Pcog059290.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- dmd-4
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000337.1:1299943-1313865[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-25 1.1e-20 75.5 10.8 1 47 10 56 10 56 0.98 2 2 0.0076 3.6e+02 3.5 0.6 29 36 234 241 232 247 0.80
Sequence Information
- Coding Sequence
- ATGCTGGCGAGCGGCGGAAGGTCGGCGAGGGTGCCCAAGTGCGCCAGGTGCCGGAATCACGGGATGATTTCCACTCTCAGAGGTCATAAGAAGCAGTGCATTTATAAGAATTGTTCTTGTGCGAAATGCGGGTTGATTAAGGAGCGACAGAGGATTATGGCTGCTCAGGTTGCTTTAAAAAGACAACAAGCAGCAGAAGATGCAATCGCCCTACATCTAGCCTCAGCAGAAAGCGGCACCACCTACGAATACCTCCCACCAGGCCGCATCTTCGGAATGCAAGTAACCTCCCCGGAACCCGACCGCCCAGAACCATCCCCCGAACAAGCAGAACCGACCTCTTCAACATCAACCCCAGAAGAAATAACCGTTAGCCCGGCCTCAATAGAAATGCTAACCAAACTCTTCCCCAACAAAAAGCGGACCGTTTTGGAACTGGTCCTCAAACGCTGCAACCACGATCTTCTCAAAGCAATCGAGCACTTTAATTTAGCGAGGGGTTCTTCTAAAGATGATTTAAAGGATGAGCAAGGGTCTGCTTTCAAGCCGGTTCAGAAGCTCGGTAAGATTAATTCGGCGCATTCCACACCGATTAGTTTGATGGCTGGGAATAAGGTTTTTATGCATAGTCTGTACCCGTTTTTGCCGCTTTTTAACCCCCAACCGGTTCTGCCTAGTCCCGTTTACGTTCCTGGCTTTTGCGAGTGCGAGCAGTGTAAACATGGTTTGTACAGAGTCGAGCCTAGGATTTAA
- Protein Sequence
- MLASGGRSARVPKCARCRNHGMISTLRGHKKQCIYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYEYLPPGRIFGMQVTSPEPDRPEPSPEQAEPTSSTSTPEEITVSPASIEMLTKLFPNKKRTVLELVLKRCNHDLLKAIEHFNLARGSSKDDLKDEQGSAFKPVQKLGKINSAHSTPISLMAGNKVFMHSLYPFLPLFNPQPVLPSPVYVPGFCECEQCKHGLYRVEPRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01400405;
- 90% Identity
- iTF_01186235; iTF_01096663;
- 80% Identity
- -