Pari009487.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phengaris arion
Gene Symbol
-
Assembly
GCA_963565745.1
Location
OY751434.1:7134189-7136741[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-11 9.7e-09 36.0 0.0 2 37 12 46 11 52 0.91

Sequence Information

Coding Sequence
ATGTCTCTTTCAAGACCCATATTACAATACCccgaagaaaaattaatccaagcTTTAGATGCTATCAGAAATGGGATGACAATCAGGGAAGCTAGTAGTAATCATGGCGTTCCTCGAGGCACACTTCAAGATAGACTTCATCTTCGAGTTCCTGAGGGTCCTAGAAGAATGGGTCCCGAATCCATCCTCAACAAATATGAAGAAGCCGAAATTGCGACCTGGCTTAAAGATCTAGCAATTTGCGGGTTTCCCCAAAAACCAGATAACCTACTGAACACTGTTCAACAAATGATGATCGAAGATGGCAGGCCGAATCCTTTCATAAATGGAAGACCAGGAAAGAAATGGATGGGTTCTTTTTTCAAACGGAACGAATCAATTTCTATGAGAACACCCGAAGCAATTTCAAAGGGAAGAGCAGTAATCACCGAAGAGAGTATTAGAAAATGGTTTGAGAAACTTAAAGACTATCTCACTCAAAATCAAGCACTCGGTGTATTAGAAGACcctaaaagaattttaaatggTGATGAAACAAGTTTCATGCTTTGCCCTAAAACAGGAAAGGTAATAGCACCCCGAGGGTATAAAAATGTGTACCAAAtagtaaaaggaaaagaaaaaGAGGCAGTCACTGTTTTAGCATTTTTTTCCGCAATGGGTGATATTTTACCCCCATGTGTAGTTTTCCCGTACATCAGACCACCCAAAGATGTGGTAAATAGCATGCCAGACGATTGGTTTCTTGGTAAATCTGACACAGGTTGGATGAAAGCGGATATTTTCTATGATTATATAGCTAAATGCCTAACCAAATGGATCGAAGACAATGAAGTGAAGAAGCCGGTGCTTGTTTTCGTCGACGGTCACAAAACTCACATGACGATGAAACTCAGTCAATTTTGTCATGACAATAACATTATCTTGTACGCACTTCCACCTAATGCAACACATCTGATGCAACCAGCTGATGTAAGCGTTTTTAAACCACTAAAATCTGAATGGGCGACTACTGTCCATAACTGGTGTTCACAGCCTGAAAACGCTAATACTGTACTGACAAAATCTACGTTCTGCCCATTGCTTAATAAAGTATTAAGTAAAGAATCTCTAAAAGAGTCGATCAAAAATGGTTTTCGTAAGTGTGGCCTCTATCCGTTTGATCCAAGTGCTGTAGATTACTCTAAATGCGTGCAAAATATCTTAGAGAACAGAAAGAATAATATACCTGCTGCTAAGAAAATACCATCAAAGTCATTGAAGAAAAGAGACTTTGACATTGCatcaaaagttataaaacattTAGACGGAGATTTGACTGCAAGAGGCATTGATGTGAACATTCTACTGGAAATCGTGGAAAATGCAAAACTCACCCAAGGACTAAACGATTCAGTAAGAAGTGAAACTACAGAAAAAGAGGTTGAgaataatgaaacaaaaattacagTTGAAGAAAGAACAGAACTACGTGTGGCAGATAAAGACAAATGTTGTATGATTGAAGAAATTGAAAAACATGGAGTAGAAGAAGGATTCTATGTTATTATAACTGAAGACGAAAATGATTGTCTAAGAAAGACTGACATTGAAAGTGAGCTAACTCGGCcagaagaaaataataacattgaaataaattcaaCACAACCTGAGATACTAGATACTAGTAACTTAAATAACCTGACACTTGGAGATCTCACCTTTGATAATAACAATTTGTTGGACGATGACATTAATCTAGGATCATTTGAAGTTAATGACAGTTCAATATTAGTAcctataaataacaattatctGAATCAAGGAAATGAACTTCATGGTGATAAAATACAAACAGATTCTATTATTCAAGTTAAATCTCCAAAAGTATCACCTTTTGTACGAAAACATCTTATAATACCATCACCAATAAAGAAATCTACCACTCCTAGAGTCATGAACAGAATGGGCGCAATTTCTTCTAAAGAATGGAGACAATTTGAAATATCTAAAGAAGAagagaaacaaaaaaagaaagatgCTATTCAGGAAAGAAAGTTAcagaggcaaaaaaataaagaagaaaaggagaaacaaaaaaaggaaaaaaggaaaaaaacagCTCTAAATTCTACAAAACGTGAAGTGAAGAagactataaagaaaaaaaatgatgatTCAAATTCAGAATTGACAGTAAAATGCACAAAGAAACGGAAATTGGAAGATTTGAATGACATACCTGAAGAAGTAGAGAACACTGACTGTGATTTAGTggaaattaaacaaaacaaaattaaaattctcagtaatataattatatcatctGAAACTCCTGAAACAGAAACCCGTAAGGAGGATAAGCTTCTGCAAAAAAAGAAGACTGGCTATGATTTAGTGGAACTtaaacaaagtaaaattaaaattctcaatAATATACTTCCATCATCTAAAACTCCTGAAACAGAAACCTGTAAGGAAGATAAGCTActgcaaaaaattgtaaaacgACGAGAAACTTTCAGAAGTGAAAAAGAGcttgaaaactttttaaatactgATGTTAGTGAATAA
Protein Sequence
MSLSRPILQYPEEKLIQALDAIRNGMTIREASSNHGVPRGTLQDRLHLRVPEGPRRMGPESILNKYEEAEIATWLKDLAICGFPQKPDNLLNTVQQMMIEDGRPNPFINGRPGKKWMGSFFKRNESISMRTPEAISKGRAVITEESIRKWFEKLKDYLTQNQALGVLEDPKRILNGDETSFMLCPKTGKVIAPRGYKNVYQIVKGKEKEAVTVLAFFSAMGDILPPCVVFPYIRPPKDVVNSMPDDWFLGKSDTGWMKADIFYDYIAKCLTKWIEDNEVKKPVLVFVDGHKTHMTMKLSQFCHDNNIILYALPPNATHLMQPADVSVFKPLKSEWATTVHNWCSQPENANTVLTKSTFCPLLNKVLSKESLKESIKNGFRKCGLYPFDPSAVDYSKCVQNILENRKNNIPAAKKIPSKSLKKRDFDIASKVIKHLDGDLTARGIDVNILLEIVENAKLTQGLNDSVRSETTEKEVENNETKITVEERTELRVADKDKCCMIEEIEKHGVEEGFYVIITEDENDCLRKTDIESELTRPEENNNIEINSTQPEILDTSNLNNLTLGDLTFDNNNLLDDDINLGSFEVNDSSILVPINNNYLNQGNELHGDKIQTDSIIQVKSPKVSPFVRKHLIIPSPIKKSTTPRVMNRMGAISSKEWRQFEISKEEEKQKKKDAIQERKLQRQKNKEEKEKQKKEKRKKTALNSTKREVKKTIKKKNDDSNSELTVKCTKKRKLEDLNDIPEEVENTDCDLVEIKQNKIKILSNIIISSETPETETRKEDKLLQKKKTGYDLVELKQSKIKILNNILPSSKTPETETCKEDKLLQKIVKRRETFRSEKELENFLNTDVSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00908750;
90% Identity
iTF_01178360;
80% Identity
-