Pobe039041.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
RREB1
Assembly
GCA_949628195.1
Location
OX451218.1:107799382-107805492[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.028 4.3 9.6 1.7 1 21 230 250 230 252 0.95
2 14 0.00048 0.073 15.2 0.2 1 23 262 284 262 284 0.98
3 14 3.3e-05 0.0051 18.8 7.5 1 23 290 312 290 312 0.98
4 14 1.7 2.5e+02 4.0 0.1 1 23 545 569 545 569 0.86
5 14 7.5 1.1e+03 2.0 1.8 2 20 575 593 575 594 0.93
6 14 0.028 4.2 9.6 0.0 1 23 734 756 734 756 0.97
7 14 1.6e-05 0.0025 19.8 1.2 1 23 766 788 766 788 0.99
8 14 0.0012 0.18 13.9 2.0 1 23 794 817 794 817 0.97
9 14 0.0042 0.64 12.2 2.0 1 23 1167 1190 1167 1190 0.95
10 14 0.00026 0.039 16.0 1.0 3 23 1528 1548 1526 1548 0.97
11 14 0.21 31 6.9 6.3 1 23 1554 1577 1554 1577 0.97
12 14 9.2 1.4e+03 1.7 4.1 1 23 1678 1701 1678 1701 0.92
13 14 0.12 18 7.6 1.1 3 23 1756 1776 1755 1776 0.91
14 14 0.0014 0.22 13.7 5.7 1 23 1782 1804 1782 1804 0.99

Sequence Information

Coding Sequence
atgttAGTCGCCACAAATGCCCAACAAACTGCCCAAAATAGTCCTAAAACAACCAGAGCGAAAACGCCAATAAAAATGGAAAGAAGAGAATCCACCTCTTCCTACTCATCATTGGAAGATTTGGAACGTgaaggtaaaaaattaaatgctatCACCTCCACGCCGTTGATGACAAATGATGCTGCAATTCCTGGCAATGTTAGTgtgaaaacaaatgaaaaatcgaTGCAACAGACAGATACAATTGACCAGCAACATAGTCTGCATCAGCGTATGCATGAATCAGATGAGGCTAATGATTACGATGAGGATGAATCAGCTGACGAGAAATCTACACAATCTCGCCAACAGTTGCTCTACAAGCGTCGCCTAAGTAGTCGCAGTCTAACAGATAAAACGACCAGTTATCTAGTTGAGTACAATGTCAATAATCCCAGTTCTTTGCGTAAAAAATTTCGCTCCAACCGTTTTGTACTTAACAACGGCGATGAGTCGGGTTTCGTTGATACGAGTAACAATAGCCATTTGATGAATTCAACGCCCTCAACGTTGCCGGTCACAGCGACAAATGAAACGAACcctaataataattgtaaatcAAATAGTTCTTCGGATACCTCATCACCGCCCCAAAGCAATGGAAATTCTAGTCCCGAATCAGGTATCGGAGAGCGTGAGGATATGAAATATATGTGTCCCATCTGTGATGCAGTCTCACAAACGGCCCATCAATTTACCAATCATATACGTTGTCACAATTACGCTTCGGGTCATACGGAAAACTTCACCTGCCGCATTTGCTCTAAgGTGCTGTCATCTGCCTCCTCATTGGATCGCCATGTTCTAGTTCATACGGGAGAGCGACcatttaattgtaaatattgtCATCTTACATTTACCACCAACGGGAATATGCATCGCCATATGCGTACCCATAAGCAGCATCAACATACACATCATAGACGTAACTCGAATGGAACAAAGTTTAccccaaacaacaacaacagcaacaataacaactatAATAATGCTAACAATAACAGCACAACACCAACAACGATAACGACATCTACATCTACAACGACTACAACACCAGCTTTCAGTAAAGCAGCGTTAAGCAATGGACAATTAAGTGAAGGCGTTAAATTATCAACAATAACAGACACAACGCcgtcaacaacaaaaatatgtacGCCATCATCGCCagtagcagcaacaacaacaacaacaacaaaaataacccCAACAGTGATTGCTGCTGACAATTATTATAATCAAAAGGCAGTGGTAGGTGATAATGGGGAACGATTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCAGGTCATGtttacagcagcaacaacaacaataatgacaaacaaaataacaacaataataataataataataatgattttaaaattaataataataactataaaCGCAAGCATAGTGATGATCAGCCGCCACAAGTCGTACTGGAATCCAAAGAAAATAACCACAACCTTTTAAAGCGTCGTTTAAGACCTGACAGTTTACGATCACCCCCCACCACAGATAACAATAATGATGTGGTTAATAATACAGCGAATGAATTGTTCATCTGCCCCGTTTGTAACGAGAGTGATTTTGCTAATAATGCGGCACTTGATCATCACATCGATAGTGAACATCCAAAAATCCCTGCCAAGTGTAAAAATTGTGGTGTCATCTATCTTACCCAACATCAGTTCAACATACATGTCTGTCCGGCCGATATTAAGGGCTCGTTAAATTTATCGCTAAAACAGCGTCGACTAAGTGAAAGTTCTAACCATCATGCGCAAGAGGATCAGGACGAGCGGGAAGAGAATACAAGACAGAGACATGAGTTATTTCATCACTTTAAAAATGTCATGGCGCATAGTAATTCACCTTCATCACATTTTAATCAAGATCTGACAGAAGATGACATCAAGTCGGAACCATCGGCACATGATTCTAAAGATTTGGCTGATATTCAATCAATACTAAATATGACAGCTTCTTCGAGTAACTCAAATTTACTCAGGAACTTTGAACAGTCGGTGAATACACCCTCCTCCCAATATAGCTACGACAGGGATGAAGAAGAAGCTCAAGATGCTTTTACCTCGGAATTTCGTAAAATGAAGTTACGTGGTGAATTTCCATGCAAGCTTTGTCCGGCTGTATATCCTAATTTGAGAGCCTTAAAAGGCCACAATCGTGTGCATTTAAGCGAGGCTGGTCCAGCGGGTCCTTTTCGTTGCAACATGTGTCCTTATTCGATATGCGACAAGGCTGCCTTGATTCGTCATATGCGTACTCACAATGGTGATCGTCCCTACGAGTGTGCTGTATGTAATTATGCCTTTACCACCAAAGCCAATTGCGAAAGACATTTACGCAATCGCCATGCCAAAACTTCGCGGGAGGAAGTCAAACGAGCCATCATATATCATCCATCGGAAGATTCAACCTGTGAAGATACTACGAAAAAGTTGCATATATTTTCATCAGAgttggaggaagattgtgattTAATGTCTTATCATCAACACCAGCCCAAAGATCGCTCAACTCCAGTGTCGCATCTTAAGGAAAGATTAACATTGGGCGATAGTCCTTCTGTAAAACCAGTAAAGATTCAGGTGAAAAGCCTTGAAGATCTTTTGGATAAATCAACAGCTTCATCCGGCTATCATGATAGCTACGATAAACGTAACATTGATACATCTCAAGCCCCAATTGATATGAGCATGGATGTTTTGGATTTAAGCAAAAAACCCAGTGCTCCTCTGCCACCGGTTCAAGAAGAGAAGGTAGAATCATCTATACCTTTGATGTCATTGCCGAATCCAGATGTCAACCTTAGTAGTGAAATGGTCAAGACTAAAGTGATTCCTAAAGAAGCTGATCCCAAATTAGACACATCTGTTTTGGATAAACAGCACCAACAATTGCTTTTAGCTCAGCAACAATTACTCAGTGATCCAAGCCAATTAATGCAGCAATTGTATCGAAATCTACTGTTTCCCCAATTTCCACCGTTCTTTATGCCCAACACTTTTATGAACAACAACTTtacagattttcaaaaacttttaacccGAATGATGGGAGGTGTTGCGGCAGCAGCAGCATTGCCAACCAACGATATTGAAAAACCGTCGACTTTAACACCTCTGAATCCTAACAACTCAACAAATATGCCACAAATAAGTCCATTAATATCTGAAAAATCTAATTCCGCAACTTTGGGCGCAATGTCATCACCCAAAAGTTTACTATCACCAAATCCAAATCATTTGTCTATGCCCAGGCATATAATGCCCAACACGCCATCATCACATTCCCCAAATCTAGCGCCAACAATGCTTTCAAACGGTCCCGTCAAAATGGTGCTTAAAAATGGTGTGTTTATGCCCAAACAAAAACAACGTCGTTATCGAACTGAACGCCCATTTGCATGTGAACATTGTTCAGCTCGATTTACTTTACGCTCAAATATGGAACGTCATGTTAAACAACAACATCCTCAGTTTTATGCTCAACGTCAACGCAGTGGACATCATGTTATGCGTGGTCGGGGAGCTAGCAGTGCTGCTAATATAAATAACATCTCCCATTTCCAAGCTGTAGCTCAAGCGCATTATGGCTCTGCAACACCTTCGATGAGTTCCCATTCTCCTATTTCCGATCAGGTTAAATGCGCTATATTGGCACAACAACTGAAGGCCCGCAAAGACACTGATCTGCTACAACAAGCCCTAGCTCACGGTTCGAACAGTGTTACTAATCCAAACATGTTTCCTCAACAGGGACCAAGTCTCAGTAATGGACAAGCACCCTTCTTTGCGTTTAACCCCAATCATAACCATCATCTAAGTCAAAACGGTACACCTAATGGTTCAATGGAAGATGATGAaccaaaattaataattgatgaagatgatgaggaggaagaagaagaagaggagGACATTGAAGAAATTGCTGATGATCACGAGGAAGAAGATGAAAATGAGTTTGTTTTGAATAAAGACGAAGATAAAATGGAAACTCGCCATTTGCCTACAACTGTCGAAGAAGTAAAGCTCAAGCCAGATGAACCTCAAGAATCTGCTAAAAAAGTGGCTGAGTCTATATTAGAACAAGCCATCAAAGCCAAGCAAAATATAAGACCTTTTGCCAGAACACTTGAACCTTCTATGACAACATCTAACAATAACACTATGAAAACGATGATTGCTCAAGCTCCAGCAGtgggtaaatttttaaaagaagtggCGAGTTCTTCTTTCAAAGACGAATCTCAAGATTTAGTTTCAGTCTCCGAATTAGTTGACAATGCCACTAACAATTCGGTGTCTTTCAATAGTTATTTCCGTCCATCGGATGTTGCCAATCATATGGAGCCTAGCGATGAAGATGGTTTAGTCGCCTCCTCTGCCAGTGAAAGTAACAATTCAGGAGCCGAAGATACCGTAAGTACTGAAAAACCCAAAAAGAAATCTGCATACAGTTTGGCGCCGAACAGAGTTCATTGTCCCTATTGTCAACGTATGTTCCCTTGGTCCAGTTCCCTAAGAAGACACATACTTACCCATACGGGACAAAAACCATTTAAATGCTCACATTGTCCTCTGTTGTTTACGACTAAAAGTAATTGTGACCGTCATCTTTTGCGTAAACATGGAGATGTAGAGTCCGCTGTATCTGTGTATGTACCAACCGAAGATGTTTCCGAACCCATTCCTTTACCAAAGTCAGTTGAAGAGATAGAAAGAATGCAAAGAGAGCGTGAGGAAGAAGAACGCAAACGCAAAGCCGAAGAACAAAGACAGCGTTTGGAAAAAGAACAAATAGAGAAGCAAAAATTCGAACAGGAACACCAACAAAAACAAGCATTCCTAAAGCAGTTAGCTGTCGCACAATTTCAACAGCAATTCTCGCAAAAACCCGAAACTAATCCAGTATCGTCGTCAGAACTGCCTTTTAAATGTCATCTGTGTGAGAGTTCATTTTCTGAACGCCTGCAATGTTTAGAACACATCAAATCTCTTCATGCCCAAGAATTTGCTTTACTGCTATCGAAAGGAGCCATTGAAAACGAAAGCGACTCCTCAGCTCAAATGATGTCGATGAATGAAGAAGATGAACGTCAACGATCTacagaagatacagccaaaggAGGAAAATACCCAGACTACAGTAATCGCAAGGTCATTTGCGCTTTCTGCATGAGACGTTTCTGGTCGACTGAAGATCTCCGCAGACATATGCGCACGCACTCTGGCGAAAGACCATTTCAATGTGAAATTTGCTTTAGAAAATTCACCCTTAAACACAGCATGCTTCGTCACATGAAAAAGCACAATGGTCTACTCATCAACGGCAGCCAATCGAATAGTGACAATTTGGCCAACGGCAATTCTGGCTCCGATTATTCAGACGATGAACAAACTCCAAACTCATTGCCAACACCTGCCTTGCCGATGCCAAACACCAGTATAAACGCATTAATAATGGGCTCAAAATTCCAAGAACTGCTAAACAAAGCTAACGAATGGAGAAATGGCAACTTAAATGCTTTACGCGATggtaaagaaaataattcagAGGAAACAAATGCTCCACACTCATCTGATTTGATTGGCAACTTGCTAGGCATCAGTGATcaaggtttattgaacaaattaatGTCATCACCAGATGAAGCGGCCAAGTTTTTAGGGGttgacaaataa
Protein Sequence
MLVATNAQQTAQNSPKTTRAKTPIKMERRESTSSYSSLEDLEREGKKLNAITSTPLMTNDAAIPGNVSVKTNEKSMQQTDTIDQQHSLHQRMHESDEANDYDEDESADEKSTQSRQQLLYKRRLSSRSLTDKTTSYLVEYNVNNPSSLRKKFRSNRFVLNNGDESGFVDTSNNSHLMNSTPSTLPVTATNETNPNNNCKSNSSSDTSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFTPNNNNSNNNNYNNANNNSTTPTTITTSTSTTTTTPAFSKAALSNGQLSEGVKLSTITDTTPSTTKICTPSSPVAATTTTTTKITPTVIAADNYYNQKAVVGDNGERLNGNANLESYESDGGCSSDSSAGHVYSSNNNNNDKQNNNNNNNNNNDFKINNNNYKRKHSDDQPPQVVLESKENNHNLLKRRLRPDSLRSPPTTDNNNDVVNNTANELFICPVCNESDFANNAALDHHIDSEHPKIPAKCKNCGVIYLTQHQFNIHVCPADIKGSLNLSLKQRRLSESSNHHAQEDQDEREENTRQRHELFHHFKNVMAHSNSPSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTSREEVKRAIIYHPSEDSTCEDTTKKLHIFSSELEEDCDLMSYHQHQPKDRSTPVSHLKERLTLGDSPSVKPVKIQVKSLEDLLDKSTASSGYHDSYDKRNIDTSQAPIDMSMDVLDLSKKPSAPLPPVQEEKVESSIPLMSLPNPDVNLSSEMVKTKVIPKEADPKLDTSVLDKQHQQLLLAQQQLLSDPSQLMQQLYRNLLFPQFPPFFMPNTFMNNNFTDFQKLLTRMMGGVAAAAALPTNDIEKPSTLTPLNPNNSTNMPQISPLISEKSNSATLGAMSSPKSLLSPNPNHLSMPRHIMPNTPSSHSPNLAPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINNISHFQAVAQAHYGSATPSMSSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVTNPNMFPQQGPSLSNGQAPFFAFNPNHNHHLSQNGTPNGSMEDDEPKLIIDEDDEEEEEEEEDIEEIADDHEEEDENEFVLNKDEDKMETRHLPTTVEEVKLKPDEPQESAKKVAESILEQAIKAKQNIRPFARTLEPSMTTSNNNTMKTMIAQAPAVGKFLKEVASSSFKDESQDLVSVSELVDNATNNSVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRQRLEKEQIEKQKFEQEHQQKQAFLKQLAVAQFQQQFSQKPETNPVSSSELPFKCHLCESSFSERLQCLEHIKSLHAQEFALLLSKGAIENESDSSAQMMSMNEEDERQRSTEDTAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLLINGSQSNSDNLANGNSGSDYSDDEQTPNSLPTPALPMPNTSINALIMGSKFQELLNKANEWRNGNLNALRDGKENNSEETNAPHSSDLIGNLLGISDQGLLNKLMSSPDEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260066;
90% Identity
-
80% Identity
-