Psol005830.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- Bgb_1
- Assembly
- GCA_009761765.1
- Location
- chr3:35896606-35897984[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-25 3.4e-21 75.0 2.0 1 42 35 76 35 77 0.98 2 2 1.5e-34 1.8e-30 105.2 0.1 93 162 75 144 75 149 0.96
Sequence Information
- Coding Sequence
- ATGTTATCGATGAGCGAAGCGAGTTCGTTACCAGGAGGCGTTGGAATGTTGGGACCATTCGACAGTCTCTACGAACAACCGAAGCCTAGATTCATTTTCAAAATGCCCAGAGTTGTGCCCGATCAAAAACATAAATTTGAGACAGACGAGTTATTCAGACGCCTCAGTCGCGAAAGCGAGGTGAGATATACAGGATATCGAGATCGTCCGCAAGAAGAACGTCAAGTTCATTTGCGTTCACATTTTATCATGAACGGTGTCTGTGTGTGTTGGCGTGGCTGGATAGATCTCGATAGACTGGATGGCGTAGGTTGTTTAGAATTCGACGAAGAAAGAGCCGCAGTTGAAGATGCTTTATTACGAGATCAAATCGAAAGATATAATCAGAGACTTCGTGAATTCGAAGAACGGCAGAGAACTTACCGTGGTGGTGCAATGTCTTCTCATCCAGAACGTACTGGAAATAATGGCAATGGTGGAAATGGTAGTGGAGGCGGAAATGGACAACCTTTAGAGGTAAATTGA
- Protein Sequence
- MLSMSEASSLPGGVGMLGPFDSLYEQPKPRFIFKMPRVVPDQKHKFETDELFRRLSRESEVRYTGYRDRPQEERQVHLRSHFIMNGVCVCWRGWIDLDRLDGVGCLEFDEERAAVEDALLRDQIERYNQRLREFEERQRTYRGGAMSSHPERTGNNGNGGNGSGGGNGQPLEVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -