Basic Information

Insect: Boloria euphrosyne
Gene Symbol: ttk
Assembly: GCA_951802675.2
Location: OX637870.1:9537255-9543133[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-15 8.6e-13 48.6 0.0 2 42 323 364 322 367 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-15	8.6e-13	48.6	0.0	2	42	323	364	322	367	0.94

Sequence Information

Coding Sequence: atGTCTCAACAATATAGCTTGCGATGGAATAACCATCAGCCTAACTTTATATCTATGTTTGGAACATTGCTGGCTACAAAAAATTTAGTTGATGTCACTCTTGCCGCTGAAGGTCAACATCTAGTTGCACATAAAGTGGTGTTATCAGCCTGCAGCACGTACTTCCATtcattGTTCGTTGATAATCCATCACATCATCCAATAGTAATATTGAAGGATGTCACATTTAATGATTTACGAACTATGGTTGATTTTATGTACTATGGAGAAGTTAATGTCACTGAAGAACAGTTACCACAGGTACTGGAAACagcaaaaatattgaaaatcaaAGGCCTAACAGAAATGCCAGACTCAACATCTTTGACCAGGTCCCAAGGGTCATCAGCAGATTTACCTACTGCAGACAATTCAAATGAAACACTAAGACCTTTAATTTCTACACCATCTCCTATTTTGAAACCCAAACGACGTAGAATGAGTTCAACGGGTTCAGTTGGGAATTTAGCGACAGACGACAACAGGAGTAATGATTGCGTTCAAAATTTGGAAATGATGCGTGAAGCGATAACTCTGAGCAGTGTACCACAACAGAAACGAAGGGAAATAGACGAACGGATAGATAACTCACAACAGGCTGGTGAACCATCAAACATCAATATAGATCAACTTGCGATGGACGCAAATTCTGCTGTTGGCATATCACAAGGCCAATGGAGTATGTTGGAGCATACATACCCTCGATATACTAACGCCTGTCTCGGCGGTGGGGGCCTGCAGCCGGACCAGGGGATGTATTTGAATAATGTGATGAATCAGCACGGAGAGTCGGAGATGAATAACTATGGGCAGGTGCTGGGCATGTCGGGCCCCGCGCCCGGGCCCAGCTGCGTGTCCGACTCGCAAGCGATACAGCCCATCAACCAGATGCAGCAAAAGCGTCGGCGCACAACCAACCCCCAAGCCGAGGAGAACTTCCAGAGAGCCCTCGAGGCAGTGCGCTTCGGCGGCATAGGATTCTGTAAAGCGGCCCGCATGTTCGGCGTGAACAACAGGACTCTATGGCTCGAGTACAAGAAGAAGGGCTACCCGAACAACCGGCCGAGCATCAAGAGTAGAATAAAGCGCGAGCACGTGACCCCGCCGCCGAAGGAGGAGCCGCCCCAGCAGGACCCGCAGATGGCGCTGCTGTGCCCGCCGCACCCCGTGTCCGTGGGGTTCATCGACCCGCGGCCCGTCGACTTCCCCCTGCAGGTGAACAACTCGCCCCTGAACATCATCAACGGCGTCAACTTCCCGATGCAATAG
Protein Sequence: MSQQYSLRWNNHQPNFISMFGTLLATKNLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFVDNPSHHPIVILKDVTFNDLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGSSADLPTADNSNETLRPLISTPSPILKPKRRRMSSTGSVGNLATDDNRSNDCVQNLEMMREAITLSSVPQQKRREIDERIDNSQQAGEPSNINIDQLAMDANSAVGISQGQWSMLEHTYPRYTNACLGGGGLQPDQGMYLNNVMNQHGESEMNNYGQVLGMSGPAPGPSCVSDSQAIQPINQMQQKRRRTTNPQAEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPKEEPPQQDPQMALLCPPHPVSVGFIDPRPVDFPLQVNNSPLNIINGVNFPMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247971; iTF_00248229; iTF_00159751; iTF_00722964; iTF_00723260; iTF_00247103; iTF_00159968; iTF_00212672; iTF_00247328; iTF_00213662; iTF_00213349; iTF_00953666; iTF_00953441; iTF_01017666; iTF_01018692; iTF_01018505; iTF_01017843; iTF_00925861; iTF_00687817; iTF_00925652; iTF_00786685; iTF_00687967; iTF_00744530; iTF_00744865; iTF_00261973; iTF_00261769; iTF_00255738; iTF_00256067; iTF_01178331; iTF_01178753; iTF_00642262; iTF_00642478; iTF_00896698; iTF_00896998; iTF_00621149; iTF_00621337;
90% Identity: iTF_00213662;
80% Identity: iTF_00212672;