Basic Information

Insect: Pheosia gnoma
Gene Symbol: -
Assembly: GCA_905404115.1
Location: FR989924.1:2061118-2070075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.3e-06 0.00013 22.2 5.9 1 23 310 332 310 333 0.96

2 18 0.00012 0.0069 16.8 6.0 1 23 339 361 339 361 0.96

3 18 2.2e-06 0.00013 22.3 1.3 1 23 367 389 367 389 0.98

4 18 2.5e-06 0.00014 22.1 0.2 1 23 395 417 395 417 0.97

5 18 6.5e-07 3.7e-05 24.0 1.1 2 23 424 445 423 445 0.97

6 18 9.8e-06 0.00056 20.3 0.5 1 23 451 473 451 473 0.99

7 18 0.22 13 6.5 0.2 1 11 479 489 479 492 0.91

8 18 7.9e-07 4.5e-05 23.7 0.7 1 23 594 616 594 616 0.98

9 18 0.076 4.4 8.0 6.7 1 23 622 645 622 646 0.96

10 18 8.4e-06 0.00048 20.5 2.8 1 23 652 674 652 674 0.98

11 18 4.2e-05 0.0024 18.3 0.6 1 23 680 703 680 703 0.98

12 18 3.1e-06 0.00018 21.8 2.1 1 23 709 731 709 731 0.98

13 18 5e-07 2.9e-05 24.3 1.0 1 23 737 759 737 759 0.98

14 18 0.00012 0.0071 16.8 0.3 1 23 765 787 765 787 0.95

15 18 3.8e-06 0.00022 21.6 0.6 1 23 793 815 793 815 0.99

16 18 1.2e-07 7e-06 26.2 0.5 1 23 821 843 821 843 0.99

17 18 2.7e-07 1.5e-05 25.2 2.2 1 23 849 871 849 871 0.99

18 18 3.5e-07 2e-05 24.8 0.4 1 23 877 899 877 899 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.3e-06	0.00013	22.2	5.9	1	23	310	332	310	333	0.96
2	18	0.00012	0.0069	16.8	6.0	1	23	339	361	339	361	0.96
3	18	2.2e-06	0.00013	22.3	1.3	1	23	367	389	367	389	0.98
4	18	2.5e-06	0.00014	22.1	0.2	1	23	395	417	395	417	0.97
5	18	6.5e-07	3.7e-05	24.0	1.1	2	23	424	445	423	445	0.97
6	18	9.8e-06	0.00056	20.3	0.5	1	23	451	473	451	473	0.99
7	18	0.22	13	6.5	0.2	1	11	479	489	479	492	0.91
8	18	7.9e-07	4.5e-05	23.7	0.7	1	23	594	616	594	616	0.98
9	18	0.076	4.4	8.0	6.7	1	23	622	645	622	646	0.96
10	18	8.4e-06	0.00048	20.5	2.8	1	23	652	674	652	674	0.98
11	18	4.2e-05	0.0024	18.3	0.6	1	23	680	703	680	703	0.98
12	18	3.1e-06	0.00018	21.8	2.1	1	23	709	731	709	731	0.98
13	18	5e-07	2.9e-05	24.3	1.0	1	23	737	759	737	759	0.98
14	18	0.00012	0.0071	16.8	0.3	1	23	765	787	765	787	0.95
15	18	3.8e-06	0.00022	21.6	0.6	1	23	793	815	793	815	0.99
16	18	1.2e-07	7e-06	26.2	0.5	1	23	821	843	821	843	0.99
17	18	2.7e-07	1.5e-05	25.2	2.2	1	23	849	871	849	871	0.99
18	18	3.5e-07	2e-05	24.8	0.4	1	23	877	899	877	899	0.99

