Pari023378.2
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751442.1:2121573-2131490[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.02 2.5 10.0 0.6 3 23 742 763 741 763 0.90 2 23 0.049 6.1 8.7 0.6 1 22 1131 1152 1131 1152 0.95 3 23 7.4 9.3e+02 1.9 0.3 1 22 1194 1215 1194 1217 0.82 4 23 0.062 7.8 8.4 0.8 3 21 1228 1246 1226 1247 0.94 5 23 0.48 60 5.6 0.0 3 23 1256 1277 1254 1277 0.89 6 23 0.019 2.4 10.0 0.2 3 23 1297 1318 1295 1318 0.96 7 23 0.0049 0.61 11.9 3.0 1 23 1324 1347 1324 1347 0.95 8 23 0.14 17 7.3 0.0 1 23 1372 1395 1372 1395 0.90 9 23 0.021 2.6 9.9 3.4 1 23 1400 1422 1400 1422 0.97 10 23 0.013 1.7 10.5 0.2 1 23 1428 1451 1428 1451 0.95 11 23 0.0005 0.063 15.0 0.8 1 23 1465 1487 1465 1487 0.98 12 23 0.00019 0.025 16.3 1.8 1 23 1534 1557 1534 1557 0.97 13 23 0.0025 0.31 12.8 1.0 1 23 1628 1651 1628 1651 0.95 14 23 0.0022 0.28 12.9 1.5 2 23 1678 1700 1677 1700 0.95 15 23 0.1 13 7.7 0.2 2 23 1706 1728 1705 1728 0.93 16 23 0.011 1.4 10.8 0.2 1 21 1770 1790 1770 1791 0.95 17 23 0.0021 0.26 13.0 0.2 1 23 1801 1823 1801 1823 0.93 18 23 9.7e-05 0.012 17.2 0.3 2 23 1917 1939 1917 1939 0.93 19 23 7.2e-07 9e-05 23.9 1.0 3 23 1946 1966 1945 1966 0.98 20 23 0.013 1.6 10.6 0.2 1 23 1983 2005 1983 2005 0.97 21 23 0.21 26 6.7 0.0 1 23 2026 2048 2026 2048 0.97 22 23 0.012 1.5 10.7 0.5 1 23 2054 2077 2054 2077 0.95 23 23 0.00034 0.043 15.5 0.7 1 23 2085 2108 2085 2108 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGGATTATGATAGTGTTTGTAGACTATGCTTAGCATCTGAACGCGATTTAGTGCCGATATTTCCTACCACCAGTTCGGATGACTCTGAACCTCTCGTCCTCGCTTTGAAAATCAAAGATTGCGTTTCCATACAGATTGAGGAGAATGACAATCTACCAAGTAATATTTGCAAGAAATGCAATGACAATGTTATCAATTGGGATATATTCAAGGGAGTTTGTGAAAGAACacaaaataaactattaaatttgaACAAAAAGGGCACCCACCAACTGGAAGAGTTGAATGTGAAAAGAGAGCCATATGCAGATGAAGCCTATGATGATGGAGTGGTATTAGACGGCTCATACCCCGAGAGTGAGAGTGCGGAGGGACCAAATAAACTACAACCGGAGGGCCCACCTATTTTGACTTCTTTGGGACTGACACCGAGGAGTGATAAGAAATATGTAGATCCCAGAATGGACTGGCAACGTGTCCATGCAATATTGGACATTGTTCAAGAAGATGAGGTCATTGACTCTTTACAAGTGAGAGAGGAGTGTGATATTGTCCATGAATCAGAACATGACTCTGATACTGACATAGAACTCAACGAGGACATAAAGCAGGAGTATCTAGAATTCAAAAGAGGATATGTGTGCAGAAATAAGAAGTCACTGTCAAAGAATCCCAAGCTGTTATCCTCACAAACCATAGCTAAAGCTAGAAAAGTTGTCAGTTTGAGGAAGAAACAGACTGTACTGCCACACAAATATTATGCTCGGCCTCGGAATACGTGGCAGCTATTCATTTCAGATGACCTTTTGGAGCTTATTGTGGCTGCGACAAATGCAAAAATGGAAATGAGTGAGGCGAGGTACTTTCCAACAAAGATCCGTGAAATAAAAACACTTATCGGTATATTGTACTATCATGGTATAACCAGAGCAACACACCAAAAATGTTATGACCTTTGGAGTCACGAGTTTGGTGCTCCGTGTGTGCAAGCAGCCATGAAGTATGAGCGGTTTAAGACTCTGCTCCAAAACCTGAGCTtcgaaaataatgaaaatgaagCTATCATGGAGCTAGATATAATGAAACAATTTCGTCAAGTGTTTGAAATATTTGCGTTAAATTGCAGAACTTCATTTGCAGTTGGTAATACTGTTGTGATTGACGAAGTTATGGTCCCAGTTTACGGACCATGCCCATTCCGATACCAAATCAAAAAGAAGAAGTTGAAGTCTGGTATCAAAATGGTGTTAGTTGTGGATCCTAATAACTTTTATGTATCCAACTTGGATGTGATAACAGATCCTTATTTTGGCAGTGACGACATTGCTATGAAGCTGTTGCAGCATTTAGCTGGCACTTACAAGACTGTTGTAATGGACAGCTGGTTTTCATCATCTACCTTAGTGAATAAATTGCTGAATGAATACAAACTGTTCTCACTAGCTGCTATAAATGAAAGAAACGAGCTACTGCCCCCTCTATTTGTATCACATCACAGAAAAAATAGAGTTCTTCTAAATGGATTCCTAGATGAAGATGTACTTCTAATGTCCCTTATTGATTCAAACCAGAAGACGGTCAATATATTAACTAACGAAccaaaacattataaaaaaagcAATGTCAATTCTATAACTCCTATTTCATTGTACAAGAAACACCAATCGGCCGTTGAAGTTATTGATGTCCTTATGCATTATTATACAACAATGCAGCACACAAATGACTGGACCCtgtctatattttttatgcTACTCAACATTGCTTCAGCGAATGCTCAAGTTATGTGGACTTCTCAATCACCGAATACGAGTATGAAACGTCGCTTCTTCATAAGAGAGTTAGCGCTGAGTCTGATGGATGCACAATATGAACCTATACTTACGGAATTAAATCTTAGTTCCAAGAAGAGGAAGATGAGTATGGAGCATTTGTCCCCATCATATAAGAACAGAAGACGCTGCAAGCCCTGCCATGCATTGTTCAAACGAGACAGACGAACGAAGACTTATTGTggaGTGGATAGTGATAAGGAAGATTATGAGGAAGGCGACGACCAAGAGGAGGTTGCTGAAGAAGACGAGGAGGAGGAGGTGAAGGAGCAGAAAGTGTTCTCCGACATACCCAACATGCCTGAAGTATCCATAACCGTTATGCGACCCACGGGAGAGACGCTACACGCTAGACAGGGCATCCAACAACTAGCCTCCAAAGACTGCCTTGTTTGCGGCCGAAGCTACAGGTACTCGCATAACGCCCGGCGACACGAACTAGGCGCGCATAACTTCGATAGATACACAAATAACCACCTGGCAAAGAAATCAATCATGCAACCAAAGTTACGACCCAACCCCTTTAACCCCAAAGCGAGGCTCATGCCTAACCCCATCAGCCATAAAATGCAGTACATGAACATGGCTAAGCCGCTGCAGAAGAAAATTATGCCCCAAAAAATGGTCGCCTGCCCGAAACCGATTCCAATAAAGAATACCAAATCGAACCAAATGACTTTGCCATACCCGTTGCGAATTAAAGCTCTTAAGGATTTACAAATAAAGAAAAAGGAACCTCAAATACTGAAGACTCTTTTGACGTCGAAACCCGAAGTTTTGGTTTCTGAACCGGAAATAATGAATTCCGGTCCGGAGAGTCCAGAGACCTTGATATCGGAACCGGAGATTGCGTCGTTTGCGGTCGAGACTATATTGTCCGAACCGGACGGAGACGCCAACCAACAGGACGAGGATGATGACGGCGAGGAACAAAACAAAAGAGGCCATAATTATGATACAGTAGACATGGATTCTGAAAACGAAATAGAAATAGCGCGACAACAGTCTGATGTGAATTACGACCAAGAACAGGAACAAAAAGAAGATGATCCGAAGGAAGATTTGAATGAAAATGATGATTCTGACAAAAATAGCGCAGGCGACAACGCCACCAGTGAGAATAAACATGAGACAGAAATTGAGGACCATGGTGAGAAAACAAACGAAGACTTGACAGAAAATAAAGATAAAGATGAACAAGACGCTAACGATGACGATGAAGACGACGAAGAAATGCCTCCCATAGCACCTGTCGTAGAAATCAACGAAGAAATTAACAACTCTTACCACAATGATGAGACAAACGATAACGAAGATGACTACCTCGATGACACTGTGGACCCTAATGACGCGGCAGACCTCGATAGTACTCCAAAAATACTCGACCCCGATAAGATCTACGTAACAAAAACACAAAGAGATTTTATAGTCAAATATCGTGACATAATTCAACAGATAAATACTATGACGTGTCTCTGTTGCAACAGAGAGCATCCCCGAAGAAAAGCAGTCATCCAGCATTTACAAAAGAACGGCCATAAAGTACCCAAGCACACCTGCTACAACTGCGTCGTCACATTCAGTCATATCGGTGCTTTGCTAAGTCACATGCGATCCAACTCCTGTACTGATTTGTGGAAAATTATATACAACGAAAACGGTATAACCGACGACTTGGTACTAGAGGATGAGCCCAAAGACAATAAAGTCGCGTACAAGGACATCTTCAACGCGAGGTCGTACGCCTGTAAACTGTGTCCGGCAAAATTCCAATTGAAGCAATTTATTATGAAACATGTCCTCGATGTCCACGAGGACGGCCAGTCGAGAGTACATTTGGCGTGCGTACACTGCAGGTCGAGGTTCAAGGACAAGGCGCTGTGGAAGAAACACATACGTAACGGCGAATGTACGGTTTATATAGCGTGCGACTTGTGCACGGAAACGTTTATAACCATGCAGGAGTTCAACGATCACGCGCTAGCCGTGCACGCGGGCCAATTCGACCCCGACAACCAGAACAAATGCGTCGATGGCCGCCCCACCGACTGTCCCCTGTGCGGAAAAAAGAACAGCAGCTACCCCAATCTGGTGAAGCACTTGAAAATCATACACAACGAGGAGCAGCCGCACTACTGCCAACACTGCGACTCCAAGTTCAAGGAGGCGGGAGATCTTAACAAACATATTTACATGGAGCACTCCGACCGCTCTATGGTACAGAACAACGAGCCCGATATGTCTGTGGTCAAGGAGGAGGCGGAGGAGTATCACTACTCCTGCACGGAGTGCAACGCGATATTCGAGACCGTGGACGCTTGGACAGACCATCAAGTTGCCGAGCACAATCAGATTGCGCACCACTGCGACCAGTGCGAGAAGAAGTTTCTCCGACCTTCCGAGTTGGCCGAGCACAAGAACACGCACCTGCGGGTTAAGTTCTACCCGTGCACGATATGCGCGAACTCCTACAGTACGGCGTCCAAGCTGTCTGAGCACGTGCAGCAGAGCCACCCCGGCAAAAACCACACGCCCGCCGGCGGGGAGAACGTGTTCTACTGCGAAGTGTGCGTGAGAGGTTTCAAGAGTCGCCAGGCCTACTCCAATCACATGCGCATACACTCCAAGCTCCCTCAGGTCAATAGAAAGGCGGATCAAAAGAGTTTCGCCCCGCAGATAATCGGAAAGCCGATTCTCCAGTATCCGCTGATGCAGCAGGGTTTCGGCTTCAAGTCGAACCTCAACGTTCCCAACGCGCCATATTCGTGCGACATCTGCGGCAAGGGCTTCATGCACAAGAAGAATATCTGGAAGCACAAGAAGGTGCTGCACGCCGATATCGTCAACGACCGCAACGACAGCGAGGAGAACACCATGCACGCGTCCACGGAGGAGGATGAATACAACGTGGACGAGAACGGCGCAGCGCTGTCCACGCCGCAGTTCAATAGCTTCAATTTTACTAGCATGCCCGCCGCCACCCCCGCACCGCAAGCCGCCCCGGTGCCGCCGCCGCCCAAGACGCCCCAGGAGGCCATGCAGTTCGCGTGCGACCTGTGCTCCAAGCGATTCCCTCTAAAAACTAGCCTATGGAAGCACAAGCGCGCGAAGCACGGTATCATTAACGCCGCGACCATCGGCACGGCCGACATCCAGCCCTCCGGCAGTGAGAGCGGCGCCGGCGGCCGGTCCAGTTGCACCATCTGCAAGATAACATTCGCCGACAAGAAGTCGTACTACCGGCACAGGAAAAACGTTCACAAGTCCACCGTGCAAATGTGCAAGCTGTGCGGGAAAACTCTCAACTCCACGCTCGAGTTGTACGACCACCTCAAAGCCGCCCATTCCCGGGAGCTGCTGGGTTACACCGCCACCCAGTCGACGAGCAAGCAGCAGGATTACGCCCCGGAGGAGGCGGACTATGAGGCCGAGCGGGACACGAGCGATCCCAGCGAGTACCAGGCGCAATACCCCTGCGACACGTGCGGAAAACAGTTCGTCGGCCTTCTCGCCCTGCAGAACCATCAGTGCATCACCCAGGTGCAGTCCCAGCCGCAGACGTTCGACTGCGAGATCTGCCAGAAGAGCTACACCTCCATTGCGGCCCTGAAGAGCCATCGCGGCTGGCACCTGCGCTCGCCGGACGGCAAGGCCGCTGCGAACAACTCCGGCCTCTGGATGCCACACACGAAGGTCACCAGCAAGGTCAGCAAGTTCGAGGTGCTGGACGCGGCGCAGTTCGCCAAGGTGTCGATGCCGGCGCAGTCGACCTCGGCCGCACTCGCCAAACGACGGCTGCCGCCCGAGGTCGAGGTCACGGTCGTCAACCCGAACAAGAAGATGCGCTCGGATGACTCGCTCGAGCTGGACCAGCAGAACAGCACGTCGGTGACCAGCGCCGAGGACCGCTACTGCAACATCTGCGACAAGGAGTTCACGAAGCGTGCCGCGTACCAGCGGCACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGTCCCGTCTGCGACAAGAGCTTCACGCGGAAGTCCACGCTCATAGTCCACTTGAAGAAGCACTACGAGGCGGAGGAGGGGGGTGGTTCTAACGCCCAGGAAGACGTAGTCCACACGTGCAACGTTTGCGAAATTCAGTTCGACAACGAGGCGGACTTCGCGGCGCACCGGGAGATGCACGAGGACGAGTCGGCGGAGTCCGAGGACGATGGCTCGGCCCACGTGCAACAGCCGGGCGAGTTCACGTGCGCGCAGTGCGGGGACGGCGTGGCGACGCCCCGGGACCTGATCGCCCACCGCGCCATGCACTCGACGCCGACTAAGTTCTTCTGCAACATCTGTAAAGTGTACTTCGCGCGGGCCATAGACCTGTCGACGCACACGCGCGCCCGCCACGCCGATAACGAAAAGGTTTTCTTTCCCTGCGCCATGTGCGACCGCTTCTACATGAACAAAAAGAGTTTGCAGAGGCACATCGAAATGTCCCACTGA
- Protein Sequence
