Basic Information

Insect: Philonicus albiceps
Gene Symbol: -
Assembly: GCA_963969385.1
Location: OZ017774.1:37293548-37295791[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.6e-06 0.00095 20.3 0.7 2 23 188 209 187 209 0.97

2 12 4.6e-05 0.0066 17.7 1.7 1 23 216 238 216 238 0.96

3 12 2e-06 0.00029 21.9 0.8 1 23 255 277 255 277 0.99

4 12 2e-05 0.0029 18.8 2.4 1 23 286 308 286 308 0.98

5 12 1.8e-06 0.00026 22.1 0.5 1 23 314 336 314 336 0.97

6 12 2.9e-06 0.00042 21.4 3.4 1 23 342 364 342 364 0.98

7 12 4.7e-06 0.00068 20.8 0.5 1 23 370 392 370 392 0.95

8 12 0.00049 0.071 14.4 0.6 1 23 398 420 398 420 0.98

9 12 9.1e-06 0.0013 19.9 0.2 1 23 426 448 426 448 0.98

10 12 4.5e-07 6.5e-05 24.0 2.7 1 23 454 476 454 476 0.99

11 12 1e-06 0.00015 22.8 0.3 1 23 482 504 482 504 0.97

12 12 2.5e-05 0.0035 18.5 0.4 1 23 510 532 510 532 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.6e-06	0.00095	20.3	0.7	2	23	188	209	187	209	0.97
2	12	4.6e-05	0.0066	17.7	1.7	1	23	216	238	216	238	0.96
3	12	2e-06	0.00029	21.9	0.8	1	23	255	277	255	277	0.99
4	12	2e-05	0.0029	18.8	2.4	1	23	286	308	286	308	0.98
5	12	1.8e-06	0.00026	22.1	0.5	1	23	314	336	314	336	0.97
6	12	2.9e-06	0.00042	21.4	3.4	1	23	342	364	342	364	0.98
7	12	4.7e-06	0.00068	20.8	0.5	1	23	370	392	370	392	0.95
8	12	0.00049	0.071	14.4	0.6	1	23	398	420	398	420	0.98
9	12	9.1e-06	0.0013	19.9	0.2	1	23	426	448	426	448	0.98
10	12	4.5e-07	6.5e-05	24.0	2.7	1	23	454	476	454	476	0.99
11	12	1e-06	0.00015	22.8	0.3	1	23	482	504	482	504	0.97
12	12	2.5e-05	0.0035	18.5	0.4	1	23	510	532	510	532	0.98

Sequence Information

Coding Sequence: ATGCAGGCGAATAAACTAGATATTCGACACACTTGTAGAGCTTGCATGTCTTCCGATAATTATCTGCATGAGATCTTTGAATTGGGGGTGAATTCTATACTAATCTCAACAATGTTGGAGAGCACTGCGATGATCAGTGTACAGCCCGATGATGCTTTACCCAAGCAAATTTGTGAGTTTTGCCTAAATTCACTTGTGAACGCTTATCAATTCCAACAGAAGTGCATAAACTCTGATATTAAACTGAGAGCTGGACTACAAGAGAAAACGGACGATGATGAAGTGCGGAAAACATTGCTGGAAATTGTGCCGGAATTTATCAATGATGCCAAAGAGCAAGAACACAAATTTGTTGTTCAGAAAGAAGCTAACGATGCACTAAGCTGTAGAGAAGCCACCCTAACTGAGCCTAATCAGGGCATCAAAGAAgaaactttattcaaaattgaaaaggcGGAGGATGAGCTAGTAAAAACGCAGCCAGCTACAGAGGAAGACATTTCGTCCGAGGACAACACAGAGAAtaaaaacgCCGATGAGACTCCACTGAGTGATTCCTTAGAATGCCCAGTGTGCCTTAAAACTTTCGACAGGAAATATCGCCTAAAGCGGCACCTCAACGTACACAACGTTATGGGGAAACCGTTCGAGTGTGAAGTATGTAAGCAGCGTTTCACTTCTGGGAGTCATCTAACGCGCCACTCAATTGTCCACAGCGGCAAACTTTCCGAGATGTCGGAAACCATAAACCGTCCAGATAACTACAAATGCCCGGAATGTTCGAAAGTCTTCTGGAAGCAGGAATCGCTTTCGTCCCATATGCGGACTCATAAAGATGCAAGAAAGGACAAGGAGTACCATTGCGAGTTTTGCCCAAAGGTCTACTCACGACTGAATCTACTAACGAGGCATGTTAAATCCCACAAGGAAATGAGGCAGCACATGTGCAAGATTTGTGGGAAGACTTTTGCTTTAAGCGCACAGTTGATTGATCATATCAACAGGCATAATGGGATTAAACCACATGTATGTCCCGTTTGTGATAAAGGTTTCCAGCAATCATGCACACTAAAGGATCATATGCGAACTCATAGCGGCGAACAGCCGTTTTTATGCTTTGAATGCGGAAAAGCGTTCAATAATGGCAGTAATCTTCGCCAGCATCTCATACGGCACACCGGAGTAAAACCATTCCCGTGCCCCGAATGTCCAAGTCGATTCACCTGCAAAGGTGGGCTCAAATCTCACATGGCAACTCATTCCGCGATCAAGCCTTATATTTGTGATATGTGCGGGTCCGCATTTACGAAACCATACTCCCTTGCAAAACACAAACGTATTCATACCGGAGAGCGACCATACTCCTGCGACGTGTGTGATATGAGaTTTAACTCATCTGATCACGTTAAGCGACACATGAGGACTCATACTGGCGAAAAACCCTATGCCTGCAAATTCTGCGATCGTGCCTTTGCCCAAAGCAACGATTTAGTGAAACATATGCGAGCTCATGTTGGGGAAAACACTTATCAATGTCACGAGTGTGCGGCAGCTTTTCGATTAAATTCAGAGCTTAAGGCACATATTCAGCAACATTTCAAACAGCAAAAGGTTACAGAGTCGTCCGATACCAATTCGAATTCTCAGGATAGTTTGGTTACAACAACTGGGGTTTCAATGCAAGTCCTGAATAAAATCATCTGA
Protein Sequence: MQANKLDIRHTCRACMSSDNYLHEIFELGVNSILISTMLESTAMISVQPDDALPKQICEFCLNSLVNAYQFQQKCINSDIKLRAGLQEKTDDDEVRKTLLEIVPEFINDAKEQEHKFVVQKEANDALSCREATLTEPNQGIKEETLFKIEKAEDELVKTQPATEEDISSEDNTENKNADETPLSDSLECPVCLKTFDRKYRLKRHLNVHNVMGKPFECEVCKQRFTSGSHLTRHSIVHSGKLSEMSETINRPDNYKCPECSKVFWKQESLSSHMRTHKDARKDKEYHCEFCPKVYSRLNLLTRHVKSHKEMRQHMCKICGKTFALSAQLIDHINRHNGIKPHVCPVCDKGFQQSCTLKDHMRTHSGEQPFLCFECGKAFNNGSNLRQHLIRHTGVKPFPCPECPSRFTCKGGLKSHMATHSAIKPYICDMCGSAFTKPYSLAKHKRIHTGERPYSCDVCDMRFNSSDHVKRHMRTHTGEKPYACKFCDRAFAQSNDLVKHMRAHVGENTYQCHECAAAFRLNSELKAHIQQHFKQQKVTESSDTNSNSQDSLVTTTGVSMQVLNKII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01049838;
90% Identity: iTF_00717961;
80% Identity: -