Pcor037868.1
Basic Information
- Insect
- Pherbina coryleti
- Gene Symbol
- dmd-4
- Assembly
- GCA_943735905.1
- Location
- CALSEP010002934.1:206413-215430[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-25 2.1e-21 76.7 9.5 1 47 46 92 46 92 0.98 2 2 0.43 4.5e+03 -1.2 0.2 23 31 292 300 284 304 0.78
Sequence Information
- Coding Sequence
- ATGGATTTGAATCAGCATCAACAATTGCAACAGCCCGTAAGCATCCGTGATGAGAAGAAAACCTTGAAGAAGTCGCGAAATCATTTAAATAAAATAAATAAAACTGTGGATTTAACAAATAACGGCACTACGAATCGTGTGCCAAAGTGTGCCAGATGCCGTAATCATGGAATTATATCGGAATTACGCGGTCATAAAAAATTGTGCACCTATAAAAGTTGCAAGTGTGCCAAGTGTGTGCTGATCTACGAGCGGCAGCGTATCATGGCAGCTCAGGTGGCTTTGAAACGGCAACAGGCAGTGGAGGATGCGATTGCCTTGAGACTTGTGTCGACCAAGACAGGCAAGCAAATTGATGCATTGCCGCCGGGCAATATTTTTGGTCTAACAGTTACGGAACCCATCATCAACAGCAGACCACAAACATCACCGCCACATTTGTTGAAAACAATGGCCGAAGATCTAAGCACCACAACTCAGCAGCAGCAGCAGCAGCAGCAACAACAACAAGACACAAAGGCTCAATTTGCTGTCGCAACAAATTCCAGTGCACCATCTGCAGCAGCAGCAGTTTCCCAAACGGCCATTGATATGCTGGCTCAACTTTTCCCACATCGTAAGCGTTCCGTTCTAGAATTGGTTCTTAAACGTTGTGATTTAGACTTGATACGCGCCATTGAAAATATTTCACCAACCAGACCGGAACAGGAAACGCGCAGCGCCTTTAAGCCCTTTGCAAAAACATCTTTTGAGCACAAATCCGAATACATGGCGCCACAGCAAGTTGTACCACCTCCAATTTGCGCCTATCCCAAATGGATTGTGCCACTTTCGTTTCCGGTCACTATGGGTCATCTTTCGAATTTAGCTCCACGTTGCACTCTACCGAATTGCGCCTGTCTGAGCAGCTATCAGTTCAACTGA
- Protein Sequence
- MDLNQHQQLQQPVSIRDEKKTLKKSRNHLNKINKTVDLTNNGTTNRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIYERQRIMAAQVALKRQQAVEDAIALRLVSTKTGKQIDALPPGNIFGLTVTEPIINSRPQTSPPHLLKTMAEDLSTTTQQQQQQQQQQQDTKAQFAVATNSSAPSAAAAVSQTAIDMLAQLFPHRKRSVLELVLKRCDLDLIRAIENISPTRPEQETRSAFKPFAKTSFEHKSEYMAPQQVVPPPICAYPKWIVPLSFPVTMGHLSNLAPRCTLPNCACLSSYQFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01415040;
- 90% Identity
- iTF_01415040;
- 80% Identity
- -