Pcog033765.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- stc
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000176.1:516026-522262[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 9.1e+04 -4.1 1.6 15 19 336 340 335 340 0.81 2 15 0.16 7.3e+03 -0.6 0.7 4 10 369 375 368 377 0.94 3 15 3.4e-06 0.16 14.3 15.3 3 19 383 399 375 399 0.85 4 15 0.19 9.1e+03 -0.9 1.3 5 10 424 429 424 429 0.96 5 15 7.2e-09 0.00034 22.9 8.8 1 19 435 453 435 453 0.97 6 15 6.4e-08 0.003 19.8 12.0 1 18 493 510 493 511 0.98 7 15 1.6e-05 0.77 12.2 13.9 4 19 558 573 551 573 0.87 8 15 1.1 5.1e+04 -3.3 2.2 5 10 602 607 602 607 0.93 9 15 0.39 1.8e+04 -1.8 8.9 1 11 613 623 613 634 0.92 10 15 1.5e-10 7.2e-06 28.2 12.7 1 19 640 658 640 658 0.98 11 15 1.7 7.9e+04 -3.9 1.3 6 10 687 691 686 692 0.65 12 15 0.00075 35 6.8 9.9 10 19 705 714 702 714 0.93 13 15 1.3 6e+04 -3.5 0.2 8 11 719 722 718 722 0.84 14 15 3.6e-09 0.00017 23.8 15.4 1 19 750 769 750 769 0.97 15 15 0.0095 4.5e+02 3.3 14.3 3 18 780 797 779 798 0.90
Sequence Information
- Coding Sequence
- ATGTCCCACTGGGACGCCAACGGCGGTGCCCCCTCGAGGGGGTGGTACACCGACACCTTCGTCAATTCCGTGTACGGCCAAAACCAGGGCAACGTTTACACTCTGGAGCAAATCGAGGGGCAGTATCAAAATAGGAATAATAACCACAGTTCATCTCAGGGGGAAGATAGCGGTGGTGGTAACAGGAGGAATCAAAATTATTTTGATGTCAGCACGTCCAATTTACAGCCGACGGCTGTTGAATTCCGGCCTGGGACTTCTTACTCAGGGAGTTCATCTAGTAATGGGGCCGTAAGGAAGAATTATAATAATTCCGATAGGAAAAGGGGAAAACCACGAGCACAAGATGGTCAATCAAGGTTTAATAAACCAAATGGTGAACGTAATATTGATAGTAGGAAAGAACAGAATCAGGCTATTAAAGATACCATGGATATCTTGAACAAAATGAAAATGAGCAGTGTCGAGCGTGAGTCTTCCACTGATAGCCGCAGTGCTAATAATAATAAGTCCAGTGCGAATAGTAGCACTTCGCACGAACGTACTGATAAAAAAAATCCGAAATCTAATAGAAACGAGGGGAGCGATAAACATAAACAATCTGGGTACAGGGGTAACAACGGGTATTACAATAACCAACGGGATGATTATTACGGAAGGAAATGGGGTAATGGTAATGATAGAAGATCGGATAACTGGAGGCATAATCGTAAGGAACGGGACAAGGAGAAGAATGAAAGGGTTGATAATGATGAAAAACCAAACCACGATAGAAGTGACAAGTACAAGATTCGACCACACCAACTTAAACAAAAATTGGATGCAGCATCACAACGTGAACGACTGGAACAGATGATAACCCTCCGCATGCTGGAATGTTTAGTTTGTTGTGAACGTTTGCGTCACACCGACAAAGTTTGGTCGTGCAAGCAATGCTTCCACATCCTCCATCTCTCGTGCACGGTAAAATGGGCGGTTTCCTCGAAACTGGAGGAAGGCTGGCGTTGTCCGGCCTGTCAAAACGTCTACCTCGAAGTCCCCGAAAGGTACAAATGCTACTGCGACAAATACACCGATCCAAAACTAGAACCCGGCAGCATACCGCACAGCTGTGGCGAAACGTGCGGCAGAAAGGGCCGTTCGTGCGAGCACACCTGCACCCTCCTCTGCCACCCGGGCCCGTGCCCCGATTGCACCACGATGGTGGCCAGATCGTGCGGCTGCGGTTCTACCAAGCCGATGGTCAAGTGCAATTCGGACATTCAGATCACTTGCCAGAGTGTTTGCGATAAGGTTCTGAATTGTGGGGTGCATAGATGCGCTGAGTTGTGTCATGTCGGGGAGTGTGCTGATTGTAAGGTTATGGTTGCCCAGGTTTGTTACTGTGGCAACGAAAAGAGGGAGGTGCCGTGCACAGAGGATACTCAGGGAATTTCCGCTTATGAATGTGGCGGCTGCTGCGGGAAGATGCTGAGCTGCGGGAATCATTCGTGTGATAAAGAGTGCCACCCCGGCGAGTGTGATATATGCGCTTCCGATCCGACTGTCATCAAGTCCTGTCCTTGCGGGCAGAGTCAGTTAGCGGAGGCGCGAATTTCGTGCCTTGATCCAATTCCATGCTGTGATAAGGTATGCAATAAGAAGTTAAAATGCGGCCAACCGAGCAATCCACATCTATGCAAAGAAAACTGTCATTTAGGCGATTGCCCTCCTTGTCCACTGACCACACTAGTGAAATGCCGCTGCGGTCACATGGACAAAGAACTGGATTGTAAAGACTTGACCAGCAAAGCCGATGACGCTCGGTGTCAGAAAAAATGCACAAAGAAACGTCTGTGCACAAAACATAAATGCAACCAATACTGCTGCATAGAAATTGAACACGAGTGCCCACTCAACTGTAAAAATTTATTATCCTGCGGTTTGCACAGATGCGAACAAACGTGTCATAGAGGGAGGTGTCCGCCTTGTTGGAGAAGCAGTTTTCAGGAATTATATTGTGAATGTGGATCAAGTGTTTTATATCCACCCGTACCTTGCGGAACCCGCCCGCCTCCGTGCAACAAGCCCTGCTCAAGACCACGCCCGTGCAACCACCCTCCCCACCACAACTGCCACACGGGCCAGTGTCCGCCCTGCACGATTTTCACCACCAGATTATGTCATGGAAAACATGAATCCCGGCAGACCATCCCTTGCTACCAGGACGACTTCAGCTGCGGCCTGACATGCAACAAGGAGATGCCTTGCGGTCGGCACAAGTGTGCTCAAACTTGCCACCCAGGCGACTGTCCTAATCCCTGCACGTTGCCTTGCAACGTCACGCGGCCCAATTGCGAGCATCCTTGCAACCAGCCGTGTCACGAACCGCCGTGTCCGTACGTTTCGTGCAGGGCGGTGGTGACTGTTACGTGCCAGTGTGGATTGAGGACTAGCTCAAGGGTGTGTGTGGAGTTAGCGGGGGAATATCAGAAGATTGCTGTCTGTGATTTGGCATCGAAGATTGCGGAAATTCAGAAAGGGCAGACTGTGGATATATCAGATATTATTAACAAGCAGAAGAGGGGAACACATAAAACGTTGGAATGTAACGATGATTGTCGCCTAGTCGAACGTAACAGACGATTGGCGATAGGTTTGCAAATCAGGAACCCCGACTTGGGTTCGAAATTAACTCCGAGGTACTCGGACTACATGCGTGGCTGGGCCAAAAAGGACCCGCGCTTCTGCCAAACTGTCCACGAAAAGCTATCGGAATTGGTGAAGCTGGCCAAGGAGAGCAAGCAGAAGAGCCGGTCGCACTCCTTCGACTGCATGAACAAGGAGAAGAGGCATTTCGTGCACGAGTATGCTGAGCACTTTGGCTGCGAAACGATGGCCTATGACAGGGAGCCCAATAGAAACATTGTTGCTACTGCTACTAGGGATAAATCATGGTTACCCAGTGTGAGCCTCATAGAATTCCTGCAACGAGAAAGCGGCCAAAGGAAAGTGCCTGGGCCGGTTCTGAACAAGGCCGAGTCGAGCAGGCGTTTGGACAGCCGGCCCGGCGAATCGGTCTCCCTGAAACTCCAGAGCCGCACACTGCCACAGTGA
- Protein Sequence
- MSHWDANGGAPSRGWYTDTFVNSVYGQNQGNVYTLEQIEGQYQNRNNNHSSSQGEDSGGGNRRNQNYFDVSTSNLQPTAVEFRPGTSYSGSSSSNGAVRKNYNNSDRKRGKPRAQDGQSRFNKPNGERNIDSRKEQNQAIKDTMDILNKMKMSSVERESSTDSRSANNNKSSANSSTSHERTDKKNPKSNRNEGSDKHKQSGYRGNNGYYNNQRDDYYGRKWGNGNDRRSDNWRHNRKERDKEKNERVDNDEKPNHDRSDKYKIRPHQLKQKLDAASQRERLEQMITLRMLECLVCCERLRHTDKVWSCKQCFHILHLSCTVKWAVSSKLEEGWRCPACQNVYLEVPERYKCYCDKYTDPKLEPGSIPHSCGETCGRKGRSCEHTCTLLCHPGPCPDCTTMVARSCGCGSTKPMVKCNSDIQITCQSVCDKVLNCGVHRCAELCHVGECADCKVMVAQVCYCGNEKREVPCTEDTQGISAYECGGCCGKMLSCGNHSCDKECHPGECDICASDPTVIKSCPCGQSQLAEARISCLDPIPCCDKVCNKKLKCGQPSNPHLCKENCHLGDCPPCPLTTLVKCRCGHMDKELDCKDLTSKADDARCQKKCTKKRLCTKHKCNQYCCIEIEHECPLNCKNLLSCGLHRCEQTCHRGRCPPCWRSSFQELYCECGSSVLYPPVPCGTRPPPCNKPCSRPRPCNHPPHHNCHTGQCPPCTIFTTRLCHGKHESRQTIPCYQDDFSCGLTCNKEMPCGRHKCAQTCHPGDCPNPCTLPCNVTRPNCEHPCNQPCHEPPCPYVSCRAVVTVTCQCGLRTSSRVCVELAGEYQKIAVCDLASKIAEIQKGQTVDISDIINKQKRGTHKTLECNDDCRLVERNRRLAIGLQIRNPDLGSKLTPRYSDYMRGWAKKDPRFCQTVHEKLSELVKLAKESKQKSRSHSFDCMNKEKRHFVHEYAEHFGCETMAYDREPNRNIVATATRDKSWLPSVSLIEFLQRESGQRKVPGPVLNKAESSRRLDSRPGESVSLKLQSRTLPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186701;
- 90% Identity
- -
- 80% Identity
- -