Basic Information

Gene Symbol
zfy1
Assembly
GCA_033558755.1
Location
JAKGSA010000773.1:5223-20000[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 3.4 2.4e+02 2.9 0.8 1 19 323 341 323 347 0.84
2 11 0.034 2.4 9.2 0.5 1 23 352 374 352 374 0.97
3 11 0.0016 0.11 13.3 0.7 1 23 378 401 378 401 0.97
4 11 0.095 6.7 7.8 2.1 1 23 410 432 410 432 0.94
5 11 4.1e-05 0.0029 18.3 0.6 2 23 437 459 436 459 0.92
6 11 4.6e-05 0.0033 18.2 1.3 1 23 465 487 465 487 0.97
7 11 0.61 43 5.2 1.3 6 21 505 520 502 525 0.92
8 11 0.00014 0.01 16.6 1.7 1 23 533 556 533 556 0.94
9 11 1.6e-05 0.0011 19.6 0.1 1 23 561 584 561 584 0.97
10 11 7.1e-07 5e-05 23.9 2.9 3 23 593 613 592 613 0.98
11 11 9.2e-06 0.00065 20.4 3.5 1 23 619 642 619 642 0.96

Sequence Information

Coding Sequence
atggaaaataaagaTGATATTGTAAATAATCTTTTATGTATGGCTTGTTTGTGTGTTGGGAGGTCGATATACGAAGTAAAGGAAGAGAAGTTAAAGAAATACTACTTGGATATATTAAAGGAGATTCCAttaaataacataaaagtggTGGTGCCTATAGTATGTTGGGAGTGTgaaacaattttacaaaaagtgTTAGCTTTTAGAGAGCAAGTAAAAGATTCCTtcagaatattacaaacatatactgAGAATTTAACCGAGTGCTTGCTGAGTGATGTATCAAGAACACCCCGACTAAAAGTGCACATAAACACACCTATATCTATACTGCCagacaatttaaatgaaataaagcaAGAAAATAATGATAAAGATGAATCTGAAAACCAAAACGATTGTATATCAGACGGTGAACCGAATGAAGACATACAGACAGTCATGTGCGatgttaaaagatataaaagaaagaaaaagagtgttcataaaataaaaaaagttttaaataaagtcCGCCAAGATGAAAAGGATCCTGTGGATACAACGGAAACggaaataaacataaaagatATCAAAATGAAAGACAAAaatgaacctttaaatgaaacaaatcaTACTAGAGAAGATTTAGGAAATAATGAACCGaataatcaaaatattacgaAGAACATCGATATGAAAATGGAAATTAACAATGAAGAAGAAATCGATGATATTAAATCGGAATTGGATGATAAAGatgaTAATCTAGAAGATTCTGCCTCAGAATCTGAGATGAAAGACATAGATAAGGAAATACAATCGTTTTTGGATAATGTCAAGAAAAATACAGATAagagtaagaaaaataaaaagaaatgtcatacggaaacaaaaaataaaataatatcaatagaTTTATCATATGAAGAAATGCAAGCAGAGAGATCTAAATTATCGGACACGGAGAGTTTTGTCACTGCCAAATATAAGTGTGAAAGTTGCCTTATTGTGTTCACTACTGAATTGTCGAAGAAAAGTcatgataataaaaaacatatggtaaaAGGTGATTTTATATGTTCAATATGCAAAACTATTATATCGTCTGTAGAAGCTTTTACAACGCATTATAAGAGACATATGAgaagatacGAATGTTCAACATGCGGGAAACGAACCCCGGACCTCAAAACGATACAGCAACATATATACACTAAACACAACATCGATAAAACGTTGAAGAAGTACCAGTGTAATGTGTGCGGGAAGATATCTAACTCTCTGGATACGCACAGATATCATCGTGACACTCACAAGGCGCGTGTGGAGTGTTCCCAATGTGATAAAACTTTTAGCCATCGAGCTGGATTGATGAATCATAGATTagCAGTTCATGAATCTCAAAATGAATTTCCTTGTAcggtgtgcaataaagtgtttagATGGAAAACTAGTTTGAAACGACATCTTGAGAAACATGATAATGAGAACAAAGGTACAAACACGTCTAACAGGGCCTTTTGTATATCATGCGGTATTGGCTTCTCGTCTGTGTGTTCGTTTCAACGTCATCTCAGGAACAGCTTGAAACACGTCACGCACGATCAGTTgaaattcaTCTGTGACCATTGCAACCAGAGGTTCGCAGATAAAACTAAACTACGTGATCACATAGAAGAGAAACATTTGCATAGGACCTTCCAATGTCCTATATGTAATAAGccGTCCAAGAACCGTGTGGGATTAGAACAGCATATCCGCGCGGTGCACAAAGGAAGGCCGAATAACAGAATGTGCCATCACTGCGGGAAAGGGTTTCCGacaaaAGTACAATTGGAGTCCCATATTCGCACGCACACCGGAGAGAGGCCCTTCATGTGCGAGTTCTGTCCTACGACATTCTCGCAGCAGTCCAACTTGTATAAACATCACAGGCAGgtccatttaaacataaagtccaaacgttatttatgtaagaagCGTAAACTCGACGGGAATCAAACCGGTGACCCGTTCACGCTCCCCATCATGCAGTATTTACCTGAAAACGGTTTTAGTTTATGA
Protein Sequence
MENKDDIVNNLLCMACLCVGRSIYEVKEEKLKKYYLDILKEIPLNNIKVVVPIVCWECETILQKVLAFREQVKDSFRILQTYTENLTECLLSDVSRTPRLKVHINTPISILPDNLNEIKQENNDKDESENQNDCISDGEPNEDIQTVMCDVKRYKRKKKSVHKIKKVLNKVRQDEKDPVDTTETEINIKDIKMKDKNEPLNETNHTREDLGNNEPNNQNITKNIDMKMEINNEEEIDDIKSELDDKDDNLEDSASESEMKDIDKEIQSFLDNVKKNTDKSKKNKKKCHTETKNKIISIDLSYEEMQAERSKLSDTESFVTAKYKCESCLIVFTTELSKKSHDNKKHMVKGDFICSICKTIISSVEAFTTHYKRHMRRYECSTCGKRTPDLKTIQQHIYTKHNIDKTLKKYQCNVCGKISNSLDTHRYHRDTHKARVECSQCDKTFSHRAGLMNHRLAVHESQNEFPCTVCNKVFRWKTSLKRHLEKHDNENKGTNTSNRAFCISCGIGFSSVCSFQRHLRNSLKHVTHDQLKFICDHCNQRFADKTKLRDHIEEKHLHRTFQCPICNKPSKNRVGLEQHIRAVHKGRPNNRMCHHCGKGFPTKVQLESHIRTHTGERPFMCEFCPTTFSQQSNLYKHHRQVHLNIKSKRYLCKKRKLDGNQTGDPFTLPIMQYLPENGFSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00776197;
90% Identity
iTF_01182099;
80% Identity
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