Basic Information

Insect: Phasia obesa
Gene Symbol: Lip3
Assembly: GCA_949628195.1
Location: OX451216.1:155472088-155487140[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.024 3.7 9.8 0.1 3 23 435 455 433 455 0.96

2 17 0.0081 1.2 11.3 2.1 1 23 461 484 461 484 0.95

3 17 1.5 2.2e+02 4.2 0.2 3 23 489 511 488 511 0.85

4 17 0.01 1.6 10.9 0.1 1 22 519 540 519 540 0.95

5 17 9.6e-06 0.0015 20.5 0.7 1 23 548 570 548 570 0.97

6 17 0.0002 0.03 16.4 3.5 1 23 576 598 576 598 0.98

7 17 0.00012 0.019 17.0 1.3 1 23 604 626 604 626 0.95

8 17 0.32 49 6.3 2.0 2 21 633 652 632 653 0.95

9 17 0.57 87 5.5 0.2 2 23 1085 1107 1084 1107 0.95

10 17 0.46 70 5.8 0.7 1 10 1131 1140 1131 1153 0.75

11 17 0.78 1.2e+02 5.0 3.3 1 23 1161 1185 1161 1185 0.92

12 17 6.9 1e+03 2.1 0.9 3 23 1191 1212 1191 1212 0.94

13 17 0.011 1.7 10.8 0.3 2 21 1225 1244 1224 1245 0.93

14 17 0.00034 0.052 15.6 0.9 1 23 1253 1275 1253 1275 0.98

15 17 1.1e-05 0.0016 20.4 1.8 1 23 1281 1304 1281 1304 0.97

16 17 0.00011 0.017 17.2 1.3 1 23 1310 1332 1310 1332 0.98

17 17 0.0007 0.11 14.6 1.1 1 21 1338 1358 1338 1359 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.024	3.7	9.8	0.1	3	23	435	455	433	455	0.96
2	17	0.0081	1.2	11.3	2.1	1	23	461	484	461	484	0.95
3	17	1.5	2.2e+02	4.2	0.2	3	23	489	511	488	511	0.85
4	17	0.01	1.6	10.9	0.1	1	22	519	540	519	540	0.95
5	17	9.6e-06	0.0015	20.5	0.7	1	23	548	570	548	570	0.97
6	17	0.0002	0.03	16.4	3.5	1	23	576	598	576	598	0.98
7	17	0.00012	0.019	17.0	1.3	1	23	604	626	604	626	0.95
8	17	0.32	49	6.3	2.0	2	21	633	652	632	653	0.95
9	17	0.57	87	5.5	0.2	2	23	1085	1107	1084	1107	0.95
10	17	0.46	70	5.8	0.7	1	10	1131	1140	1131	1153	0.75
11	17	0.78	1.2e+02	5.0	3.3	1	23	1161	1185	1161	1185	0.92
12	17	6.9	1e+03	2.1	0.9	3	23	1191	1212	1191	1212	0.94
13	17	0.011	1.7	10.8	0.3	2	21	1225	1244	1224	1245	0.93
14	17	0.00034	0.052	15.6	0.9	1	23	1253	1275	1253	1275	0.98
15	17	1.1e-05	0.0016	20.4	1.8	1	23	1281	1304	1281	1304	0.97
16	17	0.00011	0.017	17.2	1.3	1	23	1310	1332	1310	1332	0.98
17	17	0.0007	0.11	14.6	1.1	1	21	1338	1358	1338	1359	0.95

