Basic Information

Insect: Philonthus spinipes
Gene Symbol: -
Assembly: GCA_963082785.1
Location: OY720313.1:7202535-7218746[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.4e-05 0.0038 18.9 1.8 1 23 195 217 195 217 0.98

2 12 0.0026 0.41 12.5 1.1 1 23 223 245 223 245 0.96

3 12 1.8e-05 0.0028 19.3 3.1 1 23 251 273 251 273 0.98

4 12 0.00015 0.023 16.4 1.4 3 23 287 307 285 307 0.95

5 12 0.00012 0.019 16.7 0.3 2 23 314 335 313 335 0.97

6 12 1.3e-05 0.002 19.7 6.2 1 23 341 363 341 363 0.97

7 12 9.6e-07 0.00015 23.3 0.1 1 23 369 391 369 391 0.98

8 12 1.8e-06 0.00029 22.4 0.0 1 23 397 419 397 419 0.99

9 12 2.7e-07 4.2e-05 25.0 1.5 1 23 425 447 425 447 0.99

10 12 3.4e-07 5.3e-05 24.7 4.2 1 23 453 475 453 475 0.98

11 12 1.8e-05 0.0028 19.3 0.3 1 23 481 503 481 503 0.98

12 12 4e-07 6.3e-05 24.5 1.4 3 23 511 531 509 531 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.4e-05	0.0038	18.9	1.8	1	23	195	217	195	217	0.98
2	12	0.0026	0.41	12.5	1.1	1	23	223	245	223	245	0.96
3	12	1.8e-05	0.0028	19.3	3.1	1	23	251	273	251	273	0.98
4	12	0.00015	0.023	16.4	1.4	3	23	287	307	285	307	0.95
5	12	0.00012	0.019	16.7	0.3	2	23	314	335	313	335	0.97
6	12	1.3e-05	0.002	19.7	6.2	1	23	341	363	341	363	0.97
7	12	9.6e-07	0.00015	23.3	0.1	1	23	369	391	369	391	0.98
8	12	1.8e-06	0.00029	22.4	0.0	1	23	397	419	397	419	0.99
9	12	2.7e-07	4.2e-05	25.0	1.5	1	23	425	447	425	447	0.99
10	12	3.4e-07	5.3e-05	24.7	4.2	1	23	453	475	453	475	0.98
11	12	1.8e-05	0.0028	19.3	0.3	1	23	481	503	481	503	0.98
12	12	4e-07	6.3e-05	24.5	1.4	3	23	511	531	509	531	0.97

Sequence Information

Coding Sequence: ATGGACATGAGCCCCTATCTGGCCGTGCCGCTGCAGCTGGACAGGATATGCAGGGCGTGCCTCACCGAGAAGGGCGACATGCGGCCCCTCTTCGGGGCCTGTCTCGACGAGATGCTCGTCTCGTTCGCCTCCATTAAGgTACAAGAAGGAGACGGTCTGCCCAATTTGATGTGTGTCCAGTGCGTGTTGCAATGCAGCAGGGCTTACACGTTTAAGCAGCAGTGTGAAAAATCGGAAACAGTTTTGAGGAACTACATAAAGCCCGAATTCCAGGAACAACTAGCGCAAAGCTTGGCACAGCCGGAAGAAAAGGAGGTAAGCCTGGAGCTAGACTTTCCAGAACCCATAGACATAGAGGACAACAAAGAGGACATTCCGAATTATTTCACAAACGTCGGGTATTCAGAGGATTGCGATATTGAGGTTAAGAATGAACTCATTTACAACATGGATAACGTGGTGAATGCGTCCCCTCTCCTAGTAAGAGACGAGTCTATGCCTGAAGATCCCCTTGAATCTGTCGAGTCTGAAACAATCGTCACAGAAAAACCCCCTCCAAAACCATCACAAAAGAAAGCAAAACACCAATGCACGAAATGCGACGAATCCTTCCAACTGAAAGTCGACCTCAAGGTCCACATGATGAGCCACCCCAAGGAAAACAGCCATTTTTGCAACGTGTGCAATAAGGGCTTTGCCGAGGCGAGGATTCTGAAGAGGCATCTGAAAATACATCTTACGAAAAAGCCGCACCAGTGCGATCAGTGTGATATGTCGTTTGCAGAGAGCTCAAATTTGAGTAAGCACAAGAAGAAGCACACGGGGGAGTTGAGGAATATTAAGGGGAAGCCGCATTTGTGTTCAGTGTGCGGGAGGGCTTTCAAATGGGCATCGAGCTTGTCCAAGCACATGAAGTACCACACCGGGCATAAGCTACTTAGTTGCGAGTATTGCAATCGGCAATACGTAGAAGCGAGGAGTTTAAGGATACACATAAGATCCCACACCGGAGAGCGTCCGCACGTGTGTCAAATCTGTCACAAGAGCTTCACGCAGATATGCAATCTTGAGAAACACCTGCGTGTACACACAGGAGAAAAACCCTTCATTTGTCCAATCTGCGGAAAAGGCTTCACACAATCTGGTTACGTTGGTATCCATATGCGCACGCACACCGGTGAGCGTCCCTACGTGTGTCCCACGTGCGGAAAAGCGTTTGCCGGATCAAATACTCTAGCCATTCACCAACGTATACACACAGGAGAAAAACCCTACACGTGCAATATATGTGGAAAGGCATTCACCAGGCACGAGACTCTGGTGATACACACTCGTTCACACACCGGTGACAGGCCCCACGTGTGTACCCTTTGCAACAAGGCATTCACCTCTAGCAGCCATCTGACTGGACATATGAGGACGCACACCGGAGAGAAACCTTACGAATGTTCTGTTTGCTTGAAAAGATTTGCCGGTACAAGCAGTTTGAAAGTGCATATGCGAGCGCATTCCGGTGAGAAGCCATTCGGTTGCAAAGTGTGTGGAAAGTTTTTTACGCAGTCAAGCTCTCTGCAACAGCACATGACATCCCACCCGCTACTCGAAATACAGACGACCAAGACAGCCAAGGTCGAGACCGTTCAAATAGCTGATTTACTGTGA
Protein Sequence: MDMSPYLAVPLQLDRICRACLTEKGDMRPLFGACLDEMLVSFASIKVQEGDGLPNLMCVQCVLQCSRAYTFKQQCEKSETVLRNYIKPEFQEQLAQSLAQPEEKEVSLELDFPEPIDIEDNKEDIPNYFTNVGYSEDCDIEVKNELIYNMDNVVNASPLLVRDESMPEDPLESVESETIVTEKPPPKPSQKKAKHQCTKCDESFQLKVDLKVHMMSHPKENSHFCNVCNKGFAEARILKRHLKIHLTKKPHQCDQCDMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLSCEYCNRQYVEARSLRIHIRSHTGERPHVCQICHKSFTQICNLEKHLRVHTGEKPFICPICGKGFTQSGYVGIHMRTHTGERPYVCPTCGKAFAGSNTLAIHQRIHTGEKPYTCNICGKAFTRHETLVIHTRSHTGDRPHVCTLCNKAFTSSSHLTGHMRTHTGEKPYECSVCLKRFAGTSSLKVHMRAHSGEKPFGCKVCGKFFTQSSSLQQHMTSHPLLEIQTTKTAKVETVQIADLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01185415;
90% Identity: -
80% Identity: -