Palb022877.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philonicus albiceps
Gene Symbol
Hr39
Assembly
GCA_963969385.1
Location
OZ017775.1:7813377-7817406[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 3.3e+04 -6.5 6.5 173 173 190 190 28 278 0.54
2 4 0.39 6.4e+03 -3.0 1.4 62 103 230 253 203 299 0.45
3 4 2e-11 3.2e-07 31.0 0.0 1 39 409 448 409 473 0.82
4 4 2.7e-79 4.5e-75 254.5 0.1 155 408 469 733 459 733 0.91

Sequence Information

Coding Sequence
atGTCTGCTCCTCTTGGGGATGTATCCCCAAATGTAGCTAGTCCGAATAGCTCAATGCTTAGCACCAGTGGTCCCACCGGAAATTTGGCCTCAGTGCGCAGCAATATCTCAGTCACAAGCATAAAATGCGAGGAGAACGGGAGACCGCCCTCCGCCCCAGCGGCGACAACCACAAATTCAACTCTTAATGGCATACCAAAcagtaataatttctttaatggtGGTGTCCGAATTTCTGTCCCGAAGGTCGAGGACTCAGAGGAGTCGGAATCGGAATTGTCGATAATCGAAAGTTCGAAGGTCAACAGAAGACCGAATCCAAATAGTAAGAATGGACCTCGTCCAATGTCCTGGGAGGGTGAACTGTCCGAAGCCGAGGATATAATGGACACTGAGAACTCTGTGAGCAATGATAAACAGTTCGATGATTCCCATATGTCGATCAAGGACGAGTCAACGTCTTCAGCTACTATAAAGCCCGAATACGATCATATTTCCGTGGACACGGGAGCGGGCGTGATATTCACATCGGgatcaaaaaaatttcagagtgaTATAGTTAACCTCAAGTATGAGCCAGGACTTACAGATCCAGCGACAAGCGGTCTGAACTCCCCCTTACTTGCTAGATCTAAGACAAATCTCCTTCCGGCCAATCCCAGTCCAGATTCAGCTATTCATTCCGTTTATACGCACAGTTCGCCTAGCCAATCGCCGCTGACATCACGACACGCCCCCTACACCCCATCGTTGAGCAGAAATAATAGCGACGCTTCCCACAGCAGCTGCTACTCGTACAGTTCCGAGTTTAGTCCCACCCACTCACCGATTCAAGGTCGGCACAATGTCTACGGAAATTTTAATGGGTCCCTGCACCATCCCATTCTGTATCGGCCTGTCCTAGACAATGAGACGCAATCCCTTCCAACGACCCCACGGAGGCCAGATGAGGTCATAATCGAGACCGATGCAATTCCATCAGCTGGAATTTCTAGGCAGCAGCTCATTAATAGCCCGTGCCCCATTTGCGGAGACAAAATATCGGGTTTCCACTATGGCATTTTCTCCTGTGAGTCCTGTAAGGGGTTCTTTAAAAGGACTGTACAAAACAGGAAGAACTACGTCTGCGTCCGAGGAGGACCTTGTCCAGTAACAATTTCCACCCGGAAAAAATGCCCAGCATGCCGTTTCGACAAGTGCCTACAGAAGGGCATGAAGCTCGAAGCTATCCGAGAAGATCGGACTCGTGGGGGCCGGTCTACTTACCAATGCTCGTACACCCTCCCTAATTCAATGCTCAGCCCTCTAATGAGCCCCGACGCCAGCTGCTCTCAGGCGAATCAGCGAGTCGGGATTAATGGATGCATCGTCAAAACTGAACTGCCGGACACAAGCAATGggaacagcaacagcagcactGGAGTCAGTGGACACCGGAGCACTATCCCACCGCTTCTTCAGGAAATTATGGACGTGGAACACCTATGGCAGTATAATGAAGGTGAATTATCCAGACTCAATCAGCCGCCCACCGCTGGCGCAGACTCTGGAAATTTGTCAGCGAATCCCCTTCTGGCGAGCACTGGACTATCGTCGAATGGAGAGAACACCAATCCTGATCTAATCGCAAATCTTTGTACAGTCGCTGACCATCGATTGTACAAGATCGTCAAGTGGTGCAAGAGTTTGCCACTGTTCAAACATATTTCGatCGACGATCAAATATGTTTGCTCATCAATTCGTGGTGTGAATTACTCCTCTTTTCGTGTTGCTTCCGATCGATAGCAACACCtggagaaataaaaatttcacaaggGAAATCTATCACACTTGAACAGGCTAAATCCAGCGGTCTAcagGCCTGCATTGAGAGAATGCTTAACCTGACTGATCATTTACGGCGCCTTCGTGTCGATCGATATGAGTACGTTGCCATGAAAGTAATAGTTCTGCTACAATccgATACTTCGGAGTTGCGAGAACCGGTTAAAGTGCGTGAGAGTCAAGAGAAAGCATTGCAAGCCCTGCAAGCATACACTTTAGCTCACTATCCAGATTCGCCGGCTAAGTTCGGTGAATTACTTCTTCGAATTCCAGAACTACAGAGAACGTGCCAGctCGGTAAGGAAATGTtgacaataaaatcaaaagacgGTGAAGATTTCAACTTGCTAATGGAGCTGCTGCGCGGGGAACATTGA
Protein Sequence
MSAPLGDVSPNVASPNSSMLSTSGPTGNLASVRSNISVTSIKCEENGRPPSAPAATTTNSTLNGIPNSNNFFNGGVRISVPKVEDSEESESELSIIESSKVNRRPNPNSKNGPRPMSWEGELSEAEDIMDTENSVSNDKQFDDSHMSIKDESTSSATIKPEYDHISVDTGAGVIFTSGSKKFQSDIVNLKYEPGLTDPATSGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNVYGNFNGSLHHPILYRPVLDNETQSLPTTPRRPDEVIIETDAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLMSPDASCSQANQRVGINGCIVKTELPDTSNGNSNSSTGVSGHRSTIPPLLQEIMDVEHLWQYNEGELSRLNQPPTAGADSGNLSANPLLASTGLSSNGENTNPDLIANLCTVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSIATPGEIKISQGKSITLEQAKSSGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPDSPAKFGELLLRIPELQRTCQLGKEMLTIKSKDGEDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00424727;
90% Identity
iTF_00424727;
80% Identity
iTF_01183898;