- MSVDYDSVCRLCLASERDLVPIFPTTSSDDSEPLVLALKIKDCVSIQIEENDNLPSNICKKCNDNVINWDIFKGVCERTQNKLLNLNKKGTHQLEELNVKREPYADEAYDDGVVLDGSYPESESAEGPNKLQPEGPPILTSLGLTPRSDKKYVDPRMDWQRVHAILDIVQEDEVIDSLQVREECDIVHESEHDSDTDIELNEDIKQEYLEFKRGYVCRNKKSLSKNPKLLSSQTIAKARKVVSLRKKQTVLPHKYYARPRNTWQLFISDDLLELIVAATNAKMEMSEARYFPTKIREIKTLIGILYYHGITRATHQKCYDLWSHEFGAPCVQAAMKYERFKTLLQNLSFENNENEAIMELDIMKQFRQVFEIFALNCRTSFAVGNTVVIDEVMVPVYGPCPFRYQIKKKKLKSGIKMVLVVDPNNFYVSNLDVITDPYFGSDDIAMKLLQHLAGTYKTVVMDSWFSSSTLVNKLLNEYKLFSLAAINERNELLPPLFVSHHRKNRVLLNGFLDEDVLLMSLIDSNQKTVNILTNEPKHYKKSNVNSITPISLYKKHQSAVEVIDVLMHYYTTMQHTNDWTLSIFFMLLNIASANAQVMWTSQSPNTSMKRRFFIRELALSLMDAQYEPILTELNLSSKKRKMSMEHLSPSYKNRRRCKPCHALFKRDRRTKTYCGVDSDKEDYEEGDDQEEVAEEDEEEEVKEQKVFSDIPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELGAHNFDRYTNNHLAKKSIMQPKLRPNPFNPKARLMPNPISHKMQYMNMAKPLQKKIMPQKMVACPKPIPIKNTKSNQMTLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFAVETILSEPDGDANQQDEDDDGEEQNKRGHNYDTVDMDSENEIEIARQQSDVNYDQEQEQKEDDPKEDLNENDDSDKNSAGDNATSENKHETEIEDHGEKTNEDLTENKDKDEQDANDDDEDDEEMPPIAPVVEINEEINNSYHNDETNDNEDDYLDDTVDPNDAADLDSTPKILDPDKIYVTKTQRDFIVKYRDIIQQINTMTCLCCNREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKDNKVAYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCRSRFKDKALWKKHIRNGECTVYIACDLCTETFITMQEFNDHALAVHAGQFDPDNQNKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEQPHYCQHCDSKFKEAGDLNKHIYMEHSDRSMVQNNEPDMSVVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCTICANSYSTASKLSEHVQQSHPGKNHTPAGGENVFYCEVCVRGFKSRQAYSNHMRIHSKLPQVNRKADQKSFAPQIIGKPILQYPLMQQGFGFKSNLNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVNDRNDSEENTMHASTEEDEYNVDENGAALSTPQFNSFNFTSMPAATPAPQAAPVPPPPKTPQEAMQFACDLCSKRFPLKTSLWKHKRAKHGIINAATIGTADIQPSGSESGAGGRSSCTICKITFADKKSYYRHRKNVHKSTVQMCKLCGKTLNSTLELYDHLKAAHSRELLGYTATQSTSKQQDYAPEEADYEAERDTSDPSEYQAQYPCDTCGKQFVGLLALQNHQCITQVQSQPQTFDCEICQKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPHTKVTSKVSKFEVLDAAQFAKVSMPAQSTSAALAKRRLPPEVEVTVVNPNKKMRSDDSLELDQQNSTSVTSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHLKKHYEAEEGGGSNAQEDVVHTCNVCEIQFDNEADFAAHREMHEDESAESEDDGSAHVQQPGEFTCAQCGDGVATPRDLIAHRAMHSTPTKFFCNICKVYFARAIDLSTHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00406079;
- 90% Identity
- -
- 80% Identity
- -