Basic Information

Insect: Phasia obesa
Gene Symbol: L
Assembly: GCA_949628195.1
Location: OX451219.1:41869422-41883782[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.1e-06 0.0012 20.7 1.7 1 23 209 231 209 231 0.98

2 18 0.65 98 5.3 5.7 1 23 237 259 237 259 0.98

3 18 3.5e-07 5.3e-05 25.0 3.1 1 23 265 287 265 287 0.99

4 18 1.6e-05 0.0025 19.8 0.3 1 23 293 315 293 315 0.98

5 18 4 6.1e+02 2.8 0.8 2 23 380 403 379 403 0.85

6 18 0.0037 0.55 12.4 0.3 2 23 430 452 429 452 0.96

7 18 0.057 8.6 8.6 0.4 1 23 552 574 552 574 0.97

8 18 0.47 71 5.7 2.0 2 23 582 603 581 603 0.95

9 18 0.0026 0.39 12.8 0.3 1 23 611 635 611 635 0.92

10 18 3.2 4.8e+02 3.1 0.0 2 19 641 658 640 660 0.92

11 18 0.0021 0.32 13.1 2.9 1 23 732 754 732 755 0.96

12 18 4.6 7e+02 2.6 0.9 1 23 919 943 919 943 0.89

13 18 0.0013 0.2 13.8 4.9 2 23 952 974 951 974 0.97

14 18 0.18 27 7.1 0.1 1 23 980 1002 980 1002 0.92

15 18 0.0056 0.85 11.8 0.5 2 23 1010 1031 1010 1031 0.96

16 18 0.91 1.4e+02 4.8 0.9 2 23 1121 1142 1121 1142 0.94

17 18 0.0026 0.4 12.8 0.1 1 23 1152 1174 1152 1174 0.97

18 18 0.015 2.3 10.4 0.7 1 23 1181 1203 1181 1203 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.1e-06	0.0012	20.7	1.7	1	23	209	231	209	231	0.98
2	18	0.65	98	5.3	5.7	1	23	237	259	237	259	0.98
3	18	3.5e-07	5.3e-05	25.0	3.1	1	23	265	287	265	287	0.99
4	18	1.6e-05	0.0025	19.8	0.3	1	23	293	315	293	315	0.98
5	18	4	6.1e+02	2.8	0.8	2	23	380	403	379	403	0.85
6	18	0.0037	0.55	12.4	0.3	2	23	430	452	429	452	0.96
7	18	0.057	8.6	8.6	0.4	1	23	552	574	552	574	0.97
8	18	0.47	71	5.7	2.0	2	23	582	603	581	603	0.95
9	18	0.0026	0.39	12.8	0.3	1	23	611	635	611	635	0.92
10	18	3.2	4.8e+02	3.1	0.0	2	19	641	658	640	660	0.92
11	18	0.0021	0.32	13.1	2.9	1	23	732	754	732	755	0.96
12	18	4.6	7e+02	2.6	0.9	1	23	919	943	919	943	0.89
13	18	0.0013	0.2	13.8	4.9	2	23	952	974	951	974	0.97
14	18	0.18	27	7.1	0.1	1	23	980	1002	980	1002	0.92
15	18	0.0056	0.85	11.8	0.5	2	23	1010	1031	1010	1031	0.96
16	18	0.91	1.4e+02	4.8	0.9	2	23	1121	1142	1121	1142	0.94
17	18	0.0026	0.4	12.8	0.1	1	23	1152	1174	1152	1174	0.97
18	18	0.015	2.3	10.4	0.7	1	23	1181	1203	1181	1203	0.95

