Pobe014013.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- dmd-4
- Assembly
- GCA_949628195.1
- Location
- OX451215.1:203660939-203668218[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-24 3.5e-20 73.2 11.4 1 47 46 92 46 92 0.98 2 2 0.5 7.2e+03 -1.4 0.9 23 32 334 343 332 347 0.72
Sequence Information
- Coding Sequence
- atgtcCTCTTTAGTGACTACAACTGCCACCAAGGAATTATCCTCTACAACTTCTTCGGTTGGAAAACAGCCACGCAAATCTTTAAAATCCACTGCGGCGGCGGACGCTCCATCATGTAAAACTCCGTCTACAAATCGTATTCCGAAATGTGCTCGGTGTCGCAATCATGGCTGGATATCGGAATTAAGGGGCCATAAGAAACATTGCAGCTATAAGAACTGTCGTTGTGCTAAGTGTGTTCTAATTTTCGAAAGACAACGAATAATGGCGGCTCAGgtGGCCCTAAAGCGTCAACAGGCTGTAGAAGATGCCATTGCATTGCGTTTAGTAACCACTAAAACTGGCCAACAAATGGACAGTCTGCCCCAAGGCAATATATTTGATTTAGCTGAAAATCTCCGGGACATTAAACCTGCCAAGGAGTCCCAACAAGAAACTGTTGAAGATTTAAGTTTAACTGCGAAACAAGCcgaaactttacaaaaaactactttCACTTGCAAGTTAAATTCAGCAGACAGTGTAAATGTGGTATCCAATAccacatcatcatcatcgccaTCATCGTTATCTTCTGCCACCACCACCACTACCATTACGACTTGTTTACCCGATGCCAAAGTATCACATAATGCTATCGATATGTTGTCTCAGCTGTTTCCCAAAAGAAAACGTGCTGTTTTGGAATTGATTTTAAAGAGATGTGATTCTGATTTGGTAAAAgccatagaaaatatttcatctTCCTATAGAGATCATCAGggtgaaattgaaaataaacttGATCAGACAGGGGCAACAGGGGCTGTAAAAAGTGCTTTTAAACCGGTTTATGGCACAGCGAATATGcaCCCTAAACCTTTAACTTTCGGCAGCACTTTATGTTCTACGACCACAACTTATCCTAAATGGTTTGTGCCACTTACATTTCCTATAACTTTCCAAGGTCATTTGGCACCAGCTCTACCACCGTCGTCATCATTACCGCCACTAAATTCTCGCTGTACTTTGCCAAATTGTACATGTTTAGAAAGTTATCAATTTAATTgttcataa
- Protein Sequence
- MSSLVTTTATKELSSTTSSVGKQPRKSLKSTAAADAPSCKTPSTNRIPKCARCRNHGWISELRGHKKHCSYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVTTKTGQQMDSLPQGNIFDLAENLRDIKPAKESQQETVEDLSLTAKQAETLQKTTFTCKLNSADSVNVVSNTTSSSSPSSLSSATTTTTITTCLPDAKVSHNAIDMLSQLFPKRKRAVLELILKRCDSDLVKAIENISSSYRDHQGEIENKLDQTGATGAVKSAFKPVYGTANMHPKPLTFGSTLCSTTTTYPKWFVPLTFPITFQGHLAPALPPSSSLPPLNSRCTLPNCTCLESYQFNCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -