Pari013430.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751436.1:7761291-7762260[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-07 0.0002 22.2 0.0 5 36 19 50 18 57 0.92 2 2 8.7 1.8e+03 -0.1 0.0 23 31 107 115 105 115 0.86
Sequence Information
- Coding Sequence
- ATGCCTCGCAACTATTCTAgaaaaacagacagacagcgtTGGGATACAATCTCCATGGAAAAGGCTATTCAGGCTATAAAGAATAATGAAATGGGCTGGCTATTGGCGTCTAAAGCATTTAATATCCCGCAATCGACTCTTAGAAGACATACACTAGAACAAAATAAAGTCTTAGCTCCAACTAAAAAAGGTATGGGTAGGTACAAGAGTGTCTTCACATATGAGATGGAACGAGAACTGGTGGAGCATATTAAATTACTAGAAACGAGATTGTTTGGATTCACGAGGAAGGAAGTTTTAGAATTGGCCTACCAATTTGCAGAAGTTTATAACATTCCTCATAATTTTAATAACGAAAAAAAGATGGCAGGCAAAGAATGGTTGGCTGGGTTTCGACGTAGACACCCGGACATATCCTTAAGGATACCTGAAGCAACTTCAGCTGCAAGAGCCCAAGCCTTCAACATGCCACAAGTGGCATTGTTTTTCAATACTTACCAAGAGATTATTCAGAGTAATAAAATTTCTCCTCATAGACTCTACAATGTCGATGAGTCGACATTATCAACAGTCCAGAGACCACAAAAGGTATTTGCTGCTACTGGGCGTAAACAGGTTGGGGCTTTGACTAGCGCTGAAAAGGGGTCTCATGTGACAGTTGTTTGTTACATGAGTGCAAATGGCCATTTTGTTCCACCGTGTTTAATTTATCCCAGAAAAATCATGAAACAAGAGTTAATAGACGAAGCTCCAACTGGTAGCTTGGGCATTGCGCAAGAATCAGGTTGGATGACAACCATTGTATTTCATAAATGGTTAGTGAACTTCAAAGTGCTTTTGGTAGTTGATGGTCATATCAGCCATAAAGGCATTGAAAGCTGA
- Protein Sequence
- MPRNYSRKTDRQRWDTISMEKAIQAIKNNEMGWLLASKAFNIPQSTLRRHTLEQNKVLAPTKKGMGRYKSVFTYEMERELVEHIKLLETRLFGFTRKEVLELAYQFAEVYNIPHNFNNEKKMAGKEWLAGFRRRHPDISLRIPEATSAARAQAFNMPQVALFFNTYQEIIQSNKISPHRLYNVDESTLSTVQRPQKVFAATGRKQVGALTSAEKGSHVTVVCYMSANGHFVPPCLIYPRKIMKQELIDEAPTGSLGIAQESGWMTTIVFHKWLVNFKVLLVVDGHISHKGIES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01430743;
- 90% Identity
- iTF_01153876;
- 80% Identity
- -