Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020193.1:809265-814325[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00056 0.11 15.4 5.2 1 23 216 238 216 238 0.97

2 11 7.2e-05 0.014 18.2 1.3 1 23 244 266 244 266 0.98

3 11 9e-05 0.018 17.9 0.7 1 23 272 295 272 295 0.95

4 11 0.017 3.2 10.7 3.5 1 21 301 321 301 323 0.95

5 11 0.00027 0.052 16.4 1.9 1 23 329 351 329 351 0.99

6 11 0.0002 0.039 16.8 0.5 1 23 357 379 357 379 0.98

7 11 0.00068 0.13 15.1 1.4 1 23 387 410 387 410 0.97

8 11 0.00019 0.037 16.9 2.5 2 23 417 438 416 438 0.96

9 11 0.00036 0.071 16.0 0.3 1 23 444 466 444 466 0.98

10 11 2.7e-06 0.00052 22.7 1.8 1 23 472 495 472 495 0.96

11 11 7.4e-07 0.00014 24.4 1.8 1 23 509 531 509 531 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00056	0.11	15.4	5.2	1	23	216	238	216	238	0.97
2	11	7.2e-05	0.014	18.2	1.3	1	23	244	266	244	266	0.98
3	11	9e-05	0.018	17.9	0.7	1	23	272	295	272	295	0.95
4	11	0.017	3.2	10.7	3.5	1	21	301	321	301	323	0.95
5	11	0.00027	0.052	16.4	1.9	1	23	329	351	329	351	0.99
6	11	0.0002	0.039	16.8	0.5	1	23	357	379	357	379	0.98
7	11	0.00068	0.13	15.1	1.4	1	23	387	410	387	410	0.97
8	11	0.00019	0.037	16.9	2.5	2	23	417	438	416	438	0.96
9	11	0.00036	0.071	16.0	0.3	1	23	444	466	444	466	0.98
10	11	2.7e-06	0.00052	22.7	1.8	1	23	472	495	472	495	0.96
11	11	7.4e-07	0.00014	24.4	1.8	1	23	509	531	509	531	0.96

