Pspi039043.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonthus spinipes
Gene Symbol
tfip11
Assembly
GCA_963082785.1
Location
OY720320.1:5839742-5849070[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-92 2.5e-88 297.6 11.0 1 275 396 669 396 669 0.98
2 2 0.41 9.5e+03 -2.8 0.1 244 270 683 709 674 714 0.66

Sequence Information

Coding Sequence
ATGTCTGAGGATGAAATGGAAAAATTCGAAATCACCGATTATGACATCGAGAACGAATTTAACATATATAGAAAACGGCGGGGCAATaccaaacaacaacaaatttatGgtATTTGGGCTGATGATAGTGATAATGAAGCAGAAGAATCAAAAAACAAGCGTGGCGGTAATAAAAAGCAGCCGAAAAACTACACAGCGCCCATCGGTTTCGTCGCAGGCGGCGTTCAACAAGCcggcaagaaaaaaatcaaagaaccCGAGCCGGAAAACTCCAATTCCCCGAAACCGACCACTTCCTTTAAAACCAACTCGAGCGACGATTCCGAGGAGGAGCAATTCTCGAGGAAGGGTTTTGGCTCCGGAGGCCATCAAACCACCGAAGCGCACGTCACCGAAATAACGGCTGATATTGCCGGTATGAGGACCAACAAGGGTTACAAGTCAAATTTAGCGACGAAGGGAGTGGGAACTTGGGAGAAGCACACGAAGGGCATTGGCGCGAAGTTGCTGCTGCAGATGGGGTTTCAGCCGGGGAAAGGTTTGGGAAAGGATTTACAGGGTATTGCTGCTCCGGTTGAAGCGCATTTGAGGAAGGGAAGGGGAGCCATCGGGGCTTACGGCCCGGAAAAACCTGCTAGTGTTGCTAAAGTGGGGATATCAACAgacATAAAAAGTGAAGGTCAAGAGGAGCAGAAATCGAAATGGAAGAAAGAAGATGCGGGAAGGAAGAAAGCTCGATATTATTACAGAAGTGTTGATGATGTAATAGAAAAAGATAAAAAGCCGGGCATATTTAAGCACACAAGTTTTTCTAGtgAGTTAAGTAAAGTTAAAGTAATCGACATGACTGGCCCTCAACAAAGAATCCTGAGTGGATATCACGCCCTCAGCGGACTCAAAGCGCCGCCTGGGGTGGAGCACTACGAAGACGTTCTTCACAAAAAATGCTCAAATTTCACTCTACCGGAAATACAGCACAATTTGGACATTTTAGTCGAAATGTGCGAACAGGATATAATAAAAACTGATAGAAACACAAGGCACAATCAGAACAAAATTGTTGCGCTCGAGCAAgaggaaatgcaattgaaaaccCTGTTgaaaaaagaagagaaagagGTCATGAACATGAAGACAGTTCTAGATATCGTTGAGAGATTGATCGATCCCACTTTAGGCTTATCGTTAGGGCAGATGTCGCAGATATTTAAACAACTTCAaaCTGAACATTATGAAGATTACGTACAGTACGAGCTGGGCGAACTGGCTCCCGGTCTGGTCGGACCTCTGATCACTTCCGCTTTGGCGAGCTGGTCCCCGTTGACGCAACCCGAACTGTACACGGACGTTTTCGAACAATGGAAGGAACTTCTATCGGACGGCCGGCGTCAGCAACGTGGGACAATAGAAGGTAATAGTATGGGAATACTGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCCGTTATCAGAACTTGCGTTAGcTCGTGGCCGGCTCGAGATTCCGATTCGATGATCAACGTTCTGGAAAAGTGGAAACCTCTGTTGCCGGTTTGGATTCTGAACAACATTCTAGAGCTGCTGATCATCCCACGATTAGTATCGGAAGTCACCAATTGGGACCCATTGACAGATACCATTCCGATTCACACATGGATACATCCATGGATACCGCTCTTAGaTGAAAAGTTAAAAGCCCACGTGTACCcgataattcaagaaaaattgGGAGCTGCCCTGGCGAACTGGCATCCATCGGACAGATCTGCTAAGTTAATGTTGAAACCGTGGCAGCGAGTTCTACCGGAGGGCGCTTTCTTCGGATTCTTGGTGAAGTACATCGTGCCGAAACTGCAGCTGTGCATGCAGAGCTTGCCGATAAACCCTCACCAACAGCCCCTAGacgCTTGGAATTGGGTGATGTACTGGAGTGATATGCTCAGTATTGGAAACTTGACCCTGATTCTGGACAAGTTCTTCTTTCCCAGATGGCTGCAGACTCTGGCTGTTTGGTTGAATCACAATCCTGATTATTCACAAGTGACGGAATGGTATTCTGGATGGAAACGGATGATTTCGGAGGATTTATTTAAGCAACCCACAATTAAAGataactTTCACAAGGCTTTAGAAATGATGAACCGAGCAGTTAGCGGAGGGCAACAGCCTGGGGCGAAGGAATCCGTGTCTTATCTCACCAACATAGAGACAGTGCATCCGCCTCCTCCACCTCCTCCTCCCAGGATAGAAtcaATTTCTGATGCAGTACGAACGGCTGTCAACATCCCGCAGGGCTTCAAAGACTTGATCGCCAAGCGTTGTGAGGAAAGAGGGATCTTATTTGTGCCTATCACCAATAAATATCACGAAGCGAAGCAAGTGTACAGGTTGGGTTCAAGTGGAATGCAGTGCTACATCGACAGGAACGTCGTGTTTTGCAGTAAAAACGGCTCGACGTGGTTGCCCACATCCCTTACTAAACTGTTGGACACTGCTTAG
Protein Sequence
MSEDEMEKFEITDYDIENEFNIYRKRRGNTKQQQIYGIWADDSDNEAEESKNKRGGNKKQPKNYTAPIGFVAGGVQQAGKKKIKEPEPENSNSPKPTTSFKTNSSDDSEEEQFSRKGFGSGGHQTTEAHVTEITADIAGMRTNKGYKSNLATKGVGTWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIAAPVEAHLRKGRGAIGAYGPEKPASVAKVGISTDIKSEGQEEQKSKWKKEDAGRKKARYYYRSVDDVIEKDKKPGIFKHTSFSSELSKVKVIDMTGPQQRILSGYHALSGLKAPPGVEHYEDVLHKKCSNFTLPEIQHNLDILVEMCEQDIIKTDRNTRHNQNKIVALEQEEMQLKTLLKKEEKEVMNMKTVLDIVERLIDPTLGLSLGQMSQIFKQLQTEHYEDYVQYELGELAPGLVGPLITSALASWSPLTQPELYTDVFEQWKELLSDGRRQQRGTIEGNSMGILPYDSLLWHTWVPVIRTCVSSWPARDSDSMINVLEKWKPLLPVWILNNILELLIIPRLVSEVTNWDPLTDTIPIHTWIHPWIPLLDEKLKAHVYPIIQEKLGAALANWHPSDRSAKLMLKPWQRVLPEGAFFGFLVKYIVPKLQLCMQSLPINPHQQPLDAWNWVMYWSDMLSIGNLTLILDKFFFPRWLQTLAVWLNHNPDYSQVTEWYSGWKRMISEDLFKQPTIKDNFHKALEMMNRAVSGGQQPGAKESVSYLTNIETVHPPPPPPPPRIESISDAVRTAVNIPQGFKDLIAKRCEERGILFVPITNKYHEAKQVYRLGSSGMQCYIDRNVVFCSKNGSTWLPTSLTKLLDTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01096635;
90% Identity
-
80% Identity
-