Basic Information

Insect: Phania funesta
Gene Symbol: Lip3
Assembly: GCA_963932375.1
Location: OZ010653.1:110250043-110259372[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.022 2 9.8 0.1 3 23 434 454 432 454 0.96

2 16 0.005 0.46 11.8 2.8 1 23 460 483 460 483 0.96

3 16 0.78 72 4.9 0.1 3 23 488 510 487 510 0.85

4 16 0.0095 0.87 10.9 0.1 1 22 518 539 518 539 0.95

5 16 6.7e-06 0.00061 20.9 0.9 1 23 547 569 547 569 0.97

6 16 0.00018 0.016 16.4 3.5 1 23 575 597 575 597 0.98

7 16 0.00011 0.01 17.0 1.3 1 23 603 625 603 625 0.95

8 16 0.026 2.4 9.6 1.4 2 21 632 651 631 652 0.95

9 16 0.7 65 5.1 0.2 2 23 1078 1100 1077 1100 0.94

10 16 0.47 43 5.6 0.6 1 10 1124 1133 1124 1146 0.79

11 16 2.7 2.5e+02 3.2 4.8 1 23 1154 1178 1154 1178 0.90

12 16 0.01 0.93 10.8 0.3 2 21 1218 1237 1217 1238 0.93

13 16 0.00031 0.028 15.6 0.9 1 23 1246 1268 1246 1268 0.98

14 16 9.6e-06 0.00088 20.4 1.8 1 23 1274 1297 1274 1297 0.97

15 16 0.0001 0.0091 17.2 1.3 1 23 1303 1325 1303 1325 0.98

16 16 0.00064 0.059 14.6 1.1 1 21 1331 1351 1331 1352 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.022	2	9.8	0.1	3	23	434	454	432	454	0.96
2	16	0.005	0.46	11.8	2.8	1	23	460	483	460	483	0.96
3	16	0.78	72	4.9	0.1	3	23	488	510	487	510	0.85
4	16	0.0095	0.87	10.9	0.1	1	22	518	539	518	539	0.95
5	16	6.7e-06	0.00061	20.9	0.9	1	23	547	569	547	569	0.97
6	16	0.00018	0.016	16.4	3.5	1	23	575	597	575	597	0.98
7	16	0.00011	0.01	17.0	1.3	1	23	603	625	603	625	0.95
8	16	0.026	2.4	9.6	1.4	2	21	632	651	631	652	0.95
9	16	0.7	65	5.1	0.2	2	23	1078	1100	1077	1100	0.94
10	16	0.47	43	5.6	0.6	1	10	1124	1133	1124	1146	0.79
11	16	2.7	2.5e+02	3.2	4.8	1	23	1154	1178	1154	1178	0.90
12	16	0.01	0.93	10.8	0.3	2	21	1218	1237	1217	1238	0.93
13	16	0.00031	0.028	15.6	0.9	1	23	1246	1268	1246	1268	0.98
14	16	9.6e-06	0.00088	20.4	1.8	1	23	1274	1297	1274	1297	0.97
15	16	0.0001	0.0091	17.2	1.3	1	23	1303	1325	1303	1325	0.98
16	16	0.00064	0.059	14.6	1.1	1	21	1331	1351	1331	1352	0.95

