Omur096567.1
Basic Information
- Insect
- Ontholestes murinus
- Gene Symbol
- -
- Assembly
- GCA_963969525.1
- Location
- OZ018398.1:34115968-34145275[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-12 1.9e-08 36.3 0.0 1 39 350 389 350 393 0.90 2 4 4.7e-13 2.1e-09 39.4 0.1 1 39 404 442 404 445 0.95 3 4 4.3e-19 1.9e-15 58.7 0.0 1 45 459 504 459 504 0.98 4 4 1.4e-16 6.2e-13 50.7 0.0 1 40 511 551 511 555 0.92
Sequence Information
- Coding Sequence
- ATGGTACGAAAACCGAGACATGCCTACTATTCGGCTTCCTTCCTAAACGGTCCACTACACTCCCGCTTACTATCCTTACATCCAACTGCCAAACCGTACATCTCGAGGTCGCTGTTAAAGACGGCggatcaattgaaaataaagggGCTGTGCGAGTCGCCCGATGAGAACGAGAACCAGGAGGACCCCTCTTCGTCGCCCTCGTCGCCGTTCCCATTCGCCGCCAGAGAGTTTCCGAAACTACCCAAACTAGAGTTCTCGCCGCGGCACCACCCGGCCACCGCGACCGCCGAGAGTAACAACAACAGGAAGCACAAGTACAGAAAGCCCGAGAAGATCGTGGCCAGCCAGGAGGAGGACAATAAAGAAACGGAGAAGGAAACGCAAGAGCCAAATGGTGGTGAGTCGTCGGACGAGGAGAACGCCGCCAAACCAGTCTTGAGTTCGAATGAGGAGAGGAGGAGGAAACAAGTGACGCCAGTACAAAACAAACCGATTAACATGAGCAGTAATGCGCTTTTGGCCGGACAGTTGAATCATACTAACACACTAACCATTAACATAACTTGTTTGCAACTCACGCAGATGCTCTTCTCGCAGTTCGGTGTAGACAATGAGGACTTCCCGCCAGAGCCACCGGCGCCGTCGGCGACACCTGTCGGACACGTGGACATGCAAGACCACTCACCAACACGGACCCTACTTACCAACTCGTCCATACACAGGACGGACCTTTCAGATTCGCACATAAAGTATGGCGACATCAAGAAAGAAATCGATATCAAATTCGAAACGCTACGATCGTACGACCAGGATTCCTTGCTGGACATCGATACCTCCCGCATGTCCGGACATGACCATTCCATGGACAGCCACGAAGACACCGACCAGAATTTACACCACACCACCATGATGATCACACCGGAACTTATGGGTATTATGCCGGGTGCTTCACACCGAATGGagcaACTAGATCACCTAGGTAAAACAAATGGTCACGTGGATCACCTACCGGGAACCCGGCACGGGGGAGGACCGAAAACTTGGACGCAGGACGATATGGAGTTGGCCTTAGACGCTTTGAGGAATCACAATATGAGCTTAACCAAAGCTTCCGCAACGTATGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGCCTCGGCATCGACACGCCGAAGAAGGAGGGCCCGACGAAGTCGTGGACGGAGGAGAACCTGAATTCCGCCCTGGAGGCACTGCGGACGGGGACGATATCGGCGAACAAAGCGAGTAAGGCGTACGGGATACCGAGCAGCACCTTGTACAAAATCGCCAGGAGGGAGGGTATACGGCTGGCGGCGCCGTTCAACGCGGCGCCCACCACGTGGACGCCGGAGGACCTGGAGAAGGCGCTGGAGTCGATCAGGTCGGGGCAGACGTCGGTGCAGAGGGCGTCGACGGAGTACGGCATTCCCACCGGCACGCTGTACGGACGGTGTAAGCGGGAAGGGATCGAGCTGTCGAGGTCGAATCCTACGCCGTGGTCCGAGGACGCCATGGGTGAAGCTTTAGAGGCAGTGAGATTAGGACATATGTCGATAAACCAAGCGGCTATACACTACAACCTGCCATATTCATCCCTGTACGGACGTTTCAAACGGGGCATAAAGTACTCAGAAACGGACCCGATCGACCCCAACACCGACAGCCAGTCACAGATGGAGGGCCAGCCGCACATGATGGACTACAGCACGCACCAAATCCAGTACCAGAACCAGAACAGCTGA
- Protein Sequence
- MVRKPRHAYYSASFLNGPLHSRLLSLHPTAKPYISRSLLKTADQLKIKGLCESPDENENQEDPSSSPSSPFPFAAREFPKLPKLEFSPRHHPATATAESNNNRKHKYRKPEKIVASQEEDNKETEKETQEPNGGESSDEENAAKPVLSSNEERRRKQVTPVQNKPINMSSNALLAGQLNHTNTLTINITCLQLTQMLFSQFGVDNEDFPPEPPAPSATPVGHVDMQDHSPTRTLLTNSSIHRTDLSDSHIKYGDIKKEIDIKFETLRSYDQDSLLDIDTSRMSGHDHSMDSHEDTDQNLHHTTMMITPELMGIMPGASHRMEQLDHLGKTNGHVDHLPGTRHGGGPKTWTQDDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYSETDPIDPNTDSQSQMEGQPHMMDYSTHQIQYQNQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186104;
- 90% Identity
- -
- 80% Identity
- -