Pari015927.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- ttk_1
- Assembly
- GCA_963565745.1
- Location
- OY751437.1:12437153-12445856[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-15 1e-12 48.8 0.0 2 42 320 361 319 364 0.94
Sequence Information
- Coding Sequence
- ATGTCGCAACAGTACAGTCTCCGGTGGAACAACCACCAGCCAAACTTTATTTCAATGTTTGAAACTCTTCTTACCACAAAAACGTTAGTTGATGTAACTCTAGCAGCTGAGGGTCAACATTTAGTAGCTCACAAGGTTGTACTGTCTGCCTGCAGTACATATTTTCATTCACTCTTTGTTGACAATCCATCACATCATCCCATTGTGATTCTCAAAGATGTCACATTTGCTGATCTCCGTACAATGGTTGATTTCATGTATTACGGGGAAGTCAATGTTACAGAGGAACAGTTACCAcagGTGCTGGAAactgcaaaaatattaaaaatcaaagGGCTAACTGAAATGCCCGACTCCACATCTCTCACAAGATCACAAGGCTCTTCAGACTACAATTCGGCTGAGAACTCCTCAGAAACCCAAAGACAATCTGCATCACCATGTTCACCTTCTACAAGGCGCAAAAGGCGTCGGAAAAGTTCATCAGGCTCCATAAACAATGCCATTAATGAAAACATAAGAAATGAGGATACCGAACAAAATGTCAACCTCGTCCGAGAgttgccaccagtaaccttaAGCAGTTTACCTCAGCAAAAACGGAGAGAATTGGAAGATAGAATAGATAACAATCAACAGACTGGAGAGCCAGCTAACATAAATATAGATCAATTAAACTTGGATTCAAATGCTGGTGTAATACCCCAGGGACAATGGAGTATGCTGGAGCATACATACCCCCGGTATTCGAACCCCTGCCTCGGGGGCGGCGGGCTGCCACCAGACCAGGGCATGTACCTAAACAACGTAATTACCACCGATGCTGACCTTAATAACTACGGCCAGCTGGGCATCGTAGGCCCGGCACCCGGCCCCAGTTGCGTCGCCGAATCGCCGGCCGTGCCGTCTATGCAGTCAAATCCACCGAAAAGACGCCGCACCACCAATCCGCAGGCGGAAGAAAACTTTCAACGAGCGCTCGAGGCGGTCCGATTCGGCGGGATCGGCTTCTGTAAAGCGGCTAAATTATTCGGGGTGAACAATAGGACTCTCTGGTTAGAGTACAAAAAGAAGGGGTACCCGAATAACAGGCCTAGTATTAAAAGCAGGATAAAACGTGAGCACGTGACGCCCCCACCGGAGCACAAGGACGAGCCGCATCATCAGGACCAGCAGATGGCGCTAATATGTCCCTCGCATCCCGTGCCCGTGGGCTACATTGATCCCAGGCCAGTGGAGTTTCCGTTGCCGGTCAACAACTccctaaatttaaatataaatgggGTGAATTTTCCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFETLLTTKTLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFVDNPSHHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGSSDYNSAENSSETQRQSASPCSPSTRRKRRRKSSSGSINNAINENIRNEDTEQNVNLVRELPPVTLSSLPQQKRRELEDRIDNNQQTGEPANINIDQLNLDSNAGVIPQGQWSMLEHTYPRYSNPCLGGGGLPPDQGMYLNNVITTDADLNNYGQLGIVGPAPGPSCVAESPAVPSMQSNPPKRRRTTNPQAEENFQRALEAVRFGGIGFCKAAKLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPEHKDEPHHQDQQMALICPSHPVPVGYIDPRPVEFPLPVNNSLNLNINGVNFPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212354;
- 90% Identity
- iTF_00744530;
- 80% Identity
- iTF_01178753;