Nrev026130.1
Basic Information
- Insect
- Nycteola revayana
- Gene Symbol
- -
- Assembly
- GCA_947037095.2
- Location
- OX344857.2:8762601-8764793[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-09 3e-07 31.0 0.1 1 41 15 55 15 59 0.93
Sequence Information
- Coding Sequence
- ATGCCGAGGAATAGAGTAGAAGAAAGAAAAGTAGGTGCTCATACACATGAGCAAATGCGTGAAGCATTGCAGGCCATAAAAGATGGAAAAAGTATTAGACAAGCTGCTGCAGACCATAATATTCCATTTGCAACACTCCAAAGATATCACACTAAAGAAAAAAATGCGCAAAACCAGCTCACTAGGTTGACGCCAAACTACGCGGTGAACCAAGTATTTTCCAGAGACCAAGagctaatattaaaacaatattacataAAATGCGCAAGCCTTTTCTATGGTCTGTCTGTTAAGGATTGTAGACAAGTGGCATACGAAATGGCCAAAAGTAATGGGATTAGAATGCCAAAGACCTGGACAGACAACCAATTGGCTGGAATAGATTGGCTAAGGGGTTTTCGCCAACGCCACCGGGATTTGACGCTGCGTAAACCCGAGGCATGCAGCTTAGCACGAGCATCGGCTTTTAACAAAGAAACTGTCAATCATTTTTACGATAACTTGGAGGACGTGATCAAGCGCCATCCTGCATTTGCTGATGGGACAAGAATTTATAACTTGGATGAAACTGGTACCACCACTGTACAGAAGACCCAACGAGTTATAGCGCCAAAAGGTAGACGAAATCTCTGCAAGGTGACCAGTGGTGAGAAGGGGACACTTGTCACTACCTGCAACATCATAAGCGCTGGGGGTCAAGCAGTTCCACCAGTCCTTATCTTCCCAAGAAAAAATACGAACCCTCGCATGGCTGTTGGCACCCCACCTGGATCACTGATTCTGGCAAACCCATCTGGATGGATGAATAGTGAGCTGTTCTTGGATGTAATGAAGCATTTCATACGAAGAACGGGAACTTCGAAAGAATACCCATCGATTTTGATAATGGATAACCATGAGTCTCACCTTTCCATAGAAGCCCTCGACCTCGCGAAAGAGTCTGGGGTTACTGTGCTTACATTGCACCCACATACATCAGCGCGACTTCAACCACTGGATGTTGGTATTCATGGACCTTTCAAAACGTTTTACTATTCTGCCATGAGTTCATGGATGTTACGCAATCCTGGATGCCCTGTCACTATTTATGATGTGGGAGCATTAATTGGCCAGGCTTTCGCAAAGTCTATGACACCATCTAatataacacaagcatttagaaAAACGGGTATTTTTCCTTTTGATCGACATGTTTTTACTGACGAGGACTTTGCACCCAGCAGTGTTACTGATAGACCTGTAAATGATGTCAGTGAAGACCACGCAATCACTGACCAACAACCGATTTTAGAGCTAGAAGAGAACTCACTGCCTTTACAAATAACTGACTCACCAAGACCATCCACTAGCACTGCTGAAGAAACATCTAGAGGTACAATGAGCCCATCTGTGCTGGAAAATTTGGACGAGTATTCAATAATGCCTTCGATGCCAGTTTTTTCCACTCCAGAAAAATCAGTTTTAATTGATCTATCTAATTTTATGCCTTCCTCTTTTGATGGTTCTACAAGTCAACATGCAGTTATTATGCCCACTACTGTTCCTGTGAGTGATTTAACTAATACACCTGGAATCAAGTCTCTCATTACACCTGATCAGTTTCGGAAGCCTCTTAAAGCACCCACAAGAACTGGAAAGAGAAAGCCAAGAAAACTAGGTAAAAGTCTTATAGCCACGGACACACCTGAAAAAAATGCTATTGCAGAACAGAAGGCAGCCAAAAGGAAGAGAGAAACTAAAACTAAAGGGATAGGAAAAAAAGCTATTCGTCAAGTGTTGCAAAGTGATTCAGAAAATGAAACTGACATGATATTGAACGACGAAACAGACGATGAAGGAGACTGGGTGGAAAGTGAAGAGACCATTATAACAGAGGATTTACTAAAAAAACCACTTGTGCGATTACCAAAGGAAGGTGAATACGTATTGGTacaattttgttctaaaaaccagaagatattttttattggcaaAGTTCTTGAGGAACGAAATCTTAATACTTTAGAAATTTATGTGTCTTTTTTAAGGTACAAAAGGGGTAAATTTGTTATGCCTAATATCCCAGACTTATCATATGTGAAAGATGCCGACATAAGGCTCATATTGCCAACGCCCACCGTCAGTGGAAGTACTGCTAGGCAACAATCATATTATGCATTTCCTGTAGATTTAAGTCACATTAATATTCGTTGA
- Protein Sequence
- MPRNRVEERKVGAHTHEQMREALQAIKDGKSIRQAAADHNIPFATLQRYHTKEKNAQNQLTRLTPNYAVNQVFSRDQELILKQYYIKCASLFYGLSVKDCRQVAYEMAKSNGIRMPKTWTDNQLAGIDWLRGFRQRHRDLTLRKPEACSLARASAFNKETVNHFYDNLEDVIKRHPAFADGTRIYNLDETGTTTVQKTQRVIAPKGRRNLCKVTSGEKGTLVTTCNIISAGGQAVPPVLIFPRKNTNPRMAVGTPPGSLILANPSGWMNSELFLDVMKHFIRRTGTSKEYPSILIMDNHESHLSIEALDLAKESGVTVLTLHPHTSARLQPLDVGIHGPFKTFYYSAMSSWMLRNPGCPVTIYDVGALIGQAFAKSMTPSNITQAFRKTGIFPFDRHVFTDEDFAPSSVTDRPVNDVSEDHAITDQQPILELEENSLPLQITDSPRPSTSTAEETSRGTMSPSVLENLDEYSIMPSMPVFSTPEKSVLIDLSNFMPSSFDGSTSQHAVIMPTTVPVSDLTNTPGIKSLITPDQFRKPLKAPTRTGKRKPRKLGKSLIATDTPEKNAIAEQKAAKRKRETKTKGIGKKAIRQVLQSDSENETDMILNDETDDEGDWVESEETIITEDLLKKPLVRLPKEGEYVLVQFCSKNQKIFFIGKVLEERNLNTLEIYVSFLRYKRGKFVMPNIPDLSYVKDADIRLILPTPTVSGSTARQQSYYAFPVDLSHINIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178394;
- 90% Identity
- iTF_01076341; iTF_01076342; iTF_00667328; iTF_00667322;
- 80% Identity
- -