Pcog015868.1
Basic Information
- Insect
- Philonthus cognatus
- Gene Symbol
- Sub1
- Assembly
- GCA_932526485.1
- Location
- CAKOBG010000078.1:2209705-2214427[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.58 5.5e+04 -3.9 0.6 33 37 30 34 27 37 0.49 2 2 3.3e-28 3.1e-23 83.3 1.1 1 51 50 100 50 101 0.98
Sequence Information
- Coding Sequence
- ATGCCGAAATCAAAGCCCAGGAAGCCCTCCACCTCCTCGTCCGACTCAGACTCTGGCCCCGATGATAGAGGTCCAGTGAAAAAGGCGAAGCCTACAGAAAAGCCAACGAAAGCCAGCGGTGGAGGCGGTGGCGGCGACGAACTCTCCTGGGACTTGGGTAAAAACCGTTTCGTAAAGCTCTCCGAGTTCAAAGGCAAGTGGTACGTCAACATCCGAGAATTCTACCTGGCCGACGGCGACCTAAAGCCGGGCAAGAAGGGCATCATGCTTACGATGGAGCAGTGGCAGAAATTCAAGAGCTTCTTACCCGATATCGACGAAGCCGTCAAGAAAAATGTTTAA
- Protein Sequence
- MPKSKPRKPSTSSSDSDSGPDDRGPVKKAKPTEKPTKASGGGGGGDELSWDLGKNRFVKLSEFKGKWYVNIREFYLADGDLKPGKKGIMLTMEQWQKFKSFLPDIDEAVKKNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096648;
- 90% Identity
- -
- 80% Identity
- -