Pspi016617.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- stc
- Assembly
- GCA_963082785.1
- Location
- OY720306.1:10409585-10421926[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 4.5e+04 -4.1 1.6 15 19 348 352 347 352 0.81 2 14 0.078 1.8e+03 0.4 0.5 4 10 381 387 380 391 0.96 3 14 2.9e-06 0.066 14.6 15.1 3 19 395 411 387 411 0.85 4 14 0.25 5.6e+03 -1.2 1.3 5 10 436 441 436 441 0.96 5 14 3.4e-08 0.00078 20.7 9.1 1 19 447 465 447 465 0.97 6 14 5.1e-09 0.00012 23.3 13.0 1 18 505 522 505 523 0.98 7 14 8e-06 0.18 13.1 14.6 4 19 570 585 563 585 0.87 8 14 1.1 2.5e+04 -3.3 2.2 5 10 614 619 614 619 0.93 9 14 0.4 9.1e+03 -1.9 8.9 1 11 625 635 625 646 0.92 10 14 1.9e-10 4.3e-06 27.9 13.6 1 19 652 670 652 670 0.98 11 14 2 4.6e+04 -4.2 1.3 6 10 699 703 698 703 0.76 12 14 0.00076 17 6.8 9.9 10 19 717 726 714 726 0.93 13 14 5.6e-09 0.00013 23.2 15.1 1 19 762 781 762 781 0.97 14 14 0.0045 1e+02 4.3 15.3 3 19 792 810 791 810 0.92
Sequence Information
- Coding Sequence
- ATGCCCCCTTTTCCAGGTCCCGAAAGTGAGCTTATGTCCCATTGGGACGACAACGGCGGTGCCCCCTCGAGGGGATGGTACCCCAACAACGGCTTTAATTCGACGCACGGCCACAGCCAGGGGAATGTTTACACACTGGAACAAATCGAGGGGCAATATCAAAATAGGAATAATAACTACGGTTCATATCAGGATGATGATAGCGGTGGTGGGAGCAGGAGGAATCAAATCTTCGATGTGAGCACGTCCAATTTACAGCCGACTGCTGCAGAGTTTCGGCCGGGAACCTCGTACTCAGGGAATACATCCAGTAATGGGGCTGTGagaaaacattataataattctgataaGAAGAGAGGGAAATCACGGACACAAGAtgGTCCATCAAGATTCAACAACAAATCAAACGGTGAACGTACTATCGACAGTAGAAAAGAACAAAATCAAGCAATTAAAGATACCATGGATATCttgaacaaaatgaaaatgagCAATGTAGAACGTGAGTCTTCCACTGATAGCCACAACACTACTACTAATAACAATAGATCCAGCACAAACGTGAGCAACGCCCGAGAACGTACTGATAAGAAGAATCAAAGGGTTGCTAGGAACGACGGGGGAGGTGAAAAACAGAAACAATCGGGGTATAGGGGTAACAATGGGTATTACAATAACCAGAGGGATGATTATTATGGAAGAAAATGGGGTGGGGATAAAAGATCGGATAATTGGAGACAGAATCGTAGGGAACGGGAAAAGGATAGGAATGACAGGGTTGATAGTGATGAAAAATCAAGCAGTGATAAGAGTGACAGATATAAAAATCGACCGCAGcagattaaacaaaaatTGGATGCAGGATCGCAACGTGAACGACTTGAACAGATGATCACCCTCCGCATGCTGGAATGTCTAGTCTGCTGCGAACGTCTCCGCCACACAGACAAAGTCTGGTCGTGCAAGCAATGCTTCCACATCCTTCACCTTTCCTGCATAGTAAAATGGGCCGTTTCCTCCAAGTTAGAAGAAGGCTGGCGTTGCCCGGCCTGCCAAAACGTCTACCACGAAGTCCCCGACAGGTACAGATGCTACTGCGACAAATACACTGATCCGAAACTAGAACCCGGCAGCATTCCGCACAGCTGCGGGGAGGTGTGCGGAAGAAAAGGCCGCTCCTGCGAACACACTTGCACCCTCCTCTGCCACCCGGGCCCGTGCCCCGACTGCACTATTATGGTGGCGCGATCGTGCGGATGCGGTTCCACCAAACCCATGGTTAAATGCAATTCAGACATTCAAATCACCTGTCAGAATGTTTGCGATAAGGTTCTGAATTGTGGAGTGCACAAGTGTGTGGAGTTGTGTCATGTTGGAGAGTGTGCTGATTGTAAAGTTATGGTTGCGCAGGTTTGTTGCTGCGGGAAAGAGAATAGGGAGGTGGCGTGCACAAAGGACACTCAGGATGTTTCTTGTTATGAGTGTGGTGGATCCTGCGGGAAGATGTTGAGCTGTGGGAATCATTCATGTGATAAGCTGTGCCACCCTGGTGACTGTGGTAAATGCGTATCTGATCCAACTATCATTAAATCCTGTCCTTGTGGGCAAAGTGAGTTGACAGAGACGAGAACTTCGTGCCTTGATCCAATTCCCTGCTGTGATaagGTATGCAATAAAAGGTTAAAATGTGGCCAACCCAGTAACCCTCATCTCTGCAAAGAAAAATGCCATTTAGGCGAATGTCCACCGTGCCCTTTAACTACATTTGTGAAATGCCGCTGCGGCCATATGGACAAAGAACTAGATTGTAAAGATTTAACCAGCAAAGCTGACGATGCCCGGTgtcaaaaaaaatgcacaaagaaacgtCTATGCACAAAACACAAATGCAACCAATACTGCTGCATAGAAATAGAACACGAGTGCCCTTTGAACTGTAAAAACTTGTTATCATGTGGTCAGCACAGATGTGAACAAGCTTGTCATAGAGGAAGGTGTCCGCCTTGTTGGAGAAGCAGTTTTcagGAATTGTATTGTGAATGTGGATCGAGTGTTTTATATCCGCCAGTTCCATGTGGAACACGCCCACCACCTTGCAACAAACCTTGCTCAAGACCGCGCTCATGCAACCACCCGCCACACCATAACTGCCACACGGGTCAATGTCCTCCCTGCACGATATTTACCACTAGAATGTGTCATGGCAAGCACGAATCCAGGCAGACGATCCCTTGTTACCAGGATGACTTTAGCTGCGGCCTGACGTGTAACAAAGAAATGTCCTGCGGCCGACACAAATGTATTCAGACATGTCATCCGGGCGAATGTCCCGATCCGTGTACGCAGCCTTGCAACATTACAAGACAAAACTGTGAACATGCTTGCAACCAGCCTTGTCACAAACCTCCGTGCCAAAATACACCTTGCAGAGCAGTGGTTACTGTTACTTGCCAGTGTGGACTGAGGACCAGCACGAGGATTTGTGAGGATTTAGTGAGTGAATACCAAAAGATTGCTCTTTTTGATTTGGCGTCGAAGATGGCGGAAATACAAAAAGGACAAACGGtggatatttcaaatattattaacaaacagAAAAGGGGAACACCAAAAACGTTGGACTGTAATGATGAATGTCGCTTGGTGGAACGTAACAGACGCTTGGCAATAGGTTTGCAAATCAGGAATCCCGATTTGGGTTCAAAGTTGACGCCGAGGTATTCCGACTACATGCGTAGTTGGGCTAAAAAAGATCCGCGTTTCTGTCAGACTGTCCATGACAAACTCACGGAATTGGTAAAACTTGCCAAGGAGAGCAAGCAGAAGAGTCGGTCTCACTCCTTTGAATGCATGAACAAAGAAAAGCGACATTTTGTGCATGAATATGCCGAGCACTTTGGTTGTGAAACAATGGCTTATGACAGGGAACCCAATAGAAATATTGTCGCTACTGCTACTAGGGATAAATCTTGGTTACCGAGTGTCAGCCTCATAGAATTCCTGCAACGAGAAAACGGCCAAAGAAAAGTGCCTGGGCCGGTTCTAAATAAGGCCGAATCGAGCAGACGGTTGGACAGCCGACCTGGGGAATCAGTCTCCCTAAAGCTGCAAAGCCGCACACTGCCACAATGA
- Protein Sequence
- MPPFPGPESELMSHWDDNGGAPSRGWYPNNGFNSTHGHSQGNVYTLEQIEGQYQNRNNNYGSYQDDDSGGGSRRNQIFDVSTSNLQPTAAEFRPGTSYSGNTSSNGAVRKHYNNSDKKRGKSRTQDGPSRFNNKSNGERTIDSRKEQNQAIKDTMDILNKMKMSNVERESSTDSHNTTTNNNRSSTNVSNARERTDKKNQRVARNDGGGEKQKQSGYRGNNGYYNNQRDDYYGRKWGGDKRSDNWRQNRREREKDRNDRVDSDEKSSSDKSDRYKNRPQQIKQKLDAGSQRERLEQMITLRMLECLVCCERLRHTDKVWSCKQCFHILHLSCIVKWAVSSKLEEGWRCPACQNVYHEVPDRYRCYCDKYTDPKLEPGSIPHSCGEVCGRKGRSCEHTCTLLCHPGPCPDCTIMVARSCGCGSTKPMVKCNSDIQITCQNVCDKVLNCGVHKCVELCHVGECADCKVMVAQVCCCGKENREVACTKDTQDVSCYECGGSCGKMLSCGNHSCDKLCHPGDCGKCVSDPTIIKSCPCGQSELTETRTSCLDPIPCCDKVCNKRLKCGQPSNPHLCKEKCHLGECPPCPLTTFVKCRCGHMDKELDCKDLTSKADDARCQKKCTKKRLCTKHKCNQYCCIEIEHECPLNCKNLLSCGQHRCEQACHRGRCPPCWRSSFQELYCECGSSVLYPPVPCGTRPPPCNKPCSRPRSCNHPPHHNCHTGQCPPCTIFTTRMCHGKHESRQTIPCYQDDFSCGLTCNKEMSCGRHKCIQTCHPGECPDPCTQPCNITRQNCEHACNQPCHKPPCQNTPCRAVVTVTCQCGLRTSTRICEDLVSEYQKIALFDLASKMAEIQKGQTVDISNIINKQKRGTPKTLDCNDECRLVERNRRLAIGLQIRNPDLGSKLTPRYSDYMRSWAKKDPRFCQTVHDKLTELVKLAKESKQKSRSHSFECMNKEKRHFVHEYAEHFGCETMAYDREPNRNIVATATRDKSWLPSVSLIEFLQRENGQRKVPGPVLNKAESSRRLDSRPGESVSLKLQSRTLPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01185858;
- 90% Identity
- -
- 80% Identity
- -