Pobe023765.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- Hr39
- Assembly
- GCA_949628195.1
- Location
- OX451216.1:134532145-134544617[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.28 8e+03 -2.5 0.1 99 160 152 211 63 233 0.63 2 4 2 5.7e+04 -7.5 12.5 65 158 272 382 216 423 0.51 3 4 4.8e-15 1.4e-10 42.9 15.1 1 154 505 696 505 707 0.76 4 4 8.3e-80 2.4e-75 256.2 0.2 187 408 694 903 689 903 0.95
Sequence Information
- Coding Sequence
- atgTCGACcattaaaacagaaaatgtaACAGGAGGAGTAGGAGGAGGAACAGTGGTCACTACCACTACAACAAGTGGAGCTTCCTTTCAACTACCTATTAATATGAGCAATACAGCAGATGGAGGGAGAAGTGTTGTAGGAGAAAATAGTAGCACAGGCATAAGCACAACCACTTGTACAACCACTACAACCAGGAATAATGTGTCTGTGACAAATATTAAATGTGAAGTGGATGATAGTGGAAATTCGTCATCCTCAACGAATGGCAATATATTTTCAGTGGGATTTTATAATAGTTCTAGAGGCATGAGTGGGACAAGTGTAATAACGGCTGGACATGGTATACGAATACCGGTCCCCAAAGCCGAGGACTCGGACTCAGAGACGGAGTTgacaaatattgaaaatttaaaagttaccCGGCGGGTGGTAAGTTCTTCTTCCAGTTCCACAAACAACCATCATAATGGACCACGACCTATGTCATGGGAAGGAGAATTGTCCGAAAATGAAGATACCCGGGAGGCCGAGCTAATGGATACGGATACTACCATGAGTAATGGTGGCATCCAGGAACCCTCAAATGCTGTGGCTGTTATTAAAAGTGAAGCTACTACCACCACCCCTTCAACAGCTGGAGCGGGTGGTTCTATATTTAAAACTGACACAGAACAATTAATGTTAGATGTTCATAATGCGGCAGCTACAGGTGGTATATATCATCCCAAATTAAAGTTGGCACCCACCCAAAGTGATCCCATCAATTTGAAGTATGAGCCACCTGATCATTCAGCTTTGGTGAATTCGCCTTTGATGGCTCGCCAAAAGTCCACCACAGCTCTGCCTCATTTGCCTGCCAATCCCAGTCCAGATTCCGCCATACATTCCGTATATACGCACAGCTCACCTTCCCAATCGCCATTGACATCACGACATGCTCCCTACACTCCCTCCCTATCACGCAATAACAGTGATGCATCTCACAGCTCTTGCTATTCTTATTCTTCGGAATTTAGTCCCACCCATTCACCCATACAAGGCCGACATCCGGCGCCTCATGGTGTATATGGTAGTTTTAATGGAGCCGCTGCCAGTAGCTTGCAACATTCCTCTTTACTCTATAGACCCATGATGGGTTCAACACAATCGGGACAATCAACAAAGTTGGATGCAGCAGGAGAGGTGCAAAATTTATCTATGGATGCGTCATCGTCCTCCTCAAGCTTCAACATAACTACCGATTCTTCTGGCTTACCAGCCTCACCAGCTGCTGGTATTTCGCGGCAACAGcttataaattcgccttgcccCATATGCGGCGACAAAATATCGGGTTTCCATTATGGCATCTTTTCATGTGAATCCTGCAAAGGTTTCTTCAAGCGTACCGTCCAAAATCGTAAGAATTATGTTTGCGTGCGGGGTGGACCCTGTGCGGTAAGCATTACTACCCGTAAGAAATGTCCCGCTTGTAGGTTTGATAAATGTCTGCAGAAAGGCATGAAACTGGAGGCAATCAGAGAAGATCGCACACGGGGAGGTCGTTCTACTTATCAATGCTCCTATACTCTACCCAATTCTATAATGAGTCCTCTACTCTCGCCCGAACAGCAGCCACAACAGAACTCTGCACAAAATCTAATGACCGGTCAACAACATTCACAATTACAACATCAACTGCAGCAACGTTTAAATCCTCCCCTGCCATCACCGCATCAATCAAATGGCTATGGTTTACAAAACTCCaatccaacaacaaataccattaaaaCCGAACAAAGTGATTCTAATAGCAAGAATCCACATGCTGTTCATTCACCTTCAATGAATGGTTTAAATACGTCTTCATCCCGTGCATATTCATCAACTATTACTAATAATACTTCTTCCGCCTCTTCTTCTAATTCACTGCATCACAACAGTATTCCCcaacttttacaagaaattatggATGTTGAACATCTTTGGCAATACACAGATGCCGAATTGGCAAGACTAAATCAACCGATGACCTCGTCTTCCAGTTCAGCTTCACATAACTCCAATTCAACAGATTCTTCTGCAGCTGCCAATCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTCTCGTCTAGCACCAATCCCGATCTGATAGCTCATCTGTGCAAGGTGGCTGATCATCGTCTTTATAAGATTGTGAAGTGGTGCAAGAGTTTGCCGTTATTTAAGAACATATCGATTGACGATCAAATTTGCCTTCTCATCAACTCGTGGTGTGAACTTTTACTTTTCTCCTGCTGCTATCGCTCCATCGATACACCAGGAGAAATTAAAATGTCTCTGGGCAAATCAATAACACTGCCACAAGCCAAACTTACTGGTTTTCAgcCCTGCATTGAAAGAATGCTGAATCTGACAGATCATTTAAGACGTTTACGTGTTGATCGTTATGAATATGTTGCTATGAAAGTTATTGTACTGCTGCAATCAGACACTTCGGAACTTCAAGAACCCGTAAAAGTAAGGGAATGTCAAGAGAAGGCTTTGCAAAGTTTACAGGCCTACACATTGGCTCACTATCCAGACTGTCCTTCGAAATTTGGTGAATTATTGTTGCGTATACCCGATCTACAGAGAACGTGTCAGTTGGGCAAAGAAATGCTGTCTATTAAATCCCGTGATGGTGGtgactttaatttattaatggaGCTTTTAAGAGGAGAACATTGA
- Protein Sequence
- MSTIKTENVTGGVGGGTVVTTTTTSGASFQLPINMSNTADGGRSVVGENSSTGISTTTCTTTTTRNNVSVTNIKCEVDDSGNSSSSTNGNIFSVGFYNSSRGMSGTSVITAGHGIRIPVPKAEDSDSETELTNIENLKVTRRVVSSSSSSTNNHHNGPRPMSWEGELSENEDTREAELMDTDTTMSNGGIQEPSNAVAVIKSEATTTTPSTAGAGGSIFKTDTEQLMLDVHNAAATGGIYHPKLKLAPTQSDPINLKYEPPDHSALVNSPLMARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHPAPHGVYGSFNGAAASSLQHSSLLYRPMMGSTQSGQSTKLDAAGEVQNLSMDASSSSSSFNITTDSSGLPASPAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQPQQNSAQNLMTGQQHSQLQHQLQQRLNPPLPSPHQSNGYGLQNSNPTTNTIKTEQSDSNSKNPHAVHSPSMNGLNTSSSRAYSSTITNNTSSASSSNSLHHNSIPQLLQEIMDVEHLWQYTDAELARLNQPMTSSSSSASHNSNSTDSSAAANQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSLGKSITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELQEPVKVRECQEKALQSLQAYTLAHYPDCPSKFGELLLRIPDLQRTCQLGKEMLSIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01259264;
- 90% Identity
- iTF_01177011;
- 80% Identity
- iTF_01177011;