Pari021334.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phengaris arion
Gene Symbol
Hr39
Assembly
GCA_963565745.1
Location
OY751440.1:19079051-19093268[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.034 7.3e+02 0.5 4.1 62 173 184 304 124 324 0.54
2 4 5.9e-08 0.0013 19.5 0.1 1 20 405 424 405 430 0.91
3 4 0.05 1.1e+03 -0.0 0.0 80 118 455 490 435 517 0.74
4 4 8.9e-61 1.9e-56 193.5 0.0 209 408 519 719 506 719 0.94

Sequence Information

Coding Sequence
ATGGGTGACGCTGATCCTGTCAAGGTAGAAGGGGGACATATCTCTGTCACAACCATCAGCATGTCGCGTCCGGACAATGGTCAATTCTCATACAGCTCTAGTGGAGTCCGTATCAACGTGTCGTCCGACATCCACGACGAGGACTCCACAGACGCCGAAATATCCAAGATTGATTTTAATCAACATCAATATGagGTCAACATGCGGAATAAGAAGAAGCGGTCTAGCGGTCAGTTTGAACCCCCCCATCCCTCCCAGGAGAGACCCATGTCGTGGGAGGGCGAGCTCTCCGACTCTGAAATGGTCATAGACACCAGTGGGAATAATGACGAGAACAGCAACTCCCTACAGTCTTCCCGGGACTCCATAGACACTCTCCGCAATGTGACCGTCAAGTCGGAGCCCAAGAATGATCAAGAAGGCCGCGTCCTGGACTTGAAGTACAACGCGCTCCAGCCGCACCAGAGGAGTCTCAGTATGACCAGGATATCGGACAGCAACCACCTCTCCCTGTCGCGGCGGCCGATGTCGCCCGCGGGCAAGCCGAGCTGCCCCGAGTTCGAGCCACCGCCGAACCCGCTGGCTGAAGTACAGAACCTTACCATCAAGAAGGAACAGCTTTCAGAGTTTAAATGCGAGCCACTCAGCATGGAGAAGATCCTAAGCGTGGGCTCGCCGCTGCTGGGCCGGCTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCCGTACACTCCATGTACACGCACAGCGTCTACAGCAGTCCCTCAGCCAGCCCGCGGCCGCAGCGGCTGTACACACCGTCGCTGTCGCGCAACAACAGCGACGCGTCGCACTCCTCCTGCTACTCCTACAGCTCCGAGTTCTCGCCCACGCACTCGCCCGTGCAGAGCCGGCATCCCCACTTAGTATACCGGGAGGCTGGTGGCGCGGAGGAAGATGACGTTGGCGAGCAGCTGCACCACCACCAGGGCATCAGCCGGCAACAGCTTATCAACAGtccCTGCCCCATCTGCGGCGACAAGATCTCCGGATTCCACTACGGGATATTCTCCTGTGAGTCGTGCAAGGGGTTCTTCAAGCGCACGGTCCAGAACCGTAAGAACTACATGTGCCTGCGCGGCGGGAACTGTCCTGTCACTGTCGCGACGAGGAAAAAATGTCCCGCGTGTCGATTCGATAAGTGCCTGCACTGTGGGATGAAGCTTGAAGCGATCCGCGAGGACCGCACGCGCGGCGGGCGCAGCACGTATCAGTGCTCGTACTCGCTGTCCGGTGCCGCGTCCACTGGCTCGCTGTtagccgcgcccgcgccgcccgcgccgctgcGGCACGCCTCCAGCCTCACTTGTGTGAACGGTCCAGCGTCGTACGGCAGTCGGGGCGAGAGCAGCAACAGCCGGCTCCCGCCTGACATACCGCCGTTATTGCAAGAGATAATGGACGTGGAACACCTATGGCAGTACAACGAATCGGACCTGCCGCACCGAGGCTCGGGGTCGAACCCGCTGCTCGCCGCCTCCGGCATAACCGCCACTGCTGCAAGCGCAGACTTCCTAGCTGATTTGTGTCATGTCGCCGACCACAGACTATACAAGATAGTGAAGTGGTGCAAGAGCTTGCCGCTGTTTAAGAATATCTCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGCGGCGTCGCCTGCCCCGGCGAGGTGCGTGTCGGCGGCCCCAACGGCATCACGCTGCAGCAGAGCGTCAAGTACGGCCTCACGCCGTGTATCGAGCGCATGCTGAGCTTCACGGACCACCTGCGGCGGCTGCGCGTGGACCGCTACGAGTACGTCGCGCTCAAGGTCATCGTGCTACTTACGTCAGACGCGGCGGAGCTGCGCGAGGCGGAGAAGGTGCGCGTGTCGCAGGAGCGCGCGCTGGCGGCGCTGGCGGCGTACACAGCGGCGCACTCGCCCGACCAGCCCGCCAAGTTCGGCGAGCTGCTGCTGCGCATCCCGGACCTGCAGCGCACCTGCCagTTCTTCATGCAAGTCGGCAAAGAGATGTTGAACCCGGCGAACAAAAACAAAGATGGCGACGGGCCCAGCTTCAACCTCCTCATGGAGCTCCTGCGAGGCGACCACTGA
Protein Sequence
MGDADPVKVEGGHISVTTISMSRPDNGQFSYSSSGVRINVSSDIHDEDSTDAEISKIDFNQHQYEVNMRNKKKRSSGQFEPPHPSQERPMSWEGELSDSEMVIDTSGNNDENSNSLQSSRDSIDTLRNVTVKSEPKNDQEGRVLDLKYNALQPHQRSLSMTRISDSNHLSLSRRPMSPAGKPSCPEFEPPPNPLAEVQNLTIKKEQLSEFKCEPLSMEKILSVGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPQRLYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPHLVYREAGGAEEDDVGEQLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLHCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLAAPAPPAPLRHASSLTCVNGPASYGSRGESSNSRLPPDIPPLLQEIMDVEHLWQYNESDLPHRGSGSNPLLAASGITATAASADFLADLCHVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVACPGEVRVGGPNGITLQQSVKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAAELREAEKVRVSQERALAALAAYTAAHSPDQPAKFGELLLRIPDLQRTCQFFMQVGKEMLNPANKNKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00985246;
90% Identity
iTF_00744841;
80% Identity
iTF_01178729;