Pspi012663.1
Basic Information
- Insect
- Philonthus spinipes
- Gene Symbol
- -
- Assembly
- GCA_963082785.1
- Location
- OY720304.1:19373424-19402397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.5e-12 8.8e-09 36.2 0.0 1 39 381 420 381 424 0.90 2 4 8.1e-13 9.5e-10 39.3 0.1 1 39 435 473 435 476 0.95 3 4 1.6e-18 1.9e-15 57.6 0.0 1 45 490 535 490 535 0.98 4 4 2.4e-16 2.8e-13 50.6 0.0 1 40 542 582 542 586 0.92
Sequence Information
- Coding Sequence
- ATGCCGGAAAGGAAAGCAAAGGAAAACGCCTATCCGGAGATTTTTTCCGGCCCGGAGAGAGAGACAATTCCGGGTCTAATCCTGGGGGTTGCCTGCTCTGTTGCGCTCGGAACCGAGAGCTTGCCCACCCAAAGAACCTGTTTTTATTTTGGTTCGCAGTCGCTGTTGAAGACGGCtgatcaattgaaaataaagggGCTGTGCGAGTCGCCCGACGAAAACGAGAACCACAACGGCCTCGAGAACCAAGAGAACCAACAACGAGACGCTTCCGCTTCGCCTACCACGTTTCCATTCACCGCCAGGGAATTCAGCAAATTAGCCAAGTTGGAGTTTTCGCCGAAGCAACAGCAACACCACCAGGGAAACAACGCGAACACCAACAATACGTCGGGCACCACGGAAAGCGGCAACAGCAGCAGCACCAGCGGTAACAACAACAGGAAGCACAAGTACAGAAAGCCGGAGAAGATCGTGGTCAGCAATCAAGAGGAGGAGGATAAAGAAACGGAGAAAGAAGAACGCGAGCCAAATGGTGGTGAGCCGTCGGACGAGGAGAACAACGCCGCCAAACCAGTCTTGAGCACGAATTCGAATGAGGAGAGGAGGAGGAAGCAAGTGACGCCAGTACAAAACAAACCGATTAACATGAGCAGTAATGCGCTTTTGGCTGGACAGATGCTCTTCTCGCAGTTCGGCGTAGATAATGAAGACTTCCCGCCAGAACCGCCGGCGCCAACGGCGACACCTGTCGGACACGTGGACATGCAAGACCATTCGCCAACGCGGACCCTGCTCACCAACTCCTCCCTGCATAGGACAGACCTTTCAGacTCGCATATAAAATTTGGagacattaaaaaagaaatcgaCATAAAATTCGAAACGCTACGATCGTACGACCAGGATTCACTGCTGGACATGGAAGCCTCCCGGATGTCAGCACACGACCATTCCATGGACAGCCACGAGGATACCGACCAAAATATACACCACACGACGATGATGATCACGCCGGAATTGATGGGACTCATGCCTGGGGCTTCACATCGAATGGagCATCTGGATCACTTAGGAAAAACAAATGGGCATTCAGATCACACGTCCGGTTCCCGACATGGAGGAGGGCCGAAAACATGGACGCAAGATGACATGGAATTAGCTTTAGACGCTTTAAGGAACCACAACATGAGTTTAACGAAGgcATCAGCAACATATGGAATCCCATCGACGACGTTATGGCAACGGGCGCACCGTTTGGGCATCGACACCCCGAAAAAGGAGGGCCCCACGAAATCTTGGACGGAGGAGAACCTGAATTCGGCCCTGGAGGCCCTCAGGACGGGCACGATATCGGCGAACAAGGCCAGCAAGGCCTACGGAATACCGAGCAGCACCTTGTACAAAATCGCCCGGAGGGAGGGAATACGGCTGGCGGCGCCCTTTAACGCGGCGCCCACGACGTGGACACCTGAGGACTTAGAGAAGGCGCTGGAGTCGATACGGACGGGCCAGACGTCGGTGCAGAGGGCGTCCACGGAGTACGGCATCCCGACGGGGACGCTGTACGGGAGGTGTAAACGGGAGGGGATTGAATTGTCCAGGTCGAATCCGACGCCTTGGTCAGAAGATGCCATGGGTGAAGCTTTGGAAGCTGTTAGaTTAGGACATATGTCAATAAATCAAGCGGCGATACACTACAACCTGCCATACTCGTCACTGTACGGCCGCTTCAAGCGCGGCATAAAATACTCGGAATCCGACCCGATCGACCCCAACACCGACAGCCAGTCGCAAATGGAGGGCCAGCCACACATGATGGACTACAGCACGCACCAAATCCAGTACCAGCAGAACCAGAACAGCTGA
- Protein Sequence
- MPERKAKENAYPEIFSGPERETIPGLILGVACSVALGTESLPTQRTCFYFGSQSLLKTADQLKIKGLCESPDENENHNGLENQENQQRDASASPTTFPFTAREFSKLAKLEFSPKQQQHHQGNNANTNNTSGTTESGNSSSTSGNNNRKHKYRKPEKIVVSNQEEEDKETEKEEREPNGGEPSDEENNAAKPVLSTNSNEERRRKQVTPVQNKPINMSSNALLAGQMLFSQFGVDNEDFPPEPPAPTATPVGHVDMQDHSPTRTLLTNSSLHRTDLSDSHIKFGDIKKEIDIKFETLRSYDQDSLLDMEASRMSAHDHSMDSHEDTDQNIHHTTMMITPELMGLMPGASHRMEHLDHLGKTNGHSDHTSGSRHGGGPKTWTQDDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRTGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYSESDPIDPNTDSQSQMEGQPHMMDYSTHQIQYQQNQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096538;
- 90% Identity
- -
- 80% Identity
- -