAATACTGGTTACCAAGCGAACACGAATAAAGTTAAAAGTCGTAATAGAACTAGAAGAAAACAAACTACATTTGTTAATTTGGACTCAAAGACCGTTTGTGGTTACTGTTCGCAACTTGTTTTGGAAAATGAACTACAttctcatattttaataaaccacAGGCGAGGCCACGAGACCTTTTGTGAAATATGcggaatttttgtaaaaagtaGGTTTAATCGTCACAAGGCTACTCATGCAAATAGCAACCAGTTTGTATGCGAACAGTGCGGCTTGACGTTTAAATTAAAACCTTGGTTGACCAAGCACATCGATCGCGCGCACTCAGAGAAAAAGATTATCTGTGAGCAGTGCGGCATGATGTTTAGAACCACAACGCGTTTAAAAATGCATATGTTTGTTCATTCTACTTTTCGCAGACACAAATGTCCTACTTGTGAAAAAGCTTTCAAGGTTGGTTTTAATCTGAGAGTGCACATGAGAACTCATATGGATGTCAAACCGTTTAAGTGTAGCGTTTGTAAGAAAACGTTCACGACTAAGCAGTGGCGAGACAAGCATATGAGTActcatatttaa
- Protein Sequence
- MKTLDLEKESNRKQTIEQLATSISDCEKFDRKNGNSSATSNSPSVAESIKGGLRTDAVSNLNYNPFEPILPSPVIRNFDKKLVTIPLEPNIPDDGCYTITLFTALPDQVLQKQKTITPETQTKNLILEKKYNKQQNIKQVASSVSKSAGGFEKFDRKIVSSSTTSDSTASAAGVKGDLQIFGNLKSNSFRKILPKAIIHDFDKNLSNATLEAKIPNDSSPKNTLFTAVPDQLCYTELTMHRCFHTQNDNDDVTNIGLKGEMEDPFNLITLLSNAEKATKKITEKVLKHVCESRDRNSGGVEQIEANLENIKKCIKNSSNTYHKEGISVEIKNKSLLNEKSILLDDTQQINIDLENMNKFVKGSSETYHKKAVCVKMKNKSLQEEESIQSDDTQEINEDLENIHKCIKDFSDAYHEDEVSFETKNKRLLQEKPIQSLIGISVEADRSLFKDNFIKSDVEEIFDVQVNNESLFEKKVIPASDETGEAAAICIYCLKEIPKTQLLHHENYTCGAKNDNIIVIESNTGYQANTNKVKSRNRTRRKQTTFVNLDSKTVCGYCSQLVLENELHSHILINHRRGHETFCEICGIFVKSRFNRHKATHANSNQFVCEQCGLTFKLKPWLTKHIDRAHSEKKIICEQCGMMFRTTTRLKMHMFVHSTFRRHKCPTCEKAFKVGFNLRVHMRTHMDVKPFKCSVCKKTFTTKQWRDKHMSTHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189051;
- 90% Identity
- iTF_01188832;
- 80% Identity
- iTF_01188832;