Sequence Information

Coding Sequence: ATGGCAACTCAGTTTGTAGAAAGCGCTGTTAAGTTGGAGGAAGGAACTGAGAACGTTACGGAAATCCAGTCCTATTTGGCAGGGTTTCAGAAAGAAATCGGAGACAGCAATGTACAGTCAAATACACCCGCGCCCGACGACCACGACGGGGCCGACGCGGAAACGGAAGAGGGTACCTACTTCGTGGACCAGGCGGGGCACTACTACTTCCAAGCCAAGGGCGAAACACAGCCCGTGATGACGGTCATGTCCACGCTTCCGCAGCAGGGGACGTCTGAGGACGGCGAGGAGTTCATAATCAACCACGACGCGGAGGAGACGGAGCCTACGGAGGAGTCTGAAGAGCCTTCTCCGGTCGTTCAGAACAACTCTACCAATCAGATCCTGATAAATTCAGGAAACGCCTACCAAAGGGTGACGGTGGTTCCTGCAGACACCAGCTCGGGTGAGCTCAGTTACGTGTTGATTGTGCAGGATCCGGATATGAAGGATGGGGATCAAAACGAGGATGACGACCAGGATATGGCGGTGTACGATTTCGATGATCAGGATGGTAGCGTGCAGCTAGACTCGGACGCCGAGGACGACAAGTCCAAAATAGTCAAAGTAGTGCCGAAGAAGTCGACTCAGATAGTGGCCCAGGCTCACATGTGCAACTATTGCAACTACACCAGCTCGAAAAGGTACCTCTTGTCACGACATATGAAGTCCCATTCGGAAGAAAGGCCGCATAAATGCAGCGTGTGTGAACGGGGCTTTAAAACCATAGCATCGCTGCAGAATCACGTAAATACGCACACCGGGACCAAGCCGCACGCTTGCAAGTATTGTGAAGCCGCCTTTACGACTTcggGCGAGTTAGTACGTCACGTCAGGTACCGTCACACGCACGAGAAGCCGCACAAGTGCACGGAATGCGACTACGCCAGCGTGGAACTGTCAAAATTGAAACGTCACATCCGCTGTCACACGGGCGAGCGGCCGTACCAGTGTCCGCACTGCACGTACGCCAGTCCGGACACGTTCAAGCTGAAGAGACATCTGAGGATTCACACGGGGGAGAAACCCTACGAGTGCGAGGTGTGCCTGGCCCGGTTTACGCAGAGCAACAGTTTGAAAGCCCACAAGCTAACACATAATAttggcGACAAGCCGGTTTTTCAGTGCGAGCTCTGCCCGACCACCTGCGGGAGAAAAACCGACTTGAGAATCCACGTGCAGAAATTGCACACCTCCGACAAGCCTCTAAAGTGCAAAAGGTGCGGGAAAACCTTCCCCGATAGATATAGTTACAAACTCCATAACAAATCTCACGAGGGCGAGAAGTGCTTCAAGTGCGACTTGTGCCCTTACGCTTCGATTTCCGCGAGACATCTCGAATCGCACATGCTGATTCACACGGATCAGAAGCCCTACGAGTGCGACATGTGCGACCAGTCGTTTAGGCAGAAGCAGCTGTTGAAGAGGCACCAGAACTTATACCACAACCCGAACTACGTCCCCCCTCAGCCGAAAGAGAAATCGCACGAGTGCCCCGAGTGTTCCAGGACGTTCAGGCACAAAGGCAATTTGATAAGGCACATGGCCGCCCACGATCCGGACCCCTCCATCCAGCGGAAGCAGCTGGAACTCAAACTGGGAAGACAGAAGAAAATCCAGATGATCGACGGACAACAGGTGGAGGTCTTGGGTCCGGGTCTAGGCTCCGAAGAGGAAGAGGAAATCGACATGATGGCCGTCGAAGGCTCGGACGGACAGCAGTACGTCGTCCTGGAAGTGATACAGCTCGCGGACGGCGAGGAACAGGCCATGGTGGTGGGGAACGAGAACGGGGACGAGGGGACCATCTTGGGGATGGACGGCGTCATGCAGAACGGAGAACTCGACGAGGATGTTATTAAGGCTCTGCAGTCGGCCAGAAAAATCCACAAGCAGGAGGAAGAGGACGAGAAGAAGCCCATCATCCTCAGCCCCGACACGGATATGCAGAACTGCTTCGGATTTGATgaagaagaagaagacgagTCGAGAGACACCCTAACCCTACTTTCGAGCATAGACTGA
Protein Sequence: MATQFVESAVKLEEGTENVTEIQSYLAGFQKEIGDSNVQSNTPAPDDHDGADAETEEGTYFVDQAGHYYFQAKGETQPVMTVMSTLPQQGTSEDGEEFIINHDAEETEPTEESEEPSPVVQNNSTNQILINSGNAYQRVTVVPADTSSGELSYVLIVQDPDMKDGDQNEDDDQDMAVYDFDDQDGSVQLDSDAEDDKSKIVKVVPKKSTQIVAQAHMCNYCNYTSSKRYLLSRHMKSHSEERPHKCSVCERGFKTIASLQNHVNTHTGTKPHACKYCEAAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECEVCLARFTQSNSLKAHKLTHNIGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHNKSHEGEKCFKCDLCPYASISARHLESHMLIHTDQKPYECDMCDQSFRQKQLLKRHQNLYHNPNYVPPQPKEKSHECPECSRTFRHKGNLIRHMAAHDPDPSIQRKQLELKLGRQKKIQMIDGQQVEVLGPGLGSEEEEEIDMMAVEGSDGQQYVVLEVIQLADGEEQAMVVGNENGDEGTILGMDGVMQNGELDEDVIKALQSARKIHKQEEEDEKKPIILSPDTDMQNCFGFDEEEEDESRDTLTLLSSID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01352005;
90% Identity: iTF_01241114;
80% Identity: -