Sequence Information

Coding Sequence: ATGGAAAGCCTAGGTATTTGTCGTATTTGTTTAAATAAGGATGTTCAGCACGTAGTAAAGAGTCCGCAGCTGCAAGATATTTATGAAAAACTGACAACAATACCGTTTCAGGCTGACGAGAGACCACTGGCATTATGCTACATATGTTTTGCACAACTGAAAACCTCGCACAGATTCATGCTCAAGTGTCTGAAGGCTGAAGAGCTCCTTGCACAGATGCTGTCCAATGAGGATGGGGTACTAGATCCAACCCGGATTGACCGATCAGCTCTCGACCAAATGTCTTTTAGCTCATTAGAACACACAATTATTACCGACAGCGCTCTACAGGATGTTGACGAAGGCGAAGTACTGAATATTTATGAGAGGGATGTTAAATTGGAGGGTCACAATTCTCAAGATCGCCCAGAGTTAATTGATAGTACCGATTCAGAACCTGACATTGAACAGACTCCCTCGGATCCTGGAGACGACATCCCGTTGTGTACTATAAAGAAGGAGTTGGAAACAGTAATGGAACTGGAGGAAGAGGAAGCGGAGGACGTGGAGGTGGAGGAAGCGCTGAACTGCAAGAGAAAGAGTCACCGAAACGCATTAAAGAGAGCAATACCTATTGCAAAGAAGTCCAAACTTAAACCCGAAGGGAACAGAACTCAAGACGTAAAAATCGTTAACATCGATCCTGTCACCGTTAAACCCGAAGCAAGTAAATCTAAGCGTTACGTAGACGTTAAAAATCCACTTAAAAACAACATCAGTTCCAACAGAAAATATTCTTTTGAAACACATAATAAGGATCAACAAAAAGAAATTGTTAAAAATAATTTGGCTAAAAATGTAGACGTTGAAATTGATTGCGTGAAACGAGATCGCAAAAAGATTGATACGATTAAACATGCACATATAAACACAGACGCGGGAAAGCCGTACATGTGTGATTTGTGTAACAGATGTTTCACAAAAAAAGACAATTTAAAAACTCACATACGCATCCACCATACATACGACAAGCGCCACGCGTGCAATTACTGCAAAAAAAGATTCACATTCAAAAGTCAATTGGTATATCACACACGCAAACACACGGGTGAGAAACCGTTTGTGTGTCATGTGTGCGAGAAGAGTTTCACCGAAAAGGGCGCTCTTAAATCCCATGCACGCACACACACCGGGGCAAAAGCTTACGTTTGCAAAGTTTGCGAAAAGGTGTTCACCACAAAGGAATCCTTGGCAAAGCATGCGTCCATACACGTCGGGGAAAAGGCCTCCGTTTGCCATGTGTGCGGTAAGACATTTAAATTAAAAGGTAACCTCATAAAACACGTTCGTATACACACAGGTGAGAAGCCGTATGTGTGTAATGTGTGTGGCAAAGGTTTCACCGTGAAGGATAGGTTAAATTTACACTCACGTACACATACAGGAGAAAAACCGTACGTATGCAATGTGTGCAACAAGGGTTTCTCTATCAAGGCGGCTCCCATTGCAAACGAGCCCACACTTAAACCCGAAGTGATCCGACCAACACAAGACACGCGTAGAAACGTTAACACCGCTCCTGTCACCGTAAAAGCTGAGGCAAGCCAATGTAAACGCAATATGGACCTTAAAACCCCGGGTCTTAAAGACAAGAACAAAATTAACAGAACATATTATATTATAAAATATAATGCGTGCGTCAAAAAAGTTGTTAACACTAGCAATGTGAATTTAAATAAAGATAGTCCAAGGGATATGTGTACAAAAAGATTCAGTAAAAAGAGTGATTCAACAAAATCATATGTGTGTGATGTGTGCAACAAGGGTTTCACACAAAAAGTTAATCTAAGAATACACACACGACAACACACCGGCGAGAAACCGTATGTGTGTCATGTGTGCAAAGCGAGTTTCACTTGCAAACGCAATCTGTCCAATCATCTAACTCGTATACACCACGTCGGTAAAGCGTCATATGTTTGCGATGTTTGTGAGAAAGGATTCACACATCAGTGCCAATTAAGAATACATCTGCGCATTCACACAGGTGAGAAACCGTTTGTGTGCACGGTGTGTGCCAAAGGTTTCACTGAGAACCAAAAGCTAACGAAACACATTCGACGGATACACACAGAAGAGAAGCCGTTTGTTTGTCAGATTTGTCAGAAGGGGTTTATTGAGAAGGCGCATTTAAAAACACACCAGCGCACACACACGGGGGAAAGACCTTTTGTTTGCCACGTCTGCGGGAAGAGTTTCAGTGTGAAAGATGCACTAATACAACACAATCGTACACACACTGGTGAGAAACCTTTCGTGTGTATCGAGTGCGATAGGGGTTTCACACAAAAGAGTGCATTGCTGAAGCACTCGCGTATTCACACGGGTGAGAAGCCGTATGTTTGTAATGTGTGTAAGAAAGCCTTCACAGCGAGGAGTAGTTTAATTTTACACACGCGTACACACACAGGTGAGAAGCCGTATGTGTGCAATGTGTGCGATAAAGGTTTTAATGACAAGTATAAGTTGAATGTGCACATGCGAATACACACTGGTGAGAAACCATATGTGTGTAATGTTTGTGGCAAAAAATGCACTGATAAGAGTGCTCTAATCAAACACACTCGTACACACACCGGGGAGAAACCGTATGTGTGTAATGTGTGTGAGAAGGGTTTCACTCAAAAGAGTGCGTTAAACACACACGCACGTACACACACAACACACAATATTGAGACACAAAACTTTAAGATCATTCCGTAA
Protein Sequence: MESLGICRICLNKDVQHVVKSPQLQDIYEKLTTIPFQADERPLALCYICFAQLKTSHRFMLKCLKAEELLAQMLSNEDGVLDPTRIDRSALDQMSFSSLEHTIITDSALQDVDEGEVLNIYERDVKLEGHNSQDRPELIDSTDSEPDIEQTPSDPGDDIPLCTIKKELETVMELEEEEAEDVEVEEALNCKRKSHRNALKRAIPIAKKSKLKPEGNRTQDVKIVNIDPVTVKPEASKSKRYVDVKNPLKNNISSNRKYSFETHNKDQQKEIVKNNLAKNVDVEIDCVKRDRKKIDTIKHAHINTDAGKPYMCDLCNRCFTKKDNLKTHIRIHHTYDKRHACNYCKKRFTFKSQLVYHTRKHTGEKPFVCHVCEKSFTEKGALKSHARTHTGAKAYVCKVCEKVFTTKESLAKHASIHVGEKASVCHVCGKTFKLKGNLIKHVRIHTGEKPYVCNVCGKGFTVKDRLNLHSRTHTGEKPYVCNVCNKGFSIKAAPIANEPTLKPEVIRPTQDTRRNVNTAPVTVKAEASQCKRNMDLKTPGLKDKNKINRTYYIIKYNACVKKVVNTSNVNLNKDSPRDMCTKRFSKKSDSTKSYVCDVCNKGFTQKVNLRIHTRQHTGEKPYVCHVCKASFTCKRNLSNHLTRIHHVGKASYVCDVCEKGFTHQCQLRIHLRIHTGEKPFVCTVCAKGFTENQKLTKHIRRIHTEEKPFVCQICQKGFIEKAHLKTHQRTHTGERPFVCHVCGKSFSVKDALIQHNRTHTGEKPFVCIECDRGFTQKSALLKHSRIHTGEKPYVCNVCKKAFTARSSLILHTRTHTGEKPYVCNVCDKGFNDKYKLNVHMRIHTGEKPYVCNVCGKKCTDKSALIKHTRTHTGEKPYVCNVCEKGFTQKSALNTHARTHTTHNIETQNFKIIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01180481;
90% Identity: -
80% Identity: -