Ptra025663.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Philereme transversata
Gene Symbol
-
Assembly
GCA_963924445.1
Location
OZ004350.1:5280160-5292707[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.19 19 7.0 5.3 1 23 198 221 198 221 0.92
2 30 0.00087 0.085 14.4 0.4 2 21 252 271 251 272 0.93
3 30 0.0011 0.11 14.1 0.5 2 23 307 329 307 329 0.97
4 30 0.00011 0.011 17.3 1.2 1 23 377 400 377 400 0.96
5 30 0.048 4.7 8.9 0.1 1 23 421 443 421 443 0.97
6 30 0.0089 0.88 11.2 2.9 2 23 493 514 493 514 0.97
7 30 0.00024 0.023 16.2 2.0 2 23 560 582 560 582 0.97
8 30 0.00024 0.024 16.2 1.3 1 23 632 655 632 655 0.97
9 30 0.00033 0.032 15.7 0.1 1 23 710 732 710 732 0.97
10 30 0.00016 0.016 16.7 4.4 1 23 743 765 743 765 0.98
11 30 0.073 7.2 8.4 1.1 2 23 777 798 776 798 0.96
12 30 0.005 0.49 12.0 0.9 1 23 808 830 808 830 0.98
13 30 1.5 1.4e+02 4.3 4.1 1 21 859 879 859 881 0.86
14 30 0.0062 0.61 11.7 7.8 1 23 892 914 892 914 0.98
15 30 0.0024 0.24 13.0 1.5 1 23 922 944 922 944 0.96
16 30 0.00081 0.079 14.5 0.2 2 23 964 986 963 986 0.97
17 30 0.058 5.7 8.7 2.2 1 23 1004 1026 1004 1026 0.97
18 30 0.38 37 6.1 0.8 2 23 1067 1089 1066 1089 0.92
19 30 0.021 2.1 10.0 0.2 2 23 1112 1133 1111 1133 0.95
20 30 0.41 40 6.0 0.3 2 20 1137 1155 1136 1156 0.92
21 30 0.92 90 4.9 1.2 2 23 1176 1198 1175 1198 0.94
22 30 0.027 2.6 9.7 0.1 2 23 1214 1235 1213 1235 0.91
23 30 0.015 1.5 10.5 2.1 5 23 1245 1263 1243 1263 0.94
24 30 0.0013 0.12 13.9 1.3 2 23 1274 1296 1273 1296 0.95
25 30 0.23 23 6.8 3.4 2 23 1313 1331 1313 1331 0.93
26 30 1.8 1.8e+02 4.0 3.0 2 21 1335 1354 1334 1355 0.93
27 30 0.47 47 5.8 0.9 2 23 1403 1424 1402 1424 0.93
28 30 0.0017 0.16 13.5 0.7 2 23 1435 1457 1434 1457 0.96
29 30 2 2e+02 3.8 0.6 2 23 1473 1491 1473 1491 0.79
30 30 0.26 26 6.6 4.3 2 21 1495 1514 1494 1515 0.95

Sequence Information

Coding Sequence
ATGGCCCTTAAACTTGGAAAATGTAGGCTCTGCCTCAAGCTCGGGGACTTCTACTCGATCTTCACAGAAGACAATGGTATCCAGCTTTCCGATATGGTCATGGAATGTTCTACAATCAAGGTGTACGATGGAGATGGACTACCAGACAAAGTGTGTGCTGAATGCATTCAGAAACTCAGCAGCGCCTACATATTCAAGCAGCAGTGTGAGAGGTCTGATCAGGAGCTGAGGCGGAACTATGTCCCTCCACCAGGATTCAGTATCAGTCCACCACCGCCAACAAACCGACAAAGCAGCGACTCAGCCTTCTCAACCCACACTGACAGCTCTAACTTAAAGTCATCTTTCATCGAAAACAAAGTAACACCCGTCAGCAGACACAGAAAAAGAAGTGTCGAAAGCGACAATGTATCACTCGGTAGCCGGTCTCAGGAGAGCTGCCGACCCAGCACCACCAAGCGGGTTGAGGAACTAAGAAAAACACAAAAGCCTAAACGTCCGCGGTACTCCGCCGACTCCGACTACGAAGATAATGGAGTTTCCAGCTACATTAACGAAACTGATTCGGACGAACCTCTCCTTAAAAACGAACACATGTGCCCCCACTGCCCAAAGACTTTTAAATGGATGAAGAGTATGAAGATACACATGTCTCACATGCACACGGGGAAGAGAGCGATTGCCCGGCAAGAGGTAGCTGTAAAAATTCCGATACAACAAAACATGGATGTCGAAAGCGACGACGATCAGATGAGCTGCGAAAAATGCGGCAAAAAGTTCAAACTGAAGATCATGCTCAATCGTCACCTGGAGTCGTGCCAGAGTTCACCAGCGAAGCCGACAGCCACATCACCGATGAAGGAGTTGGTGATCACTCTAGAGCCGATAGACGCGGTGCCGCAACGCGCGAATAAGCCGACTTGCCAATACTGCACGGCCCAGTTCAAGACCGTCGATAACTTAGATAAGCATCTGAGAGTGGTTCATGCGGCAACTCGTAAGAAAGTAAAATCGGAAAACGTACCAAGAGGACCTCTAATATGCATCTATTGCAGTAAAGATTTCCAAGATTACTATGTGTACAGCTCGCATTTTAATGGCTGCCCGATGAAAGAGAACCTGTCTGATTTCCAATGTCCTATGTGCCCGAAGGTCTGTACTCGAGCGAGCTCTTACGTTAGCCACGTCAAAAACAGCCATTATCTGCGGTCTGCGAAACTGGAAGAATCTTCTCCGAGTCTGAGTCCAGTGGCTCAAGCGTTTGAATGCCGCATGTGTAGTATAAAGCTCGCCACGCAAGATCTGCTGCTCTCGCACTTGGCTAGCCACGTGCCTAATGATGACGGCGATAACAATGCGGCcgctgatgataatgattttgaTGCCAGAGATGACACGTTAGCTGATGACTCCATGTCGATCCATTCCGCGCACAGCTCACAAGTCTCGTTCTCGGGGTCGCTACAGGCGCCTGCCAAATGTCGCTTTTGCGACAAAGAGTTCAAATACAGAAAGTCTCTCTTATCACACGAGCTGAAGCACACCGAAGAGAAAGTACCCGTGAAAGTCGAACTTCCCGATAAACCAGCACAGCCAGATCTACTCACAGAGACAAACCAGGACTTCAACAAAGAGTTCGACTCGGAATCTAGTCAAGACGACGGGGACGAAGACAATACGTGCGATATCTGTGAGAAGCAATTCTCGTACAAACGGTTACTGATACAGCATAAGCGCACGAAGCACACCATGGTAGCCGGGATGAAGCGGGCGAAAATAAGCCTTAAAGACTGCTCCGTAAAGTGTCTCATCTGCGAAGAAGAGATGAAAGTGAGCGCCATCAATGAGCACAATCAGAAGCATATTTCGGTTAACATCAAGCCGAGGAATATTTATACTTGTGCTGAATGCGCACAGAAGTTTAAGAGCTGCAGCAACTTGGCTAATCACATCAAGCTGGTTCATAGATTGAAGCAACAAGAGGTGCCAAAGCAGTTTGCAGGCGTGGATATGGCGGATTTTTGTGAGGTCGTTGTGACAAAAACGGAACCCCGGGACGAATCCCAGAGTCACAACGGCTTTGGAGAGGTTCCGCAGGATGCAGCGCCGACAGTGAACCTGACCGGGTTTACGTGCCCCATCTGTGGGAAGAAGATGCCCACACTCGTGTCATTAAAACGACACGTCAACTGGCACTCGTTTGTGGGGAGCAATCTGGAGTCGAAATACGAGTGTTTCGTGTGTAAGGAGACCTTCAAATTCAAAGGGCATTTTAAGATCCACATGCGCCTGCACTACCGGGACACAAACCTGGACCCAAAGCTCCTcacctgctccatctgtcagcGCAAGAGTAAGCACCTCCGCGCGGCGCAGGCGCACATGAACTGGCACAAACAAACCCGCTTCCAGACTAAAGACTACCAGTGCTCCATTTGCAAGCGAGTCTTCCAGTACCGCAGAGTCTACCTCTCTCACATGGCGATACACTACAAGAAGGGAGAGAGCGGACAGAACACCATAGTCGGGGATATAGTTGCCAACAATCAAGACCGGACCATGTTCGACGGCACTTTCACCTGCCAGCTCTGCGGCAAGGTGTGCGACTCGGAAAACTCACTCAAGTGCCACAGCAGCTGGCACAGATCCAAGACGCTGCTCTACGGAGCGCGCCACGAGTGCCAAATGTGCCATCTTCAGTTCACTAACAAACGACATTTGGAGCTGCACACTCGCTCGCATTACGAAGATCCTAACGGCGAGTTCAAATGCAAAATATGCGGCAAGGGATTCATTGATGAGGAGTATCATCGGCGACACGTGAAGGGTCACAATTTTGACCACCAGTCTCACAAGAATAGACTGGAAGCCCTGCGGAAGGGTAAGGTCAAGTGTCCGATCTGCAGTCGGTACTATCCGGATCTAGTGAAGCTTATCCGCCATCTGCGACGCACTCATCCCGAGAGCAAGATGATCAAGGAGGACCCCGACGCGCCCCCGCCCAAGTATTACTCGTGCAGGCTGTGCGCGAAGTCCTTCTACGACGAGAAACGATTCAAAAGGCACGAGGAATCACATCTGCGGAAACCCAGCTTCTTCAAATGCAAGTTCTGTGGTTACAAAACCatgtccatgaaggcgcaccaCCTGCATATCAAGAATAAACATATGACCAAGAAGTATGTGGAGAATCCTTTGAAGTGCAGTCAGTGCGACGAGGTGTTCATCTGGGGCTACGCGCTGCATCACCACTTGCGCGATGTTCACGATATCAACGAGGATTGGATCGCCGAGCGCACGGAAGCCACGCTCGAGGGGCCGCTCAAAGACCTGCAATGCTCCGTCTGCATGAAGGTTCTCGCGAGCAAAGGCAACTTCGAACGACACATCGACTATCACAACACTCTACGCTGCAACTACTGCTTCGAATACTTCAGCACGCTGCGCTTTCTCGAAGGCCACCTGGCTTTCACGTGCGACAAGAGGACCCTCGTCGGAGACGCGGACCCCTATCCGAAGCGAGTCAAATGCGAAATATGCTACAAGGCATTTGGCTTGCAAGTCAAGTTAGACTGTCATCTTAGAACTCAGCACAACATCATAGTGAACAAGGAACAGAGCGCCGGCAGACAGGAGCTCGTCTGCGACTACTGCTTCAAAGTGTTCGAGAACGAATACGCGCTAGCCGGGCACAAAGTGTACCACCGGACCATCGGCTACTTCGGCTGTATCTACTGCCCGAAGAAGTTTAACACTCAGACCGCCTTCAGGAAGCACAAGAACAACCACTTCACTACGCACAACGTCGATAACCCCACGAAATGCGAGCATTGCGACGAAACATTCGTCCAGTTCCGCGAGATGATATACCACATGCGGGACGTGCACGGCGACGACAAAGAATGGATCATCATGCCCAAAGATTCCATCGAGGAAACGTGCCCGATCTGTCAGAAGACGTTCTTCAATCTGCACAAGCACATGGACTATCACGAGGAGAACAAGTGCAAGAAGTGCCACGAATACTTCTACTCGACGGCGGACTTCGACAACCACCTGTGCGCGATCGACAGCGACGCGGAGGAAGCCGCGGGCGTCGTGAACCCCGGTGTGCCCTATCAGGAATGCAAGTTCTGCTTCAAGCCGATCACCAAGAAGGACTCCAAGAAGAAACACGACATGCTACACGGCACCTCGGGAGCGATATCGTGTAGATTCTGCTATCTGAAGTTCAAGACGCTGGACGCGTTCAACATCCACGCTTTCTCGCATCGCAGCAGGAAATACAACAAGAAACCTATAAAATGCCGCATCTGCAAGGAGCGCTTCGTCAGGTACGGCGTGTTCATGCGGCACATGAAGAGCGCGCACAAGTGCGTGAAGAAGACGCACTACCGCGCGCTCGTGCGCCCCGAGCGCTGCGTCATCTGCGGCGAGGAGTTCCCTAACCTGCACAACCACTACCGCGCGCATCTGGCCAATCAGTGCCagttctgcttcaaatactttACCTCCTCCAAATACTTCGCCAAGCACCAGTGCGATAAAATAGACGAGGACAACACTAAAGTGTTTACTTCGGACGAAAACATCAGCGCCCTCATCAACAGCTACACTCCCAGGGACCTGAAGGACGACGAGAAGTACTATGGTTACACGGACGACGACGAGGACGTCGAGACGGACTTGCCGCTGGCGATGACGCAAGATAACAAGGTGACGAACGGCCCTTACTCTAACAAAGAGAAGCCGATGCAAGCCAGTCAGGAGGCGGATTACGAACGCGACCTGCACATGATGGTGCAGTCGCCGATCATATCGGATGTGCTGTCGCTGTTCCAAGCTGACGAGGAAACTCAAGATCGCAAGAGCCAAAGATTTCTGGGAGAAATTGTGAGTCTCACTGATGATGATTCGATGGATATGAACGATGTTGCGGCGCCCGTTGTTATAATTGATGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTEDNGIQLSDMVMECSTIKVYDGDGLPDKVCAECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPTNRQSSDSAFSTHTDSSNLKSSFIENKVTPVSRHRKRSVESDNVSLGSRSQESCRPSTTKRVEELRKTQKPKRPRYSADSDYEDNGVSSYINETDSDEPLLKNEHMCPHCPKTFKWMKSMKIHMSHMHTGKRAIARQEVAVKIPIQQNMDVESDDDQMSCEKCGKKFKLKIMLNRHLESCQSSPAKPTATSPMKELVITLEPIDAVPQRANKPTCQYCTAQFKTVDNLDKHLRVVHAATRKKVKSENVPRGPLICIYCSKDFQDYYVYSSHFNGCPMKENLSDFQCPMCPKVCTRASSYVSHVKNSHYLRSAKLEESSPSLSPVAQAFECRMCSIKLATQDLLLSHLASHVPNDDGDNNAAADDNDFDARDDTLADDSMSIHSAHSSQVSFSGSLQAPAKCRFCDKEFKYRKSLLSHELKHTEEKVPVKVELPDKPAQPDLLTETNQDFNKEFDSESSQDDGDEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVKCLICEEEMKVSAINEHNQKHISVNIKPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQQEVPKQFAGVDMADFCEVVVTKTEPRDESQSHNGFGEVPQDAAPTVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGSNLESKYECFVCKETFKFKGHFKIHMRLHYRDTNLDPKLLTCSICQRKSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGDIVANNQDRTMFDGTFTCQLCGKVCDSENSLKCHSSWHRSKTLLYGARHECQMCHLQFTNKRHLELHTRSHYEDPNGEFKCKICGKGFIDEEYHRRHVKGHNFDHQSHKNRLEALRKGKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPKYYSCRLCAKSFYDEKRFKRHEESHLRKPSFFKCKFCGYKTMSMKAHHLHIKNKHMTKKYVENPLKCSQCDEVFIWGYALHHHLRDVHDINEDWIAERTEATLEGPLKDLQCSVCMKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAFTCDKRTLVGDADPYPKRVKCEICYKAFGLQVKLDCHLRTQHNIIVNKEQSAGRQELVCDYCFKVFENEYALAGHKVYHRTIGYFGCIYCPKKFNTQTAFRKHKNNHFTTHNVDNPTKCEHCDETFVQFREMIYHMRDVHGDDKEWIIMPKDSIEETCPICQKTFFNLHKHMDYHEENKCKKCHEYFYSTADFDNHLCAIDSDAEEAAGVVNPGVPYQECKFCFKPITKKDSKKKHDMLHGTSGAISCRFCYLKFKTLDAFNIHAFSHRSRKYNKKPIKCRICKERFVRYGVFMRHMKSAHKCVKKTHYRALVRPERCVICGEEFPNLHNHYRAHLANQCQFCFKYFTSSKYFAKHQCDKIDEDNTKVFTSDENISALINSYTPRDLKDDEKYYGYTDDDEDVETDLPLAMTQDNKVTNGPYSNKEKPMQASQEADYERDLHMMVQSPIISDVLSLFQADEETQDRKSQRFLGEIVSLTDDDSMDMNDVAAPVVIIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01170802;
90% Identity
-
80% Identity
-