Sequence Information

Coding Sequence: atgttattaaagaaTCGAGTAAAGTGCAAATATCAATGGCATTACATGTTCCTTATTCTAATTATAGAGAATTTTGGCGCTAAAATGCAAATTGCGGAAGCTTTTAAAGTAACGGCCAAATTGATCTCAAACTACAATTATCCAGTCGAAGAGCATACAGTTTATACACCAGATGATTATATTTTAACCATTTATCGAATACCCGATTCGCCGAAATTAAAACACTATAATAATACCGAAAAGCCTGTGGTATTTTTACAACATGGCATACTGTGTGCCTCTGACGACTGGATCATCAATGGTCCGGAAACCTCCTTAGCCTACATGATCGCCGATATGGGCTACGATGTTTGGCTAGGAAATGCTCGTGGCAACACTTATTCACGCCAGCATAAACACAAACATCCTGATTCGTCAGATTTTTGGAATTTCAGTTGGCATGAAATTGGTGTCTACGATTTGGCTGCCATGCTCGATTATGTTTTAGAAGAAACTGATCAACAATCGTTACATTTTGTAGCGCATTCTCAGGGTACAACAACGTTTTTCGTTTTAATGTCATCACTGCCATGGTACAATGAAAAAGTCAAAACGGTTCATTTGTTGGCACCCATTGCTTTCATGAGAAATCATGGATTTGTCTTGTCGAAGCTTGGTGGCATTCTATTTGGTAGTCCCTCCTCATTTTTGAGCATGATTATAGGTGGTTTGGAAATACTGCCGACGACCAGTATACAGAAATTATTTTGCGACTATGTGTGTtcgcattttaagtttttgtgttCGGGTATATTGGAGTTTATTGGCGGCTGGGGTACAAGACACTTAAACCATacTCTTTTACCTGATCTTTGTGAAACTCATCCCGCCGGCGCCTCAACTACACAATTAATTCATTACTTACAATTGTATACCTCCGGAGATTTTAAGCAACTCGATCATGGCATCGATCTTAATCTCCAAAAATACAATCAAGAAACTCCACCCCATTATGAGGTGAGCAACATAAAAAGTTGCGTGAATATGTACTACAGCAACAACGACTACATGTCAGCGGTGGAAGATGTCGAATACTTGGCCACTCTACTACCCTGTAGCGAACTTTTTCGAATACCTTATGATGATTGGAATCATTATGATTTCCTGTGGTCAGTCGAAGTCAAAGAGATGATCAATGATCGCATTTTGGAAAAGATAGAGGCCTACGAAAGAACTTAcaCCGACACCAGCACCGCTTCCACATCATCCGCCGCAGCTGCCATGCTGGTTAAACTTTCTACGGACGGTGTACCAAAACTATTTTGCCCGGTTTGCAATAAAGCTTTAGTATCACTAGCTGGTTATGTTAAGCATGTGAAGAAACATGAACCACCAGGTGGTTTCATATGTCGCTATTGTGAGGCCCGTTTTTGTTCCGATGATGAACTAAAAAAACATCGTGAATCTGAACACACCACCATAGCCTGTCGACTGTGCAAAGATGTCACCTTTACCAATGAAACTGATTATCGGGAACATATACGCGATGCCCACCAGGGCGTGGACAGAGAAATTTTTACATGTGAAAAATGTGGAGCTGCTTACAAAACTATTGATCCCTATCGTCGGCATATAGAAACTGAGTGTGGTCGTATTAAGCCATACAAATGTAATTTATGTCCAATGGCATTCGTAacgaaatataatttgaaacaacacTTGGATAATCATTCGGGTGAATTGAAGTTTTGTTGCAGTTATTGTGGAcgtaattttaagcaaaaggcTCGCTTGGTCGAACACGAAAGGACCCATACGGGAGAGAAGCCCTACAAATGTGATGTTTGTGGTAAAAGCTTTTCCCATCGCGAAAGTATTGTTACACATTCTTCCATTCATACTGGCATTCGTTTGGTAGAATGTAAGGGCTGCAGTTCAAGATTTTCCTGTTATTCTAATCTCATTAAGCACCGCCGAAATCGCCCTGATACTTGTGGTTTACCCGAATTCGATCCTCCGCGAAATCGTGTTAGAAAACATACTTCCCGAATTCCGGCCACTTTAAATCCCACCTCTGAAATCAAAGTGGTTAATGTCAATAAGATTATTAAACCTGATGATCAGGTCAAAGTTGCAGCCTTGAAAAAGGAATCATTCGACAAACCAGTTAGAATGAAACCTACTGCTCGTAAACGTACACGGCATGCACCACCACAACCAGCACCACAACCAACTTTACGCAAAAGAAGTACtagaaaaaaggttataaaCTTTGGCTTTATAGAGGATGATGACATGAAAGTTGAGCAGTGTGCTGATGAAGACGAAGAAGATAATTGGCCTcttaaaccaaaacaaaataaggtcataaaatatattgaagagaATAATATGCCGCCACCTACAGAAAGCATTTTTAATGCTAATTCTGTACAGAATCAAACGAGTACTCAATGGTCTGATGATAGTGAGGATGAATATGTGCCAGATTTTGAACCAGCAGATTCGGATGAAGAAGAGGATAGAtctattaaagattttaaaattccaaTGCCAGCGGCTTCTATTAAGCAAGAAAATTACGACGTAGACGAACATGAAGTGGCAGTTACCACAAATATACAAATAGAACCTTTGGCAGATTTTGAGTACACCCGCATGGATTCTTACAGCGCTGAGGTGAAATACGAagatgaagaaaataatttatttgatgaGAAAGATCGTATATTGGAGCatcttttaaatgaaaatgactACACCCAATTGCCGGAAGGTGTAGAGGACAAATCTATGAATAAACcgaaaataaagagaaaaagcaaaaTGCTTGAGCTTAAGAATAGCCAAGATTCTGATGACATTTTAAAAGAGGATGAAGTTGTTTATGTGAAGTATGAAGAAAGTGATGATCAGGAAGATGAGAGAGAAGATACTCTAGAAGAAAAACATAAGGCTAACGAGGTAACAAAAGATGACATTAGGGATTGTTATGTTTTACTAGAAGATATTACCCACTGTTTTCCTGTGTTGAAAAATTCCTCTACGGTAAAAGTACCCCGCAATGTACaaccattttattcaaaatcagtaaaattaaagaaattcattaaaaaacgtGGGAAATATCGACCAAGACGCTCAAAGGGTTTTAAAAACGACCCCGGCTCCGATGAAGATGTCAAAGCTGGTAAATCGTATCGTTTAGCTTCAATATCAGCCAAACAATTAAAAGAACGCatgaaacttttgaaaaaacgCGATTGGTCTTGGCAGTGTCCAGACTGcataaaaatctattatatGCGCAAACCttatgaaaaacatttaagaGAGGATCACAAAAAGTCTGAAGATTTtattaaggaaatttttaaaaatgatttggaTGAGGTTTCTACAGATGATGTTTTCAAATGTCATATAtgcgataaaatttatttgatggaAAAACGCTTAATTTCTCATATACCTAAACATGGACCCGATGGTACTTTAATACATAAATGTCCTTGTTATTGTACTTTATACTTTAGAACGCGCGAAGAGGCCACGGCTCATGCCCAGGACAAACACAAAGATCTGTTATGGTGTGAAATATGTGAGAAATATATGACAGGTTGTGATGCGCTTAAATCGCATAAGGCTCGCATACATGGCGGTGGTAAGGACTATAAAAATTCTCGTAATTTAGTGTGCATGAAATGTGGCAAAAAGTTTATGGGACGCACTCAATTAACCGATCATGAACGTTCCGATTGTGGCCGTTTACCTTTGTATCAGTGTCAAGAGTGTGGCAAATGTTTAACCACAGCTGGTATACTAAAAACTCATATGTTACTGCATAATGATGCCAGACCCTATCAGTGTGATAAATGTGGAAAAACTTTTAAGATTAAAGCGCAATATAAAACCCATATTAAATATGCACACACTGACGAAAAGCGTTTCAAATGTCATctgTGCCCCAAAGAATATCCATATCGTGAAAGCTTATTGACCCACATGTCGGTGCATACCGGCATAAAACGTTTCATGTGCAATGGCTGTGGCAAACGTTTCACTTGTGTTTCTAATCTCCAAGCTCATCGCAAAGTTCAAGCAGAAAGTTGTGGCCTTTTACCGTTAAATGCCAAAGCAACCCAGTATATGGGTGTGCAAAAGGGTAATCTACTAATGGGTGCCAAACCTGAGCCTGGCTTAGATTATGTGGAAACCAGAACGTTTGTAGCCAAAGAAGTTATTACACATGATTTACCTATGGCCCAGGAAATACAGAATCAAGCCAGAAATATGCCTCTAGACCCGTCTCTAAGCGATGGTATTCCTTTAAACTATGTAACTTCCGGATCTGAaattatacttatgtataataGAGATTAA
Protein Sequence: MLLKNRVKCKYQWHYMFLILIIENFGAKMQIAEAFKVTAKLISNYNYPVEEHTVYTPDDYILTIYRIPDSPKLKHYNNTEKPVVFLQHGILCASDDWIINGPETSLAYMIADMGYDVWLGNARGNTYSRQHKHKHPDSSDFWNFSWHEIGVYDLAAMLDYVLEETDQQSLHFVAHSQGTTTFFVLMSSLPWYNEKVKTVHLLAPIAFMRNHGFVLSKLGGILFGSPSSFLSMIIGGLEILPTTSIQKLFCDYVCSHFKFLCSGILEFIGGWGTRHLNHTLLPDLCETHPAGASTTQLIHYLQLYTSGDFKQLDHGIDLNLQKYNQETPPHYEVSNIKSCVNMYYSNNDYMSAVEDVEYLATLLPCSELFRIPYDDWNHYDFLWSVEVKEMINDRILEKIEAYERTYTDTSTASTSSAAAAMLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFICRYCEARFCSDDELKKHRESEHTTIACRLCKDVTFTNETDYREHIRDAHQGVDREIFTCEKCGAAYKTIDPYRRHIETECGRIKPYKCNLCPMAFVTKYNLKQHLDNHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKSFSHRESIVTHSSIHTGIRLVECKGCSSRFSCYSNLIKHRRNRPDTCGLPEFDPPRNRVRKHTSRIPATLNPTSEIKVVNVNKIIKPDDQVKVAALKKESFDKPVRMKPTARKRTRHAPPQPAPQPTLRKRSTRKKVINFGFIEDDDMKVEQCADEDEEDNWPLKPKQNKVIKYIEENNMPPPTESIFNANSVQNQTSTQWSDDSEDEYVPDFEPADSDEEEDRSIKDFKIPMPAASIKQENYDVDEHEVAVTTNIQIEPLADFEYTRMDSYSAEVKYEDEENNLFDEKDRILEHLLNENDYTQLPEGVEDKSMNKPKIKRKSKMLELKNSQDSDDILKEDEVVYVKYEESDDQEDEREDTLEEKHKANEVTKDDIRDCYVLLEDITHCFPVLKNSSTVKVPRNVQPFYSKSVKLKKFIKKRGKYRPRRSKGFKNDPGSDEDVKAGKSYRLASISAKQLKERMKLLKKRDWSWQCPDCIKIYYMRKPYEKHLREDHKKSEDFIKEIFKNDLDEVSTDDVFKCHICDKIYLMEKRLISHIPKHGPDGTLIHKCPCYCTLYFRTREEATAHAQDKHKDLLWCEICEKYMTGCDALKSHKARIHGGGKDYKNSRNLVCMKCGKKFMGRTQLTDHERSDCGRLPLYQCQECGKCLTTAGILKTHMLLHNDARPYQCDKCGKTFKIKAQYKTHIKYAHTDEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQAESCGLLPLNAKATQYMGVQKGNLLMGAKPEPGLDYVETRTFVAKEVITHDLPMAQEIQNQARNMPLDPSLSDGIPLNYVTSGSEIILMYNRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01174456;
90% Identity: -
80% Identity: -