Sequence Information

Coding Sequence: atgTACTCTACGCATACTTCGTCAAGTTATTCACCTTCTATATCAGATGGTACCATCACACCAAATTCtttacatcatcatcatcatcatcaccatcagcATTTAACTGTGCCACCACACTTATCATTCCCCAATTCGGCTGCTTATGAAGAAGATACATCGATGGTCCTGCAGACAAAACGTCTGCAAAGGCAAAAAACTAATGGCATTTTGGATGGCGCTGACTTCGAAGATAATGCCAATGACAACGACCACAACAACGAAAGGATTCACAAAAATGATACAAAATTATGCGAAGGCAGCAACACAATTGTTGCAGACAATAACACAACCACAAATATTCCTGAAAGTGAAGAAGAACACCGTCAACAGCAAACACAGCTTCATCATCATCAACTAAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATGCCTTCAAAATTACGTAAAATCGATAGGGATTCAACGGTTGGTAATGGTGCCAGTGCCGTCGGTGCTGCTTCTGCTGATGCTGTCAGTGTTGGTGTAACAGCTAATGCAGTCAAGTTCGATAAGTTGACAGGCGATGGCATTAAAAGTGGTAACAATGCTGTTAGTGCCGACGGATCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTtggttatttgaaaaaacatgAGCAGagtCATGCTGAACACTTGCCTTTTAAATGCGAGTACTGCGCTCGGCTGTTTAAGCATAAACGCTCTCGTGACCGACATACTAAATTACACACAGGGGATCGTCGCTATCGCTGCCCTCATTGCGAGGCTGCATTCTCAAGaagTGATCACTTAAAGATCCATATGAAAACCCATGATAACCAAAAACCATTCCAATGTACTATTTGTAATCGCGGCTACAATACAGCTGCAGCTCTTACATCCCATatgcaaaatcataaaaaacaagCAGCCCTTTTAGCTGCTGGTGGTAATCCCCAAGCTATTAATTATAGTCCACGTTCTACCGGTTCTGCTTCTAGTAATGGAAGCTTACAGAAAAGACGTTATGGTTTGGCTGGAGCACCGGATCAAAGTCCTAGTCGCATTGATTTCCCAAAGAGGGGTCGTTCATCATCATCAAATATGCTTAAGTGTACATTTTGTTCAAAGTCTGACTTTACAGCAGTAGAACAGTTGAATAATCATCTTCAAACTCAACACGAAAAGGAACTGGCGCACTCCATGACACCACCCTCTTCAAACAACCACCAACCAGTGGAAAACCATACATTTCAACTATCGTGTGAATACTGCACTATGAAATTCCCTAACATCGCTGCTATGTTTCAACACATGCGTTCAACTCATTTGGATCGATTGACTAGTCCCAATTCATACTTTGAACATTTTAATCGTTTAGCTGCCTCAGGTACTTTTAGTCCTCGTCTCTTAACAGGACCACCAGTAAGAAGTACGGCAAATGCAGAAGAGAacataaaagaagaaaacaatttattaagtcCTAAATCAGCAGAGACGTTGAATCGACAAAGTGAAGATGAACCCACCGATCTGAGTCAAAATAATCGTAGATCGGTGACCCCTACGAATACTTCTCAGAATTCTCCCCAGGAACATTTAACTGCCACCGAAAAACCTGGTTTATTCTTTTGTAACCAATGCAACGCTGGCTTACCCGACTTTGAAGCATTTCGCAATCATCTAAAGACCCATATAGCTCAGGGGGTCAACTTGGTATGTCATCATTGCGGTTTGCTATTAAGAGAACACGCTGAATACGAGAGACATGTCATATCACATTTTCTTATAACAAACTCTGAGTACAACTGTTCGGGAAGTTGCCAAAAGTCTTTTGGAAAGCCGGAAGAACTACAAAAACATCTGTTGGACCAGCACGCCATAACAATGATTAAATGTGGCCTGTGCAGTGAAATTTTCGAATCGAAAGTAGCCATACAAGTACATTTTGCTTGTACCCACTCGGCGGAAACGAAGATCCTAAGATGTTCGGCCTGTATGGATGTATTTAGAACGGAAACCGATTTTAACTTGCATGTTAAATCACGTCATCAAGCTATTAATAATAATCCTGCTCCGGTAAATTCCTTGCAGTGCATGTTTTGTCGTACCGTATGTTCCTCTGATCTAGAAATGCAGTTCCATTTAGCCGCACATGCCAGACAATTTCGTTGTCCTTCGTGCCCAGAAACCTTTcatgttgaatttttacttGATCGCCATATGCAAACACATCATGCTGGCTTGGAGCGTCCACCACCTCCGCCTCCACCACAAACTATGGCAGAAGAACACACTTCACCCATTCCTAATCCAAATGCTATATCTCCAATGAACTCTTTGTATGTAAATGCTCTATTTGGAAAGTCACCATTAATGCCACTGGcaccacaaaataataacaatagcaTTTTAGATTACAACATGGCATTTGCCTCCCATCTTAATAAGGGGCTGTTTCCTAATACCAATCCCAACAAGTTCTACAATCCACTGCAAATTGACACGAACGCCATTAAACACTCAGCTTTGATGTATGGTTTGTCGCAGAGATATTTTGATACCAATCGCACAGTTATGGAAATgtatcagcaacaacaacaacaacatcaggataataataaaacaacaggaaCTTATTTTGTAAGTCCCAAACAGCCAACATCAGGAGGTCACGATGTCCATCATACTAGAGACTTGCCTGCCTCCCCAATAAATAGCTCTGGCTTTAGTTGTGGCATTTGTGAACGAAATGATTTTCGCACTGAATCTGAAGTCCACTCTCATCGCAAGATTGTACATAATCTTAAAACTGGAGTCAGTTTAAAATGTGCCTACTGTACGGGCAATTTTAAATCACGCAGTGAGTTGGAACACCACATGAAAACTTGTCATAACTCTACCGGTAAACACAAGTGTTTGATATGTGATGAAATCTTTCCATCTCCTGCCATTTTGGCGGAGCACAAATTGCAACATTCCAAGGTGGGACAATCCGGAAGATGTTCTCATTGTTCTAAAGCATTACCCGACGCCAGTGCCTTCAAGGCCCATTTGTCCGAGCACAATACAGAAGGTCAAGTGCCAGTGCAATGTATATGTTGCCGTCAATCATTGCACTCGGAATTTGAGATTGGCCTGCATGCAAAattCCATGTTATAAACTCCAATGTTCAAGAAAATGTTTGTGCTCTTTGTCTGGAACCCATAAATAATTCACCTACAGAGGCCAAAGTTTGTGAGAAATGCTGTCGCAAACACAAtcttaattcaaaattaaagcaaCGTGAACACTTTGAACGTCCAGCCGAACTAAGGCAATTCAATGAAAATCGTTGTAATCTTTGCAAAATGATACTACCACATTCTCAAAAACTTCAAGAGCATTTGGTCGAACATACATTTGCTGGTTGCGAGGACCGTGGTTTCAATTGCTATATATGTTCGGCCGTGTTTACTGCCTCCAGTGGGTTACTGAATCACATGCTCGAACATGGTATCAACTCTAAGCCCTACGATTGTAATTTATGtccagaaaaattttacttccgCGCTGAGTTGGATCATCATCTAATTGATCACGACGTACGAGAATCAccagcagtaattaaaaatgaGCAGGagaaattgcccaaaaaagagGAAGCTTTAAATAGTATGAAATCGGAGAAACCCGTCGGAGGGTTTAATGAAGTAAAACAGGAACTTATCGAACATGAACATATTTCCAACAATGCTGAAGACGATGAGTACATTGAAGTAGAGAATGTAAATGAGAATAATAACAATACTCAGTTATCAGTTGATGATACACAGTCAGAAAAAATAGAAGAAGCTAAAGAGAAATCGAATGAACATGAAAGAGTTAAGAAGGCATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHHHHHHHHQHLTVPPHLSFPNSAAYEEDTSMVLQTKRLQRQKTNGILDGADFEDNANDNDHNNERIHKNDTKLCEGSNTIVADNNTTTNIPESEEEHRQQQTQLHHHQLKRHGRHHRYAEHALRMPSKLRKIDRDSTVGNGASAVGAASADAVSVGVTANAVKFDKLTGDGIKSGNNAVSADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQAINYSPRSTGSASSNGSLQKRRYGLAGAPDQSPSRIDFPKRGRSSSSNMLKCTFCSKSDFTAVEQLNNHLQTQHEKELAHSMTPPSSNNHQPVENHTFQLSCEYCTMKFPNIAAMFQHMRSTHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPVRSTANAEENIKEENNLLSPKSAETLNRQSEDEPTDLSQNNRRSVTPTNTSQNSPQEHLTATEKPGLFFCNQCNAGLPDFEAFRNHLKTHIAQGVNLVCHHCGLLLREHAEYERHVISHFLITNSEYNCSGSCQKSFGKPEELQKHLLDQHAITMIKCGLCSEIFESKVAIQVHFACTHSAETKILRCSACMDVFRTETDFNLHVKSRHQAINNNPAPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHAGLERPPPPPPPQTMAEEHTSPIPNPNAISPMNSLYVNALFGKSPLMPLAPQNNNNSILDYNMAFASHLNKGLFPNTNPNKFYNPLQIDTNAIKHSALMYGLSQRYFDTNRTVMEMYQQQQQQHQDNNKTTGTYFVSPKQPTSGGHDVHHTRDLPASPINSSGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCTGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALPDASAFKAHLSEHNTEGQVPVQCICCRQSLHSEFEIGLHAKFHVINSNVQENVCALCLEPINNSPTEAKVCEKCCRKHNLNSKLKQREHFERPAELRQFNENRCNLCKMILPHSQKLQEHLVEHTFAGCEDRGFNCYICSAVFTASSGLLNHMLEHGINSKPYDCNLCPEKFYFRAELDHHLIDHDVRESPAVIKNEQEKLPKKEEALNSMKSEKPVGGFNEVKQELIEHEHISNNAEDDEYIEVENVNENNNNTQLSVDDTQSEKIEEAKEKSNEHERVKKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: -
80% Identity: -