Basic Information

Insect: Philonthus cognatus
Gene Symbol: -
Assembly: GCA_932526485.1
Location: CAKOBG010000308.1:171941-175645[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0022 0.46 13.3 1.2 1 23 157 179 157 179 0.98

2 12 0.0038 0.78 12.6 1.1 1 23 185 207 185 207 0.96

3 12 8.8e-05 0.018 17.7 3.0 1 23 213 235 213 235 0.98

4 12 0.00021 0.044 16.5 1.4 3 23 249 269 247 269 0.95

5 12 0.00018 0.036 16.8 0.3 2 23 276 297 275 297 0.97

6 12 4.2e-06 0.00088 21.9 4.0 1 23 303 325 303 325 0.97

7 12 1.4e-06 0.00029 23.4 0.1 1 23 331 353 331 353 0.98

8 12 2.6e-06 0.00054 22.5 0.0 1 23 359 381 359 381 0.99

9 12 5.6e-07 0.00012 24.6 1.5 1 23 387 409 387 409 0.99

10 12 4.7e-07 9.8e-05 24.9 4.5 1 23 415 437 415 437 0.98

11 12 2.5e-05 0.0052 19.4 0.3 1 23 443 465 443 465 0.98

12 12 8.7e-07 0.00018 24.0 0.5 3 23 473 493 471 493 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0022	0.46	13.3	1.2	1	23	157	179	157	179	0.98
2	12	0.0038	0.78	12.6	1.1	1	23	185	207	185	207	0.96
3	12	8.8e-05	0.018	17.7	3.0	1	23	213	235	213	235	0.98
4	12	0.00021	0.044	16.5	1.4	3	23	249	269	247	269	0.95
5	12	0.00018	0.036	16.8	0.3	2	23	276	297	275	297	0.97
6	12	4.2e-06	0.00088	21.9	4.0	1	23	303	325	303	325	0.97
7	12	1.4e-06	0.00029	23.4	0.1	1	23	331	353	331	353	0.98
8	12	2.6e-06	0.00054	22.5	0.0	1	23	359	381	359	381	0.99
9	12	5.6e-07	0.00012	24.6	1.5	1	23	387	409	387	409	0.99
10	12	4.7e-07	9.8e-05	24.9	4.5	1	23	415	437	415	437	0.98
11	12	2.5e-05	0.0052	19.4	0.3	1	23	443	465	443	465	0.98
12	12	8.7e-07	0.00018	24.0	0.5	3	23	473	493	471	493	0.98

Sequence Information

Coding Sequence: ATGGCGCCTAATGGGTTAATCGGTGTTATCATTGTGTTAAAAGTTCAAGAAGGTGATGGTCTTCCAAACCTAATGTGTGTCCAATGTGTGCTGCAATGCAGCAGAGCGTACACTTTCAAGCAGCAATGCGAAAAATCGGAAACCGTACTCAGAAATTACATAACTCCGGAATTTCAGGAACAACTCGCACAAAGTTTGAACGAACAAGATGATAAATCAGTGAGTTTGGAGTTGGATTTTCCAGAAACCATAGATATTGTAAACAAAGAGGACCTTCCTAATTATTTTACAAACGTCGGATATACTGAAGATTGTGAATTAGAGGTAAAAAATGAACTTATTTACAACATGGAAAATGTCGTGGATACATCGCCCCTTTTACAAAGAGATGACACGATAGTCAATGAAACCCTCGCAGCGGAAACAATCGAAATCGAAAAACCGGCTCCTGCTCAATCAAAATCCAAACATCAGtgcctgaagtgcgacgaatcgtttctcttaaaagtcgacctcaaagttcatatgatgagccaccctaaagagaacaaccacttctgcaacgtgtgcaacaagggcttcgctgaggcgaggatcctgaagcggcacctgaagatacacctgacgaaaaagccacaccagtgcgaccagtgcgagatgtcctttgccgagagctcaaatctcagtaagcacaagaagaagcacacgggggagcTAAGGAACATCAAGGGAAAGCCGCATTTGTGCTCGGTGTGCGGCAGGGCATTTAAATGGGCGTCGAGTTTGTCGAAACATATGAAGTATCACACTGGGCATAAGTTGCTTAGTTGTGAATATTGTAATCGACAATATGTAGAGGCTAGAAGTTTAAGAATCcacattagatctcacacaggtgaacgtccacacgtttgccaaatttgcaataaaagcttcacgcaaatatgcaatttagaaaaacatttacgggtgcacacgggagaaaagccattcatatgccctatttgcggaaaaggGTTTACACAGTCAGGTTATGTCGGTATacacatgcgcacacacacaggtgagcgtccgtacgtgtgtccaacgtgcggaaaagcatttgcgggttcgaataccctagcaattcaccagcgtatacacacaggggaaaaaccgtacacttgtagtatatgcgggaaggcttttacgagacacgagactttggtgatacacacacgttcccacacaggcgacagacctcacgtgtgcaagctctgcaataaagcgtttacttcgagtagtcatttaaccggtcatatgagaacacacaccggggaaaaaccttatgaatgtagtgtttgtctgaaaagAtttgctggtacgagtagtttaaaagtacacatgcgggcccattccggagaaaaaccctttggatgtaaagtgtgcggaaagaatttcgcacaggcgagtacgctgcaacaacacatgacaactcaCCCATTGTTGGAAATACAAACGAATAAAACAGCAAAAGTTGAAACGGTTCAAATAGCCGATTTGTTGTGA
Protein Sequence: MAPNGLIGVIIVLKVQEGDGLPNLMCVQCVLQCSRAYTFKQQCEKSETVLRNYITPEFQEQLAQSLNEQDDKSVSLELDFPETIDIVNKEDLPNYFTNVGYTEDCELEVKNELIYNMENVVDTSPLLQRDDTIVNETLAAETIEIEKPAPAQSKSKHQCLKCDESFLLKVDLKVHMMSHPKENNHFCNVCNKGFAEARILKRHLKIHLTKKPHQCDQCEMSFAESSNLSKHKKKHTGELRNIKGKPHLCSVCGRAFKWASSLSKHMKYHTGHKLLSCEYCNRQYVEARSLRIHIRSHTGERPHVCQICNKSFTQICNLEKHLRVHTGEKPFICPICGKGFTQSGYVGIHMRTHTGERPYVCPTCGKAFAGSNTLAIHQRIHTGEKPYTCSICGKAFTRHETLVIHTRSHTGDRPHVCKLCNKAFTSSSHLTGHMRTHTGEKPYECSVCLKRFAGTSSLKVHMRAHSGEKPFGCKVCGKNFAQASTLQQHMTTHPLLEIQTNKTAKVETVQIADLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01186425;
90% Identity: -
80% Identity: -