Pmar015851.1
Basic Information
- Insect
- Paracoccus marginatus
- Gene Symbol
- pnr
- Assembly
- GCA_900065295.1
- Location
- FIZT01056899.1:8631-11309[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-18 8e-15 54.4 3.2 1 34 114 146 114 148 0.97 2 2 1.9e-19 6.6e-16 57.8 5.8 1 35 168 201 168 202 0.98
Sequence Information
- Coding Sequence
- ATGTTTTCTTGTTCCGTGCGTACGGCGATTACACCAAATTACTCTGCTACTCTTCCGAACGATAGCTTCAGGAATCACCACCAACAACCCGTTTACGTTCCTTGTAACCGGCCGCCTACAACCAGCATGTTCGGTCCTCAGTACACAAATTCTTCTCACAATACGAATTGGCACGGCGCTGCACATCCTCTAAGTGCAACGGCCCATCAAAATACATCGAATCCTTTAGCAAGTTCCTTTTATTCGGCGCAGAATACGATGTTGTGGCCAAATCCAGCTTATCAGACGTCGTCTCCGTACGATGGAGCAATGGAGTTTCAATTCGGAGAAGGAAGAGAGTGCGTTAACTGCGGAGCGATCTCAACACCTTTatggcgacgcgacggtacCGGTCATTATTTGTGCAATGCTTGTGGACTTTACCATAAAATGAATGGTATGAATAGACCTTTAGTGAAACCTTCAAAACGAATGACCTCATCTAGAAGACTAGGCCTTTGTTGCACCAACTGCGGCACACGAAATACGACTTTATGGAGACGAAACAACGACGGAGAGCCTGTATGCAACGCTTGCGGTTtatatttcaaattacacGGCGTCAATCGTCCACTGACAATGCGCAAAGATGGTATCCAAACGAGAAAACGTAAACCTAAGAAACCGCCTACAATATCATCGAGTGGCAACCAACATAACGCCTTGATCAATAATCTTTCTACTTCGCAAGaATCTCTCAAAAATAGCTGTGATGATGAAAGAGGCTACCTCAATTTATTAACGAGTGCAACTCACGTTAAGAGTGAACCGTATTCAGATAGTATTCCAGTATCCAACAGTAATCACTATTTACCTCATAATTTTGCTGCAGCAACGCACAATccgttaaattttccatttccgcCGACCGGTGCCACCGAAATTTACCATCGTCATTTTACATCTAATCACAGTAGTTCTAAAATACTGTCTCCTACTTAG
- Protein Sequence
- MFSCSVRTAITPNYSATLPNDSFRNHHQQPVYVPCNRPPTTSMFGPQYTNSSHNTNWHGAAHPLSATAHQNTSNPLASSFYSAQNTMLWPNPAYQTSSPYDGAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPSKRMTSSRRLGLCCTNCGTRNTTLWRRNNDGEPVCNACGLYFKLHGVNRPLTMRKDGIQTRKRKPKKPPTISSSGNQHNALINNLSTSQESLKNSCDDERGYLNLLTSATHVKSEPYSDSIPVSNSNHYLPHNFAAATHNPLNFPFPPTGATEIYHRHFTSNHSSSKILSPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178074;
- 90% Identity
- iTF_01264069;
- 80% Identity
- -