Sequence Information

Coding Sequence: ATGATCACTTCAAAGGGCTTGGAAAAGTTTAGTGTTCTACTCATTTTATCGGAGACGTTGAGATATGGCGACTTGGAGCTTTCCAAACGAGGTCCGGACTGCCCAGCCAAATTGATCTCAAATTATAATTATCCCGTCGAAGAGCACACAGTTCATACACCTGATGattatattttaaccatttATCGCATACCCGATTCGCCTAAATTAAAATACCACAACAATACAGAAAAACCCGTAGTATTCTTACAACACGGCATACTGTGTGCCTCGGATGATTGGATCATCAATGGTCCGGAAACCTCATTAGCCTACATGTTCGCCGACTTGGGCTATGATGTGTGGTTAGGAAATGCTCGTGGCAATACCTACTCACGCcagcacaaacacaaacacCCTGATTCTtcagatttttggaattttagttGGCATGAAATCGGTGTCTATGATTTGGCCGCCATGCTTGATTATGTTTTAGAGGAAACTGAACAACAATCATTACATTTTGTGGCTCATTCTCAGGGTACAacgacattttttgttttaatgtcttCACTGCCTTGGTACAATGAAAAGGTCAGAACAGTTCATTTGCTGGCACCCATTGCCTTTATGAAGAATCATTCGTTTATGTTGTCGAAGGTGGGTGGCATATTTTTGGGTTATCCCTCATTTATGAGCATGATTTTGGGTGGTTTGGAATTGTTACCGACAACCAGTGTGCAGAAATTGTTTTGCGAGTATGTGTGTTCGCATGattcacattttaaatttttgtgttcaagTATATTGGATTTTATTGGCGGCTGGGGTACAAAGCATTTTAACCATACTCTGTTGCCTCATGTTTGCGAAACTCATCCCGCTGGGGCCTCTACCACACAAATTATTCACTATTTGCAATTGTACACCTCAGGTGATTTTAAGCAATTCGATCATGGCATTGATATAAATCTGAAGAAATACAACCAAGAAACCCCACCACACTATGAGGTGGGCAACATAAAAAGTTGTGTGAACATGTACTACAGTAACAATGACTATCTATCAGCAGTGGCAGACGTTGAGTACTTGGCCACTCTTTTACCTTGTTCCGAGCTCTTTCGGATACCATATGATGATTGGAATCATTATGATTTCCTGTGGTCAGTGAATGTCAAAGAGGTGATCAATGATCGTATCATAGAAAAGATAGCAACATACGAAAAAACTCACCTCGATACGAGTTCAGCTTCTACATCAACAGACGCTGCTGCTATGCTAGTTAAACTTTCTACGGACGGTGTACCCAAGCTGTTTTGCCCGGTTTGCAACAAAGCTTTGGTGTCACTAGCTGGTTATGTCAAGCACGTCAAAAAACATGAACCTCCTGGCGGTTTTACATGTCGCTATTGTGAAGCCCGTTTCTGTTCTGATGATGAACTAAAAAAACATCGTGAATCAGAACATACCACCATAGCCTGTCGTCTGTGCAAAGATGTCACGTTTACCAATGAAGATGAGTATAGGGAACATATACGTGATGTTCATAAAGGTGTGGACAGAGAAATATTTACTTGTGAAAAATGCGGCGCTGCATACAAAACTATCGATCCTTATCGTCGACATATAGAAACAGAATGTGGTCGTATTAAGCCATACAAATGTGATAAATGCCCCATGGCATTTGTAacgaaatataatttgaaacaaCATTTGGATAATCATTCGGGagaattaaagttttgttgcaGTTATTGCGGAcgtaattttaagcaaaaagcaCGTTTGGTAGAACATGAAAGGACCCATACGGGAGAGAAACCCTACAAATGTGATgTTTGTGGCAAAAGTTTTTCCCATCGGGAAAGTATCGTTACACATTCTTCCATTCATACCGGAATTCGGTTAGTAGAATGTAAAGGTTGTGGTTCAAGATTTTCCTGTTATTCTAATCTTATCAAACATCGCCGAAATCGTCCCGATACTTGCGGATTGCCGGAGTTTGATCCTCCTCGCAATCGGGTTAGAAAACATACTTCAAGAATTCCTGCCACTTTAAATCCCACCTCTGAAATCAAAGTGgtaaatgtcaataaaatcattaaaccTGATGATCAAGTAAAAGTGGCTGCTATGAAAAGAGAATCGGCCGACAAACCTATCAGAACGAAACCTACTGCTCGCAAACGTACAGGACCTCCGCCACAACTTCCCATCCTTCGTAAGAGAGacacaagaaaaaaagttattagcTTTGATGCTAGAGATGAAGACTTTAAAAGTGTGGAAATTATTGACGAGGACGAAGAGGATAATTTCCCCctcaaaccaaaacaaaaaattgaaatgaataatACTGAAGAGAATAGTATTCTACCACCTCCAGAAGTCCTACTGGGTGATAAGCCATTACAAAATCAAAAGAGCACTCAATGGTCAGATGATAGTGAGGATGAATATGTACCAGATTTTGAACCAGCCGATTCCGACTCGGATGAAGAAGAAGATAGATCccataaagattttaaaattccaatGCCAGTTGCTTctattaaacaagaaaattatgaGGATGATAACGATGTTCCAATTactacaaatatacaaatagaACCTTTGGCAGATTTTGAATATACTCGCATGGATACCTACAGTGCTGAGGTGAAATACGAAGATGAAgaagataatttatttgatGAAAAAGATCGCATATTAGAGCAtctattaaatgaaaatgattttagCGAATTGGCCGACATTAATTcgaagaaatttaataatcagTCTAATATTAAAAGGAAGCGAAGAGAGCCTGAGAAAATGTATGATTCCgatgatattttaaaagaagCTGAAGTAGTTTATATCAAATATGAAGAAAGTGATGATCAAGCTGATGGCAAAGAAGATATTTTAGAAGAAAAGCACAAGgCCACCGATGTTACTAAGGATGATATTAAGGATTGTTATGTTTTACTAGAAGATGTTACCAACTGTTTTCCTCTGTTAAAGGATACCTGTACAGTGAAGGTACCACGCAATGTACAGCCATTCTTTTCAAAAtcggacaaaattaaaaaattcattaaaaaacgtGGTAAATATCGTCCTAGGCGTacaaaaaacatcaaaaccGAACCCGGTTCCGATGAAGATTGCAAAACTGGTAAATCTTATCGTTTGGCTTCAATATCAGCCAAACAGTTAAGGGAACGCATGAAGCTTCTGAAGAAACGCGATAAGTCTTGGCAGTGTCCGGACTGTATAAAAATCTATTACATGCGCAAGCcttatgaaaaacatttaagagATGATCACAAAAAGCCTGAAGAttttattaaggaaattttcaaaaatgatttgGAAGAAGTATCTGCTGATGATGTCTTCAAATGTCATATATGTGATAAAATTTACTTGATGGAAAAACGGTTATTATCCCATATACCAAAACATGGACCCGACGGCAGTTTAGTACACAAATGTCCCTGTTATTgtactttatattttacaacGCGCGAAGAAGCCACTGCTCATGCCCACGAAAAGCACAAGGATCTTCTGTGGTGTGAactatgtgaaaaatttatgaCAGGTTGTGATGCTCTTAAATCGCATAAGGCCCGCATTCATGGCGGTAATAAGGATTATAAAAACTCTCGTAATTTAGTGTGCATGAAATGTGGAAAGAAATTTATGGGACGCACTCAATTAACCGACCATGAACGTTCCGATTGTGGTCGCTTGCCTTTGTATCAGTGTCAAGAGTGTGGTAAATGTTTAACAACAGCTGGTATACTAAAAACCCATATGTTACTGCATAATGATGCTAGACCCTACCAATGCGATAAATGTgggaaaacctttaaaattaaagccCAGTATAAAACCCACATTAAATATGCTCACACCGACGAAAAGCGCTTCAAATGTCATctGTGCCCCAAAGAATATCCTTATCGCGAAAGTTTATTAACCCACATGTCGGTGCATACAGGCATCAAGCGTTTTATGTGTAATGGTTGCGGCAAGCGTTTCACCTGTGTTTCTAATCTCCAAGCGCATCGGAAAGTACAAGCGGAAACTTGTGGCCTTTTACCTTTAAATGCAAAAGCTACCCAGTACATGGGAGTGCAAAAAGGTAATCTCTTAATGGGTGCCAAGCCTGAGCCCGGTTTAGATTACGTGGAAACTAGAACTTTTGTAGCCAAAGAAGTTATAACTCGTGACTTGCCTATGGCCCAAGAAATCCATAATCAATCCAGAAATTTGCAACAAGATGCATCACTAAGTGATGGTATTCCTTTGAACTATGTAACTTCAGGATCTGAAattatacttatgtataatAGAAATTAA
Protein Sequence: MITSKGLEKFSVLLILSETLRYGDLELSKRGPDCPAKLISNYNYPVEEHTVHTPDDYILTIYRIPDSPKLKYHNNTEKPVVFLQHGILCASDDWIINGPETSLAYMFADLGYDVWLGNARGNTYSRQHKHKHPDSSDFWNFSWHEIGVYDLAAMLDYVLEETEQQSLHFVAHSQGTTTFFVLMSSLPWYNEKVRTVHLLAPIAFMKNHSFMLSKVGGIFLGYPSFMSMILGGLELLPTTSVQKLFCEYVCSHDSHFKFLCSSILDFIGGWGTKHFNHTLLPHVCETHPAGASTTQIIHYLQLYTSGDFKQFDHGIDINLKKYNQETPPHYEVGNIKSCVNMYYSNNDYLSAVADVEYLATLLPCSELFRIPYDDWNHYDFLWSVNVKEVINDRIIEKIATYEKTHLDTSSASTSTDAAAMLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFTCRYCEARFCSDDELKKHRESEHTTIACRLCKDVTFTNEDEYREHIRDVHKGVDREIFTCEKCGAAYKTIDPYRRHIETECGRIKPYKCDKCPMAFVTKYNLKQHLDNHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKSFSHRESIVTHSSIHTGIRLVECKGCGSRFSCYSNLIKHRRNRPDTCGLPEFDPPRNRVRKHTSRIPATLNPTSEIKVVNVNKIIKPDDQVKVAAMKRESADKPIRTKPTARKRTGPPPQLPILRKRDTRKKVISFDARDEDFKSVEIIDEDEEDNFPLKPKQKIEMNNTEENSILPPPEVLLGDKPLQNQKSTQWSDDSEDEYVPDFEPADSDSDEEEDRSHKDFKIPMPVASIKQENYEDDNDVPITTNIQIEPLADFEYTRMDTYSAEVKYEDEEDNLFDEKDRILEHLLNENDFSELADINSKKFNNQSNIKRKRREPEKMYDSDDILKEAEVVYIKYEESDDQADGKEDILEEKHKATDVTKDDIKDCYVLLEDVTNCFPLLKDTCTVKVPRNVQPFFSKSDKIKKFIKKRGKYRPRRTKNIKTEPGSDEDCKTGKSYRLASISAKQLRERMKLLKKRDKSWQCPDCIKIYYMRKPYEKHLRDDHKKPEDFIKEIFKNDLEEVSADDVFKCHICDKIYLMEKRLLSHIPKHGPDGSLVHKCPCYCTLYFTTREEATAHAHEKHKDLLWCELCEKFMTGCDALKSHKARIHGGNKDYKNSRNLVCMKCGKKFMGRTQLTDHERSDCGRLPLYQCQECGKCLTTAGILKTHMLLHNDARPYQCDKCGKTFKIKAQYKTHIKYAHTDEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQAETCGLLPLNAKATQYMGVQKGNLLMGAKPEPGLDYVETRTFVAKEVITRDLPMAQEIHNQSRNLQQDASLSDGIPLNYVTSGSEIILMYNRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01177173;
90% Identity: -
80% Identity: -