Hcon000853.1
Basic Information
- Insect
- Heliconius congener
- Gene Symbol
- zfy1
- Assembly
- GCA_018230605.1
- Location
- DWAO01000289.1:18014-28210[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.015 1.6 10.3 0.7 1 23 324 347 324 347 0.97 2 11 0.12 13 7.4 0.7 1 23 353 375 353 375 0.97 3 11 0.00042 0.046 15.2 0.6 1 23 379 402 379 402 0.97 4 11 0.062 6.9 8.4 2.5 1 23 411 433 411 433 0.95 5 11 3.9e-05 0.0043 18.4 0.6 2 23 438 460 437 460 0.93 6 11 4.4e-05 0.0048 18.3 1.3 1 23 466 488 466 488 0.97 7 11 0.72 80 5.0 1.1 6 21 506 521 503 526 0.92 8 11 0.00013 0.015 16.7 1.7 1 23 534 557 534 557 0.94 9 11 1.5e-05 0.0017 19.7 0.1 1 23 562 585 562 585 0.97 10 11 6.7e-07 7.5e-05 24.0 2.9 3 23 594 614 593 614 0.98 11 11 2.4e-05 0.0027 19.1 2.4 1 21 620 640 620 641 0.95
Sequence Information
- Coding Sequence
- atggaaaataaagagGATATTGTGAACAATCTTTTATGTATGGCTTGTTTGTGTGTTGGTCGATCCATTCTCGAAGTAAGAGATGAAAAATCGAAGAAATACTACTTGGACATCTTAAATGAAATTCCTcTAAATGACATAAAACTGGTGGTACCTATTATATGTTGGGAGTGCGAAGCAATTCTGCATAAAGTATTAGCTTTTAGAGAACAAGTGAAAGATTCCTATAGgatattacaaacatatacTGAGAATTTAAATGAGTGCTTGTTAAGTGATGTATCAAGGAGCCCTAGATTGAAAGTGCATACAAATAAACCAATATCTATAATAGctgataatttaaatcatataaaatttgaaaaaaatgataataataaatcagcaaatctaaataatagtaatgctGATTTATCAGATGGTGAACCAAACGAAGACATACAAACAGTTATATGTGATGTTAAAAGatacaaaagaaagaaaaagagtaTACATAAAATGAGGAAAATTTCTCGACAAGACAAAGATCCAGTTGatataacaaatgaaaaagGAAACTTGCGAAATATCAAAATAGAAGAGAAAACTTTAGAAAACATGTTGAATCAAACAAACGATTCAAGAAtagatttaagaaaaaaagatgaGATTATTCTTAATCAAACGAATACGGATATGAAAATTGAGTTAAATAACGCAGCTATAGAAATGGATGATATTAAATCTGAATGTGATGAtaaagaagataATTTAGACAATTCTGCTTCCGAATCGGATATAAGAGATATAGATACGGAAATACAATCTTTTTTGGATAATGTAAAGAATACAGATAAAAGTAGAAGTAAAAGTAAGAAGAAATGTCATAcggaaacgaaaacaaaaaatataacaatagatCTCTCCTACGAGGAAATGCAAGCGGAGAGAACGAAAATGTCGGAAaaagtcaattttttaaatgccaaatataaatgtgaaagttgtTTAATTGTGTTCAATACTGAAGTGTCCATGAAAGCTCATAGGAGCAAGAAACATGAGgTGAAAGGCGATTTTATATGTTCaatatgtaaaacaattaTGTCATCGGTAGAAGCTTTCACAACGCATTACAAAAGACATATGAGAAgGTATGAATGTTCTGTTTGTGGAAAAAGAACCCCTGACCTGAAGACAATACAGCAACATATGTACACGAAACACAATAACgataaaacattaaagaaatatcaGTGTAATGTATGCGGGAAAATATCTAAGTCGCTGGACACTCACCGCTACCACCGCGACACTCACCGGGCGCGCGTGGAGTGTTCGCAGTGCGACAAGACCTTCAGCCACAGAGCTGGACTTATGAATCATAGattaGCAGTACACGAGTCCCAAAATGAATTTCCTTGTACAGTGTGCAACAAAGTGTTCAGGTGGAAGACTAGTTTGAAACGACATTTAGAAAAACATGACAACGAGAGTAAAGGCACAAATTCAACTAACAGAGCGTTTTGTATATCCTGCGGCATTGGATTTTCGTCTGTATGTTCGTATCAACGACATCTAAGGAACAGCTTGAAACATGTCACTCATGATCAGTTGAAattcATCTGCGACCACTGCAACCAACGGTTCGCAGATAAAACGAAGCTACGCGACCATATAGAGGAGAAACATTTACACAGGACTTTCCAATGTCCCATATGtaataagccgTCCAAAAACCGTGTGGGACTAGAACAGCACATACGCGCAGTGCACAAAGGGAGGCCGAACAACAGAATGTGTCATCACTGCGGGAAGGGATTTCCGacTAAAGTCCAGCTCGAGTCGCACATACGCACGCACACCGGCGAGCGGCCCTTCATGTGCGAGTTCTGCCCCACTACGTTCTCGCAACAGTCCAACCTGTACAAGCATCATAGGCAggtgagtgagtga
- Protein Sequence
- MENKEDIVNNLLCMACLCVGRSILEVRDEKSKKYYLDILNEIPLNDIKLVVPIICWECEAILHKVLAFREQVKDSYRILQTYTENLNECLLSDVSRSPRLKVHTNKPISIIADNLNHIKFEKNDNNKSANLNNSNADLSDGEPNEDIQTVICDVKRYKRKKKSIHKMRKISRQDKDPVDITNEKGNLRNIKIEEKTLENMLNQTNDSRIDLRKKDEIILNQTNTDMKIELNNAAIEMDDIKSECDDKEDNLDNSASESDIRDIDTEIQSFLDNVKNTDKSRSKSKKKCHTETKTKNITIDLSYEEMQAERTKMSEKVNFLNAKYKCESCLIVFNTEVSMKAHRSKKHEVKGDFICSICKTIMSSVEAFTTHYKRHMRRYECSVCGKRTPDLKTIQQHMYTKHNNDKTLKKYQCNVCGKISKSLDTHRYHRDTHRARVECSQCDKTFSHRAGLMNHRLAVHESQNEFPCTVCNKVFRWKTSLKRHLEKHDNESKGTNSTNRAFCISCGIGFSSVCSYQRHLRNSLKHVTHDQLKFICDHCNQRFADKTKLRDHIEEKHLHRTFQCPICNKPSKNRVGLEQHIRAVHKGRPNNRMCHHCGKGFPTKVQLESHIRTHTGERPFMCEFCPTTFSQQSNLYKHHRQVSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00782856; iTF_00780451; iTF_00782055; iTF_00458281; iTF_00781291; iTF_00621452; iTF_00778256; iTF_00775469; iTF_00779690; iTF_00457427; iTF_01182099; iTF_01182096; iTF_00774681;
- 90% Identity
- iTF_00780451;
- 80% Identity
- -