Pcor003431.1
Basic Information
- Insect
- Pherbina coryleti
- Gene Symbol
- -
- Assembly
- GCA_943735905.1
- Location
- CALSEP010000090.1:304690-328648[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.3e-07 0.0054 18.1 0.5 19 43 85 109 82 112 0.93 2 4 0.0007 6 8.3 0.2 24 43 114 133 110 136 0.89 3 4 0.0014 12 7.3 0.5 24 44 138 158 135 172 0.88 4 4 2.2 1.9e+04 -2.9 0.0 24 34 269 279 266 280 0.86
Sequence Information
- Coding Sequence
- ATGGGGTTTGGTAAAGCTATGCGCTTAAAGCCGGGCGCAGTCCCAACAGTTGTGAGCAAAGAGGCGCTTCCAGCAAATGCTGAACGATGTCAGCGAATTTTAAAACGCGAAAACAAAAAAATTGTTAGCGCTTTGCTTCAGGAGTCGATGGTCATTGAGGAAGTGCAGCGGCGTGAAGAAGTTTTTCCTTTACAGGAAATACAAAAAGAAAATATGGTCGCATCTGTTCCTAGCACGTCTTCAGAGCAGTTTCTTAAGGCGAAAATAAAGCAGCTAGAGTCGCATGTTGAAGAGCTGAAAAGAGAAAATTCTTCATTACGTCAAGGTGCCATAAATCTAAAGCAGCTGGAGTCGCAAGTTGAAGACCTGAAAAGAGAAAATTCTTCATTACGTCAAGGTGCCATAAATCTAAAGCAGCTAGAGTCGCAAGTTGAAGAGCTGAAAAGAGAAAATTTTTCATTGCGTCAAGCAGCCATAAATCATGGCAAAGAAATGCGTGCACTGCAACAACGCGCTGAGAAAGCAGAATTTGAAGGAAAACTCACTgaagacaaacttctcaccatattcactcctgGCTCCATCTTAAAGGGTTTCCCAGAAACTGTGGAGGACAAGGAATGGAACGAAGGAAACAATGATGCCGAATTGGATGAATTGGAATACGACGGTTTGGAAAACCTCGCGGGATACATCTGCCATCAGTTGCACAAAGACGTTCCAAACATAAGGGTGGAAGAAACAGCGGTAGCATCACTTAGTTGGGTAGATCATCTAAGCGAGGGCGGCTTGTCGAAGCCAACGGAAGAGCTCATGGCGCATATGAAGGCGTTGGAAAAAGTATTCGTGGAGCTAAATGGCGAAGGGCTGCTGATAACCAAAAATTATTTGAAGACGCACATTGCAAGCGCAGAGCATGTTGGAGCACCTGAAGTCGGTGTATTGTTAGCTGGAAAAGTTGCGCTAGTCGATGACGTTATTACAATCGTAGCTAGTGATGACAATGAGTGTGAAGAAGACGATGATGACGATGTTTATGACGAAAAGGATACGTTATCCTTCGACACCTTCAACAAGAAGGACAAGCCACATCGATCAACATCTTCAAGGGTGCCACAAGGACACGCCACAGTGACCGACACATTCAAGGGTGCCACAAGGACACGCTACAGCGATCGCCGCAATCAAGGGTGCCACAAGGACACGCTACAGCGACCGCCGCATTCAAGGGTGCCACAAGGACACGCCACAGCGACCGCCGCAATCAAAGGTGCCACAAGGACACGCCACATCGACCGCCGCATTCAAGGGTGCCACAAGGAGACGCCACATCGACCGCCGCATTCAAGGGTGCCACAAGGACACGCCACAGCGACCGCCGCAATCAAAAGTGCCACAAGGACACGCCACAGCGATCGTCGCAATCAGAAGTACGACTAA
- Protein Sequence
- MGFGKAMRLKPGAVPTVVSKEALPANAERCQRILKRENKKIVSALLQESMVIEEVQRREEVFPLQEIQKENMVASVPSTSSEQFLKAKIKQLESHVEELKRENSSLRQGAINLKQLESQVEDLKRENSSLRQGAINLKQLESQVEELKRENFSLRQAAINHGKEMRALQQRAEKAEFEGKLTEDKLLTIFTPGSILKGFPETVEDKEWNEGNNDAELDELEYDGLENLAGYICHQLHKDVPNIRVEETAVASLSWVDHLSEGGLSKPTEELMAHMKALEKVFVELNGEGLLITKNYLKTHIASAEHVGAPEVGVLLAGKVALVDDVITIVASDDNECEEDDDDDVYDEKDTLSFDTFNKKDKPHRSTSSRVPQGHATVTDTFKGATRTRYSDRRNQGCHKDTLQRPPHSRVPQGHATATAAIKGATRTRHIDRRIQGCHKETPHRPPHSRVPQGHATATAAIKSATRTRHSDRRNQKYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -