Psol001597.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- dmd-4
- Assembly
- GCA_009761765.1
- Location
- chr1:41058702-41060347[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-26 3.5e-22 77.4 12.1 1 47 20 66 20 66 0.99 2 2 0.041 1.6e+02 1.7 1.1 28 38 384 394 383 397 0.87
Sequence Information
- Coding Sequence
- ATGGAAGATAATGAAAAATCACAATCATCTGATTCGGATAAACAATACATTATTACACGTCGGCCTAAATGCGCTCGTTGTAGAAATCATGGAATGATTTCCTGGCTGAAGGGGCATAAACGACAGTGCAGATTCAAATCGTGCATATGTGCAAAATGCAATTTAATTGCTGAAAGGCAGAGGGTGATGGCAGCCCAAGTAGCCTTAAAACGTCAACAAGCTGCAGAAGACGCAATTGCGATAGGTTTAGCTGCAGTAGCTACAGGAAATCAGTATGGATACCTACCTCCAGGACCAATATTTGGTATGAAAATAACTGATCCTCAAGATCAACAGAACTCATTACACAGCGCGGCAAAAAATAAACCGACGAAGGAAGTAGCTATTGAAAACGATTTATCAAATGAACCTGATAAAGAGGAAGTTATCAACCAAGAATCATCTGTGGAAGAAGTACAAAACAGTCCTGCTGAAAATCAAGAATTAGCAAGTTGCGGACACGTGAACGAAGTTCCTTCAACAGCGTTGGAGATGTTATCGAAATTATTTCCAGAGAAAAAAAAATCCGTTTTGGAATTGGTGTTACGACGATGCGGAGATGATTTATTGAAAGCTATCGAACAATGTAACCCTTTACGAGAAGGACCCAGTTATTTTAATCATGAATGTGGTAAGAAGCATGGAAAAGGAAATGCAGATAAATTAAAAAATTGCCAAATTGATAAACCAGAATATCATTTTTTGAATAGAATTGTCAAGTTGGGCGCTGATACAAATTTCATTCCTGGTAAATCAGCATTTCGTCCTTTCATACCTGAAGAACCACCAGCTGCACATCAGAATACTCGCAGGGATGAGTTATTGCCTAATTTTCGCCTCAGTTATGGAAATACTCATGGATTACCGGAAGCCCATCAGAATAATAGAAAAGAAGGCCAAGAAATTACGTCCGTATTAAATTACAACAATAGATTATTGTCTGGAATGATCACTTCGAGTATTCCACAACATGCCACTTTATTACAATTACCTGCTAGTCATCATTTGTATTCGGGTGCTGCTTCAGTCCTTTCTTACGAGCGCTCTCCGTTTTATCAACCTATAAACGGTCCTTTACATTCTATTCTAGTCCAGCCTAGACCAGATGGAAGTTGTCGTTGCGTGGAATGCATCACTGTCACCGCAGATTCCACTAATTAG
- Protein Sequence
- MEDNEKSQSSDSDKQYIITRRPKCARCRNHGMISWLKGHKRQCRFKSCICAKCNLIAERQRVMAAQVALKRQQAAEDAIAIGLAAVATGNQYGYLPPGPIFGMKITDPQDQQNSLHSAAKNKPTKEVAIENDLSNEPDKEEVINQESSVEEVQNSPAENQELASCGHVNEVPSTALEMLSKLFPEKKKSVLELVLRRCGDDLLKAIEQCNPLREGPSYFNHECGKKHGKGNADKLKNCQIDKPEYHFLNRIVKLGADTNFIPGKSAFRPFIPEEPPAAHQNTRRDELLPNFRLSYGNTHGLPEAHQNNRKEGQEITSVLNYNNRLLSGMITSSIPQHATLLQLPASHHLYSGAASVLSYERSPFYQPINGPLHSILVQPRPDGSCRCVECITVTADSTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -