Basic Information

Insect: Philaethria dido
Gene Symbol: -
Assembly: GCA_033558755.1
Location: JAKGSA010000781.1:52760-64631[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.1 2.2e+02 3.0 0.1 1 14 250 263 250 264 0.90

2 9 5.9 4.2e+02 2.1 3.0 1 23 281 303 281 303 0.90

3 9 0.0011 0.079 13.8 0.4 1 23 334 358 334 358 0.95

4 9 0.017 1.2 10.1 1.3 2 21 363 382 363 383 0.92

5 9 0.00044 0.031 15.1 1.3 2 23 399 420 398 420 0.94

6 9 0.00011 0.0078 17.0 0.3 1 23 425 447 425 447 0.98

7 9 2e-05 0.0014 19.3 4.5 1 21 456 476 456 481 0.95

8 9 0.00098 0.07 14.0 2.4 1 23 489 512 489 512 0.93

9 9 0.028 2 9.4 0.5 3 19 551 567 549 568 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.1	2.2e+02	3.0	0.1	1	14	250	263	250	264	0.90
2	9	5.9	4.2e+02	2.1	3.0	1	23	281	303	281	303	0.90
3	9	0.0011	0.079	13.8	0.4	1	23	334	358	334	358	0.95
4	9	0.017	1.2	10.1	1.3	2	21	363	382	363	383	0.92
5	9	0.00044	0.031	15.1	1.3	2	23	399	420	398	420	0.94
6	9	0.00011	0.0078	17.0	0.3	1	23	425	447	425	447	0.98
7	9	2e-05	0.0014	19.3	4.5	1	21	456	476	456	481	0.95
8	9	0.00098	0.07	14.0	2.4	1	23	489	512	489	512	0.93
9	9	0.028	2	9.4	0.5	3	19	551	567	549	568	0.89

Sequence Information

Coding Sequence: AtgaaggaaataaatattaatattgaaggTTACAATGAGAATGGCGTTTGTGTTGGCTGTTTGAATTACAACCGTcgcatgttttataataaacacgTAAAAGAATGTTTTAAACTGTTAGCCGATATTGATgtcCCCGAGGGCATAGTCATTAAAATATGTTGGGAATGTAACgcctacatatataatacaataaaattcaaacaaCAAATACTAAAATCTCATCAATCACTAATTGAATATTCGGAAAAGcatacttttttaaatgatccCACGGACTTGTCAAAGCAAGCCATACAAAGGTTTTCTAGTAATTTCTATTTGAATACAGAAGAATTGAAAGAAGAACCCGTAGTCAACGTAGATGttataaaagaagaaataacTGATACATTGGATAAAATTGAATTGGAAATACCAGAATTACCCGACTTAGACGTGAAAGAAGAAGTACATCAAGAAGAGAACATAAGTTTAGACTTTTACGAAGATCTACCTAGGCATAGTGAAACAGACGACGATATAGTTCTATCCAAACTAAAGACTGATAAAGAAGTTAAGAAGaggaaaaagaagaagaaagataGAAGAAGAAGTAAAGAAGAGAAGaaggagttaaaagacaaaaaaacgCGAAGATTACTAAACTTACCGGAAAAATTAGTGGAATTGTATACAATGAGTGAAGAAGAGATGTGGACGGTGAGAGAGAGAGATCTGTCGAGCGGAGAGTTCCAGAAGTTGAAGTACAAGTGTGAACTGTGCCTTATAGGCTTTAATACGAAAAAGTTGAAGGACTTTCATGATACTGGCAAACATTTTTCGaaagcAGACCACGACTACACATGTGATGTATGTAAAGCGCATTTCTTaacgaaagaaaatattaaatttcatagaaAATTACATCTCTCCGCttttaaatgtCGAGAATGCAATTTAATAACTACGTTAAAAAGAATAATGTTAGAACACGATTGTGCCAAGAAAATGCCAGGATACGCCTGTCCCGACTGTCCTGATAAGAAATTTAGtACTAGGTCGAAATTATCATACCACCGGACTGTGGCACATCAAGAGAAACCGCAATGTGACTGTTGTGGGAAAATATTTGCGAATAAAATGACTTTAAAATACCATTTAAAATTATTACCAAATAATAAGGAAGAGAAGCCGAATGAGAAAATGTTTATACCTTGTAAAGGCTGTAATAAAGTCTTCCACTCTAAGAAGAGCTATAGGTCTCatgttgtaATCCACGAAGGCGTAACCTATCCATGCCCAATATGTGGCAAACTGTTCCAATGGAAGAGAAACCTCGCGCGACACACTAGGAAccacagagagagagagaatggCGCTCTCTACCAATGCAGAGAGTGCGGAAAGAGTTTCTCTAGTCGAGATTGTTATAATAACCATATGAAATTGAGTAAGAAACACGTTGATGACAGCagttatatACACACGTGCAATTTTTGCGGGAAAAAGTTCGCAACAAAATGGTGTATGATAGACCACATAGATTGGGATCATTTGAAACGAATCAAATATCAATGCAGGCCATTTAAAACAGCAAAAATAATGGTGGCtcatatgaataatatacaCGAAGGGAAAAACAAAAAGGAACCGGACGGAGAGCATCTATGCGATGTGTGCGGTAAATCTTATAAGacagTAAAACGTCTAAAAGGCCACGTATGGGCGATGCATACAAACAGATCGAATACAAAGAGTTTCAAGTGCCTCTGCCCCAGTGACGTTTTCTTGCTATAA
Protein Sequence: MKEININIEGYNENGVCVGCLNYNRRMFYNKHVKECFKLLADIDVPEGIVIKICWECNAYIYNTIKFKQQILKSHQSLIEYSEKHTFLNDPTDLSKQAIQRFSSNFYLNTEELKEEPVVNVDVIKEEITDTLDKIELEIPELPDLDVKEEVHQEENISLDFYEDLPRHSETDDDIVLSKLKTDKEVKKRKKKKKDRRRSKEEKKELKDKKTRRLLNLPEKLVELYTMSEEEMWTVRERDLSSGEFQKLKYKCELCLIGFNTKKLKDFHDTGKHFSKADHDYTCDVCKAHFLTKENIKFHRKLHLSAFKCRECNLITTLKRIMLEHDCAKKMPGYACPDCPDKKFSTRSKLSYHRTVAHQEKPQCDCCGKIFANKMTLKYHLKLLPNNKEEKPNEKMFIPCKGCNKVFHSKKSYRSHVVIHEGVTYPCPICGKLFQWKRNLARHTRNHRERENGALYQCRECGKSFSSRDCYNNHMKLSKKHVDDSSYIHTCNFCGKKFATKWCMIDHIDWDHLKRIKYQCRPFKTAKIMVAHMNNIHEGKNKKEPDGEHLCDVCGKSYKTVKRLKGHVWAMHTNRSNTKSFKCLCPSDVFLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00621532;
90% Identity: iTF_00782155; iTF_00776961; iTF_00781325; iTF_00775593; iTF_00774788; iTF_00782953; iTF_00779806; iTF_00780592; iTF_00458364; iTF_00457527;
80% Identity: -