Pari020127.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751440.1:1065904-1067670[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-07 9.7e-05 23.2 0.0 3 42 12 54 10 57 0.78
Sequence Information
- Coding Sequence
- ATggttaacaaatataaaagaaaaacctCTAATGCATCATTGGACGAGGCAGTTATGAAACTTGCTATGGAAGAAGCTAGCAAAACCTCAGTGAAAGGTGCGGCTAAGAAGTACGGTATAAACTTATCCACGTTGCAGCGGCACATCAAAAAAGGATGCCCGAAGAAGAAACTTGGCAGGTACACAACTGTATTCACGGATCCTCAGGAACTCGAGCTTCTTGAATATGTGTTTCATATGGAAGGTTTGTTTTTTGGACTGACCAAGAAAGAATTCTTAGAACTCGTGTACCAGTATGCCGAAAACAACAATATTCCACACCCATTCAAAAATGGAATGGCAGGTGAAGATTGGTACATTGGGTTTAAAGTACGACATCCTGATTTAAGTCTACGCCGTCCAGAACCGACGTCATTAGCACGCGCTAGGGGTTTTAACAAACCACAAGATATGCTAGTGGGAGAGATCGATAAACATAAAATTGACGCGACGCGCATTTACAATGTTGACGAAACTGGAATTCAGACCAATAGCAACAAGCCGCCTAGAGTTCTTAGTAGATCAGGAAAAAAACAGGTTGGTGTGATATCTAGTGTCGAGCGTGGTAAACTCACAACAGTGGTTTGCTGTTGCAATGCAGCAGGTGCGTTTATACCCCCATTTTTAATCTTTGGGAGAAAGCGAATGGTGCCAAGACTTCTAGATGGCGCTCCACCTGGATCAGTCGCAAGCTGCACAGACAACGGCTGGATAAATGGCCCAACATTCTTAGACTGGCTTCGACATTTTGTGGCTATGACTAGGCCAACTAGTgagcaaaaaataattttagtaatggACAATCACgtgtcacataaatatttagaagTCCTGGATTATGCTTCAAAGAACAATGTGATTTTTGTGTCTTTTCCACCACACACAACGCACCGATTACAGCCTTTGGATACGTGTGTTTACGGAccacttaaaaattatttcgaaCAAGCTGTTTCGGTATTTCAGCGTACCCACGTCGGGCGCATTATTTCACAGTATGACGTGGCCAGATTGTTTGGTGAAACCTACATGAAAGCGGCCAGTGCCCATAACGCAGTAAAAGGGTTTTCATCTACTGGCATTTGGCCAACCAATTGGAACGTATTTGACGAAAGTGATTATATGCCATCTACTTTGACAGACAGGCCGGAGCCAGTTACTGGAAATGAGGAGTCGGCAAATATTCAACCCGCTGTGTTGAATATCGAGATACCTACTAACGATAACACCGATATTACAGAAACACCGACTATTTTAAGCGAAACAGCAGAAGTGACAGCAGGACAAACTGAAGAAACAGCATCTGAGATGCAGTCCAACAATTCTCCGCCACTAGTAGCTGACACAGACTTGGAGTTACAGGTTACTGAAGTCAACAGGCCCACAACTCCGGAAATGCAGCCGTCACCACCAATAAAACAGCATAAAACTCCAATAGACATCAGACCACTCCCTCAAATCACACCGAATATAACTACACGAAAACCTAAGGCACAAAAGGCTGAAATACTAACAAGCACAACAGTAAAAGAGGAACTAAgggaaaaagaaaacaaaaagaaGAAACCTACTAACACTAAACTTAAGACagtgaagaaaaatttaaaggaaCCCAGCACTAATAAGAAGGAAGTAATAGCTTGTTGTAGTAATACCAACAAGAGACAGGTAAGATCCAAACGTGGTCCAAAAAACAGTCAGAATGACAAAACTGAATACGCTTGCTAA
- Protein Sequence
- MVNKYKRKTSNASLDEAVMKLAMEEASKTSVKGAAKKYGINLSTLQRHIKKGCPKKKLGRYTTVFTDPQELELLEYVFHMEGLFFGLTKKEFLELVYQYAENNNIPHPFKNGMAGEDWYIGFKVRHPDLSLRRPEPTSLARARGFNKPQDMLVGEIDKHKIDATRIYNVDETGIQTNSNKPPRVLSRSGKKQVGVISSVERGKLTTVVCCCNAAGAFIPPFLIFGRKRMVPRLLDGAPPGSVASCTDNGWINGPTFLDWLRHFVAMTRPTSEQKIILVMDNHVSHKYLEVLDYASKNNVIFVSFPPHTTHRLQPLDTCVYGPLKNYFEQAVSVFQRTHVGRIISQYDVARLFGETYMKAASAHNAVKGFSSTGIWPTNWNVFDESDYMPSTLTDRPEPVTGNEESANIQPAVLNIEIPTNDNTDITETPTILSETAEVTAGQTEETASEMQSNNSPPLVADTDLELQVTEVNRPTTPEMQPSPPIKQHKTPIDIRPLPQITPNITTRKPKAQKAEILTSTTVKEELREKENKKKKPTNTKLKTVKKNLKEPSTNKKEVIACCSNTNKRQVRSKRGPKNSQNDKTEYAC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01527113; iTF_00000281; iTF_01064608; iTF_00658337; iTF_00658338; iTF_00658339; iTF_00658340; iTF_00658341; iTF_00658348; iTF_01072437; iTF_00658336; iTF_00658333; iTF_00658335; iTF_00658334; iTF_00680480;
- 90% Identity
- iTF_01527113;
- 80% Identity
- -