Pari037142.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- clz9
- Assembly
- GCA_963565745.1
- Location
- OY751452.1:588258-590861[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-09 1.2e-06 29.4 0.0 1 35 14 48 14 56 0.91 2 2 8.3 1.7e+03 0.0 0.0 25 39 773 787 772 789 0.84
Sequence Information
- Coding Sequence
- ATGGCCCGTACCTACGTCCGTAAGAAAGTTAAACCATACACGCCAGAAGACTTAGCCGAGgcgttacaaaaaataaaaaatggagaaCTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGTGAAAATATGCATTCTAAGTATTCCAGGCCAACTGCAGGTAGACCTACAATCTTTTCATTGGAAGAAGAAGAACGTTTAGCAGATGCcataaaaataatggaaaaatgGGGATTTGGATTGTCAAgacaagaaattttaaaaattgtcgcTGAATACGTAACGGCaaataagattaaaacgccatttaaaaataacacgcCCGGTCCAGATTGGTTCATCAACTTCCGCAAACGTCACCGCCTCTCTATAAAGAAAGCACAGCCCGTGGAATATGTACGCAAAAAAATGAcggatccatttttcattttcGAGTACTTCGACTTGCTAGAAAAGACTTTGATAGAGTTGGATCTTATTGACAAACCTCAAAACGTCTGGAATCTAGATGAAACGTCTCTGTGTCTGGACCCTACTAGAACAAAAGTAGTGGGAGCCATCAATAAACCCTGTGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCACCTTTAATTGTCTTTAAAGGAAAATATGTTTGGGATCAGTGGATGGCTGCAACAGATGATTACGACTTCGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACCGACATTTTCTATAACTACATAAAAACGATTCTCATTCCAAGTGTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGATGGCCACTCTACCCATGTCGATGTAAAAGTTATAGAATTGGCAATTGAAAATGGCATAACCATTCTCAAGCTCCCACCACATACATCTCATTTGCTTCAACCGCTTGATATAGCAGTTTTCAAATCCTTTAAGAGCAAGTGGGATGCCAAACTAGTCGACTGGCAGCGTCGAAACATTGGCACTAAAATGGCGAAAAACATATTCTCGAAAACACTTGCTAATACATGGCAAGAAACCGCACCCGACATCATTAAAAATGGGTTTAAAAAAGCTGGAATTTTTCCGTTTGATGCCAGTGTTATACCTGTGGAAAAGTACGATCCAAATGCCTATAGAAGGTACCAGTTAATAAGAGAAGAGCGTTTGCTCCAAAGTCAACAAAATACAAGTAGTCCGGAAtcattgaaaaaaatttgtatcgATTATTTTAATGAACAGAATAACATACCTGACGCAACTCTTCACAAACAGTGCCCACCGGACCAACAAAACGACACTCTTGGGGAACCGAAGTCAATAAACCACCAATTTACTAATATTCCAACTGAAAATGTAACCTTATTATCTCAAATTCCAAAATCTGATAGCCAGATGACGGTTTTTTTAGCTGAAGATTCAACCTCTATGCCAACATGTTTAAAAGAAGCTCGTCCTGATCCGAAAAACAACGAAACAGTTAAAAatcctaatataattataacatctAACATTGTCATCAAAAAATCCTCCATAACTTTCAATGCAGCGCCACAAACACCTCTTTCACCAGCATCTCCAAGAATCTTCACATTTGAAGAAGCTTTTCTGAAAAAGATACAAcaggaaaagaaaaacaatgatactgtgataaaaaaaaaacgtatctCAAAAGGTGCCGAAGTGATAACCAAGTCTATGAGTAAGAAACAAGAATCTAAAGACGAAGATAAAGAAACTAAGAAAAGTATGAAGAAGCAAGATAACAAGGATAGTCAGAgcaaaaattctaaaacaaaatttaaacaaaacttgGATATAAATCGACCGGGTACCTCAGGCCTTCAAAAAAGTACGAAGCGAAAGCGCGTCCCTTCAATGGATTCCACAACAAGTATATCGGATATAATGAGCTTGTATAGTGACTCAGAACTACTTGATTTTGATGACTTTGAAGAATTTCATGTATTTAAAGAAGATTTTACCCCACTAAATATAGACAATAAACGAAGATACGAAGAAtcacataatattagtttaagaAAGGGAAAAGGTAAAGGCAAAAAAAGTATTGAATGTAAAGAAAACCAAACCAAAGATGAAGAAAATGAAAGTAACAGCTGTATGAGCGGAAGTCATAAAAAATTGTTGAAGAgtgctaaaaaaataaaaatagaaaaaggcGAACGCTATCAAGACAGTGACATAAAAGAGGATAGTAGTGATAGTAACGAAAATTACAACAACAATGAAAGGaatgacatttttaatataaacgaCACGGTCCTAGTAAGATATTTTATGAGGAACAAATGGGTTCACTATATAGGGTTTATCGAGAAAATTGACCAGCTGGATGTAGAAACTTACTTCACTATTGATTTCTTAAAAACTGTAAAGAAACCACCCCTAATATTTGTAAAACCAAAAAGAAAGGATTGTGACGTAGTTCCGAAGGCATCaatcgtaaaaataataaaaattgaattaaaaaatgataataaaaaagaatattatttgtgtaatgACGTTGACTCTGTGTTTTTTTAa
- Protein Sequence
- MARTYVRKKVKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSENMHSKYSRPTAGRPTIFSLEEEERLADAIKIMEKWGFGLSRQEILKIVAEYVTANKIKTPFKNNTPGPDWFINFRKRHRLSIKKAQPVEYVRKKMTDPFFIFEYFDLLEKTLIELDLIDKPQNVWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLIVFKGKYVWDQWMAATDDYDFELSYAASPKGWMQTDIFYNYIKTILIPSVGQERPVLLVYDGHSTHVDVKVIELAIENGITILKLPPHTSHLLQPLDIAVFKSFKSKWDAKLVDWQRRNIGTKMAKNIFSKTLANTWQETAPDIIKNGFKKAGIFPFDASVIPVEKYDPNAYRRYQLIREERLLQSQQNTSSPESLKKICIDYFNEQNNIPDATLHKQCPPDQQNDTLGEPKSINHQFTNIPTENVTLLSQIPKSDSQMTVFLAEDSTSMPTCLKEARPDPKNNETVKNPNIIITSNIVIKKSSITFNAAPQTPLSPASPRIFTFEEAFLKKIQQEKKNNDTVIKKKRISKGAEVITKSMSKKQESKDEDKETKKSMKKQDNKDSQSKNSKTKFKQNLDINRPGTSGLQKSTKRKRVPSMDSTTSISDIMSLYSDSELLDFDDFEEFHVFKEDFTPLNIDNKRRYEESHNISLRKGKGKGKKSIECKENQTKDEENESNSCMSGSHKKLLKSAKKIKIEKGERYQDSDIKEDSSDSNENYNNNERNDIFNINDTVLVRYFMRNKWVHYIGFIEKIDQLDVETYFTIDFLKTVKKPPLIFVKPKRKDCDVVPKASIVKIIKIELKNDNKKEYYLCNDVDSVFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076362;
- 90% Identity
- iTF_01076364;
- 80% Identity
- iTF_01178405;