Pcor015293.1
Basic Information
- Insect
- Pherbina coryleti
- Gene Symbol
- -
- Assembly
- GCA_943735905.1
- Location
- CALSEP010000483.1:224595-240113[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-07 0.0033 18.8 0.5 19 43 79 103 76 106 0.92 2 4 0.00022 1.9 9.9 0.4 24 43 108 127 105 130 0.89 3 4 0.00061 5.2 8.5 0.5 24 44 132 152 128 167 0.89 4 4 1.2 1e+04 -2.1 0.0 24 34 263 273 258 274 0.84
Sequence Information
- Coding Sequence
- ATGCGCTTAAAGCCGGGCGCAGTCCCAACAGTTGTGAGCAAAGAGGCGCTTCCAGCAAATGCTGAACGATGTCAGCGAATTTTAAAACGAGAAAACAAAAAAATTGTTAGCGCTTTGCTTCAGGAGTCGATGGTCATGGAGGAAGTGCAGCGGCGTGAAGAAGTTTTTCCTTTACAGGAAATACAAAAAGAAAATATGGTTGCATCTGTTCCTAGCACGTCTTCAGAGCAGTTTCTTAAGGCGAAAATAAAGCAGCTAGAGTCGCATGTTGAAGAGCTGAAAAGAGAAAATTCTTCATTACGTCAAGGTGCCATAAATCTAAAGCAGCTGGAGTCGCAAGTTGAAGAGCTGAAAAGAGAAAATTCTTCATTACGTCAAGGTGCCATAAATCTAAAGCAGCTGGAGTCGCAAGTTGAAGAGCTGAAAAGAGAAAATTTTTCATTGCGTCAAACAGCCATAAATCATGGCAAAGAAATGCGTGCACTGCAACAACGCGCTGAGAAAGCAGAATTTGAAGGAAAACTCACTgaatacaaacttctcaccatattcactcctgGCTCCATCTTAAAGGGTTTCCCAGAAACTGTGGAGGACAAGGAATGGAACGAAGGAAACAATGATGCCGAATTGGATGAATTGGAATACGACGGTTTGGAAAACCTCGCGGGATACATCTGCCATCAGTTGCACAAAGACGTTCCAAATATAAGGGTGGAAGAAACAGCGGCAGCATCACTTAGTTGGGTAGATCATCTAAGCGAGGGCGGCTTGTCGAAGCCAACGGAAGAGCTCATGGCGCATATGAAGGCGTTGGAAAAAGTATTCGTGGAGCTAAATGGCGAAGGGCTGCTGATAACCAAAAATTATTTGAAGACGCACATTGCAAGCGCAGAGCATGTTGTGATATGGCAACGCCTGCGCATGTTGTACAATTCGCATCTTAAGATGTGTACACATTCCGAATAG
- Protein Sequence
- MRLKPGAVPTVVSKEALPANAERCQRILKRENKKIVSALLQESMVMEEVQRREEVFPLQEIQKENMVASVPSTSSEQFLKAKIKQLESHVEELKRENSSLRQGAINLKQLESQVEELKRENSSLRQGAINLKQLESQVEELKRENFSLRQTAINHGKEMRALQQRAEKAEFEGKLTEYKLLTIFTPGSILKGFPETVEDKEWNEGNNDAELDELEYDGLENLAGYICHQLHKDVPNIRVEETAAASLSWVDHLSEGGLSKPTEELMAHMKALEKVFVELNGEGLLITKNYLKTHIASAEHVVIWQRLRMLYNSHLKMCTHSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01180911;
- 90% Identity
- iTF_01180911;
- 80% Identity
- iTF_01180911;