Pari038725.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751453.1:6026441-6028648[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-10 1.4e-07 32.4 0.0 1 40 15 54 15 58 0.89
Sequence Information
- Coding Sequence
- ATGCCGAGGAACAGAGTAGAAGAAAGAAAAGTAGGTGCTCATACACACGAGCAAATGCATGAAGCATTACAGGCCATAAAGAATGGAAAAAGTATGAGACAAGCAGCTGTTGATCATAAGATTCCTTTTACAACACTTCAAAGGTatcaaattaaagaaaaaaatgcgCAAAACCAGCTCACAAGGTTGACGCCCAACTACGCGGTGAACCAAGTATTTTCAAGAGACCAAGAGTTAATATTGaaacaatattacataaaatgcGCAACCCTGTTTTATGGTCTGTCTATTATGGATTGTAGACAAGTGGCGTACGAAATGgccaaaaataataacatcagAATGCCGAAGTCCTGGACAGATAATCAATTGGCTGGGATAGATTGGCTACGGGGTTTTCGCCAACGACATCGGGATTTGACGCTGCGTAAGCCCGAGGCCTGCAGCTTAGCACGAGCATCGGCTTTTAACAGGGAGACAGTCAAtcatttttatgataatttgGAGGACGTGATTAAGCGCCATCCTGCATTTGCGGATGGGACAAGGATTTATAACTTGGATGAAACCAGTACTACCACTGTGCAAAAGACCCAACGGGTTATAGCTCCAAAAGGTAGACGAAATCTCTGCAAGGTTACTAGTGGTGAGAAGGGGACACTTGTCACTACCTGCAACATCATAAGCGCTGGGGGTCAGGCAGTTCCGCCAGTCCTTATCTTCCCAAGAAAAAATACGAACCCTCGCATGGCTGTCGGTACCCCACCTGGATCACTGATTTTGGCAAACCCATCTGGATGGATGAACAGCGAACTGTTTTTAGATGTAATGAAACATTTCATACGAAGAACGGGAACTTCCAAAGAATACCCATCGATTTTAATAATGGATAACCATGAGTCTCACCTTTCCATAGAAGCCCTCGATCTCGCGAAAGAGTCTGGTGTTACTGTGCTTACATTGCACCCACATACATCAGCGCGACTTCAACCACTGGATGTTGGTATTCACGGACCTTTCAAGACGTTTTACTATTCCGCCATGAGTTCCTGGATGTTACGCAATCCTGGATGCCCTGTCACTATTTATGATGTGGGAGCATTAATTGGCCAGGCTTTCGCAAAGTCTATGACACCATCTAATATAATACAAGCATTTAGAAAAACAGGAATTTTTCCTTTCGATCGACATGTTTTTACTGACGAAGACTTCGCACCCAGCAGTGTTACAGATAGACCTGAAAATGCTCAACCTGTAAATGATTCCAGTGAAGAACGTGCAATCACTGACCAACCACCGATTTTAGAGCTAGAAGAGAACTCACTGCATTTACAAATAACTGACTCTCCAAGACCCTCCACTAGCACTGCTGGAGAAGCATCTAGAGGTACAATGAGCCCGTCTGTGCTGGAAAATTTGGACGAATATTCAGCAATTCCTTCGACGCCAGTTTTTTCCACTCCCCAAAAATCTGTTTTAACTGATCTATCTAATGTTTCGCCTCGCTCTTTCGATGGTTCTACAAGTCAAAATGCAGTTATTATATCAACTACTGTTCCTGAAAGAGATTCAACTAATACATCTGGAATCAAGTCTCTTATTACACCTGATCAGTTTCGGAAGCCACTTAAAGCACCCACAAGAACTGGAAAGAGAAAGCCGAGAAAACTAGGTAAAAGTCTTATAGCCACAGACACACCTGAAAAAAATGCTATTGCAGAACAGAAAGCAGCCAAAAGGAAGAAAGAAACTAAAACTAAAGGGATAAGAAAGAAAGCTATTCGTCAAGTGCTGCAAAGTGATTCAGAAGATGAAGATGACATGATATTGAACGACGAAACTGACGATGAAGGAGACTGGGTGGAAAGTGAAGAGACCATTATAACAGAGGATTTACTAAGAAAACCACTTGTGCGATTACCAAAGGAAGGTGAATACGTATTGGTACAATTTTGTTCCAAAAAccagaatattttctttgttagtaAAGTTCTTGAGGAACGAAATCTCGATACTTTAGAATTGTATGTGTCTTTTTTAAGGCACAAAAACGGTAAATTTGTTATGCCTAATGTCCCAGACTTATCATATGTGAAAGATGACGACATAAGGCTCATATTGCCAACGCCCACCGTCAGTGGAAGTACTGCTAGGCAACAATCATACTATGCATTTCCTATTGATTTAAGTAACATTAACATTCGTTGA
- Protein Sequence
- MPRNRVEERKVGAHTHEQMHEALQAIKNGKSMRQAAVDHKIPFTTLQRYQIKEKNAQNQLTRLTPNYAVNQVFSRDQELILKQYYIKCATLFYGLSIMDCRQVAYEMAKNNNIRMPKSWTDNQLAGIDWLRGFRQRHRDLTLRKPEACSLARASAFNRETVNHFYDNLEDVIKRHPAFADGTRIYNLDETSTTTVQKTQRVIAPKGRRNLCKVTSGEKGTLVTTCNIISAGGQAVPPVLIFPRKNTNPRMAVGTPPGSLILANPSGWMNSELFLDVMKHFIRRTGTSKEYPSILIMDNHESHLSIEALDLAKESGVTVLTLHPHTSARLQPLDVGIHGPFKTFYYSAMSSWMLRNPGCPVTIYDVGALIGQAFAKSMTPSNIIQAFRKTGIFPFDRHVFTDEDFAPSSVTDRPENAQPVNDSSEERAITDQPPILELEENSLHLQITDSPRPSTSTAGEASRGTMSPSVLENLDEYSAIPSTPVFSTPQKSVLTDLSNVSPRSFDGSTSQNAVIISTTVPERDSTNTSGIKSLITPDQFRKPLKAPTRTGKRKPRKLGKSLIATDTPEKNAIAEQKAAKRKKETKTKGIRKKAIRQVLQSDSEDEDDMILNDETDDEGDWVESEETIITEDLLRKPLVRLPKEGEYVLVQFCSKNQNIFFVSKVLEERNLDTLELYVSFLRHKNGKFVMPNVPDLSYVKDDDIRLILPTPTVSGSTARQQSYYAFPIDLSNINIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164258; iTF_00327019; iTF_01076368; iTF_01076341; iTF_01076342; iTF_00448982; iTF_00448983; iTF_01178390; iTF_00667328; iTF_00667322;
- 90% Identity
- iTF_01178390;
- 80% Identity
- -