Pdid014331.2
Basic Information
- Insect
- Philaethria dido
- Gene Symbol
- zfy1
- Assembly
- GCA_033558755.1
- Location
- JAKGSA010000773.1:5223-20000[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.4 2.4e+02 2.9 0.8 1 19 323 341 323 347 0.84 2 11 0.034 2.4 9.2 0.5 1 23 352 374 352 374 0.97 3 11 0.0016 0.11 13.3 0.7 1 23 378 401 378 401 0.97 4 11 0.095 6.7 7.8 2.1 1 23 410 432 410 432 0.94 5 11 4.1e-05 0.0029 18.3 0.6 2 23 437 459 436 459 0.92 6 11 4.6e-05 0.0033 18.2 1.3 1 23 465 487 465 487 0.97 7 11 0.61 43 5.2 1.3 6 21 505 520 502 525 0.92 8 11 0.00014 0.01 16.6 1.7 1 23 533 556 533 556 0.94 9 11 1.6e-05 0.0011 19.6 0.1 1 23 561 584 561 584 0.97 10 11 7.1e-07 5e-05 23.9 2.9 3 23 593 613 592 613 0.98 11 11 9.2e-06 0.00065 20.4 3.5 1 23 619 642 619 642 0.96
Sequence Information
- Coding Sequence
- atggaaaataaagaTGATATTGTAAATAATCTTTTATGTATGGCTTGTTTGTGTGTTGGGAGGTCGATATACGAAGTAAAGGAAGAGAAGTTAAAGAAATACTACTTGGATATATTAAAGGAGATTCCAttaaataacataaaagtggTGGTGCCTATAGTATGTTGGGAGTGTgaaacaattttacaaaaagtgTTAGCTTTTAGAGAGCAAGTAAAAGATTCCTtcagaatattacaaacatatactgAGAATTTAACCGAGTGCTTGCTGAGTGATGTATCAAGAACACCCCGACTAAAAGTGCACATAAACACACCTATATCTATACTGCCagacaatttaaatgaaataaagcaAGAAAATAATGATAAAGATGAATCTGAAAACCAAAACGATTGTATATCAGACGGTGAACCGAATGAAGACATACAGACAGTCATGTGCGatgttaaaagatataaaagaaagaaaaagagtgttcataaaataaaaaaagttttaaataaagtcCGCCAAGATGAAAAGGATCCTGTGGATACAACGGAAACggaaataaacataaaagatATCAAAATGAAAGACAAAaatgaacctttaaatgaaacaaatcaTACTAGAGAAGATTTAGGAAATAATGAACCGaataatcaaaatattacgaAGAACATCGATATGAAAATGGAAATTAACAATGAAGAAGAAATCGATGATATTAAATCGGAATTGGATGATAAAGatgaTAATCTAGAAGATTCTGCCTCAGAATCTGAGATGAAAGACATAGATAAGGAAATACAATCGTTTTTGGATAATGTCAAGAAAAATACAGATAagagtaagaaaaataaaaagaaatgtcatacggaaacaaaaaataaaataatatcaatagaTTTATCATATGAAGAAATGCAAGCAGAGAGATCTAAATTATCGGACACGGAGAGTTTTGTCACTGCCAAATATAAGTGTGAAAGTTGCCTTATTGTGTTCACTACTGAATTGTCGAAGAAAAGTcatgataataaaaaacatatggtaaaAGGTGATTTTATATGTTCAATATGCAAAACTATTATATCGTCTGTAGAAGCTTTTACAACGCATTATAAGAGACATATGAgaagatacGAATGTTCAACATGCGGGAAACGAACCCCGGACCTCAAAACGATACAGCAACATATATACACTAAACACAACATCGATAAAACGTTGAAGAAGTACCAGTGTAATGTGTGCGGGAAGATATCTAACTCTCTGGATACGCACAGATATCATCGTGACACTCACAAGGCGCGTGTGGAGTGTTCCCAATGTGATAAAACTTTTAGCCATCGAGCTGGATTGATGAATCATAGATTagCAGTTCATGAATCTCAAAATGAATTTCCTTGTAcggtgtgcaataaagtgtttagATGGAAAACTAGTTTGAAACGACATCTTGAGAAACATGATAATGAGAACAAAGGTACAAACACGTCTAACAGGGCCTTTTGTATATCATGCGGTATTGGCTTCTCGTCTGTGTGTTCGTTTCAACGTCATCTCAGGAACAGCTTGAAACACGTCACGCACGATCAGTTgaaattcaTCTGTGACCATTGCAACCAGAGGTTCGCAGATAAAACTAAACTACGTGATCACATAGAAGAGAAACATTTGCATAGGACCTTCCAATGTCCTATATGTAATAAGccGTCCAAGAACCGTGTGGGATTAGAACAGCATATCCGCGCGGTGCACAAAGGAAGGCCGAATAACAGAATGTGCCATCACTGCGGGAAAGGGTTTCCGacaaaAGTACAATTGGAGTCCCATATTCGCACGCACACCGGAGAGAGGCCCTTCATGTGCGAGTTCTGTCCTACGACATTCTCGCAGCAGTCCAACTTGTATAAACATCACAGGCAGgtccatttaaacataaagtccaaacgttatttatgtaagaagCGTAAACTCGACGGGAATCAAACCGGTGACCCGTTCACGCTCCCCATCATGCAGTATTTACCTGAAAACGGTTTTAGTTTATGA
- Protein Sequence
- MENKDDIVNNLLCMACLCVGRSIYEVKEEKLKKYYLDILKEIPLNNIKVVVPIVCWECETILQKVLAFREQVKDSFRILQTYTENLTECLLSDVSRTPRLKVHINTPISILPDNLNEIKQENNDKDESENQNDCISDGEPNEDIQTVMCDVKRYKRKKKSVHKIKKVLNKVRQDEKDPVDTTETEINIKDIKMKDKNEPLNETNHTREDLGNNEPNNQNITKNIDMKMEINNEEEIDDIKSELDDKDDNLEDSASESEMKDIDKEIQSFLDNVKKNTDKSKKNKKKCHTETKNKIISIDLSYEEMQAERSKLSDTESFVTAKYKCESCLIVFTTELSKKSHDNKKHMVKGDFICSICKTIISSVEAFTTHYKRHMRRYECSTCGKRTPDLKTIQQHIYTKHNIDKTLKKYQCNVCGKISNSLDTHRYHRDTHKARVECSQCDKTFSHRAGLMNHRLAVHESQNEFPCTVCNKVFRWKTSLKRHLEKHDNENKGTNTSNRAFCISCGIGFSSVCSFQRHLRNSLKHVTHDQLKFICDHCNQRFADKTKLRDHIEEKHLHRTFQCPICNKPSKNRVGLEQHIRAVHKGRPNNRMCHHCGKGFPTKVQLESHIRTHTGERPFMCEFCPTTFSQQSNLYKHHRQVHLNIKSKRYLCKKRKLDGNQTGDPFTLPIMQYLPENGFSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00776197;
- 90% Identity
- iTF_01182099;
- 80% Identity
- -