Psol001398.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- pnr_2
- Assembly
- GCA_009761765.1
- Location
- chr1:37788949-37794511[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 4.4e-15 54.4 3.2 1 34 113 145 113 147 0.97 2 2 3.2e-19 7.6e-16 56.8 6.2 1 35 167 200 167 201 0.98
Sequence Information
- Coding Sequence
- ATGAATTATAAGGAAGTAAATGAGTCTCAATACCACCTACCCCCTCCTGCTCATATTGCCCATAGTTTTAGAAATCACCACCAACAACCCGTTTACGTTCCTTGTAATCGACCCACGGCGGCTATGTTCAGTCCTCAGTATACAAATACATCTCATAATACAAATTGGCACGGCGCTACACATCCTTTGTCCGCCGGAGCTCATCAAAATACAACAAATCCTTTAGCAAGTTCCTTTTATACGGCACAAAATACGATGTTGTGGCCAAATCCGGCCTATCAAACCACTTCACCTTATGATGGAGCGATGGAATTCCAATTTGGCGAAGGTCGAGAATGTGTGAATTGCGGCGCAATTTCGACTCCGTTATGGAGACGCGACGGTACCGGTCATTATTTATGTAACGCTTGCGGACTTTATCATAAAATGAATGGCATGAATAGACCTCTGGTTAAACCTTCGAAAAGAATGACTTCGTCACGAAGGTTAGGCCTATGTTGTACAAACTGTGGCACGCGAAATACTACTTTATGGAGGAGAAATAATGAAGGAGAGCCCGTATGCAACGCGTGCGGCTTATACTTCAAATTACATGGGGTCAATCGGCCGTTGACGATGCGCAAAGATGGCATTCAAACGAGAAAACGTAAACCTAAAAAACCGCCTACAATATCTTCTAGCAGCAACCAGCATAGCGTTTTAGCCAATAGTATTACCCCATCACAAGAATCTCTGAAGAATTGTGACGATGAAAGAAACTACCTAAATCTACTAACTGGCGCTGCCTGCGTGAAAAGTGAACCTTACCCGGATAATATTTCAGTATCAAATAACAATCATTACTTACCTCATAATTTTACTACAGCTACGCATAATCCGCTGAATTTTCCGTTCCCACCGACAGGAACATCTGATATTTATCATCGTCATTTTATATCTAATCATAGTAGCTCAAAAATATTGTCCCCAACATAG
- Protein Sequence
- MNYKEVNESQYHLPPPAHIAHSFRNHHQQPVYVPCNRPTAAMFSPQYTNTSHNTNWHGATHPLSAGAHQNTTNPLASSFYTAQNTMLWPNPAYQTTSPYDGAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPSKRMTSSRRLGLCCTNCGTRNTTLWRRNNEGEPVCNACGLYFKLHGVNRPLTMRKDGIQTRKRKPKKPPTISSSSNQHSVLANSITPSQESLKNCDDERNYLNLLTGAACVKSEPYPDNISVSNNNHYLPHNFTTATHNPLNFPFPPTGTSDIYHRHFISNHSSSKILSPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150896; iTF_00725956; iTF_01264069; iTF_01472839; iTF_01263022; iTF_00194845;
- 90% Identity
- -
- 80% Identity
- -