Pant014325.1
Basic Information
- Insect
- Pharmacophagus antenor
- Gene Symbol
- Rel_1
- Assembly
- GCA_018245475.1
- Location
- DWQX01006245.1:1-8554[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-30 7.6e-26 92.7 0.6 1 129 60 186 60 196 0.89 2 2 1.3e-05 0.15 13.7 0.0 128 168 248 285 199 286 0.86
Sequence Information
- Coding Sequence
- atgtctgCAAGTGATTCTGATATCAGTGAATCGTCCAGTCAGGAATCGCCTCTTTCTCAAATAGAATCGCCGTATAGTTCTCCGTCTCAGCATGTACCTCAGTTAGCAAATTTTTTAACTGTACTTTCTTGTGATGATGAATCATCATTTAATAAGAATGGCGgAAAAAATCCCTACTTACGAATTATTGAACAACCACAAAATCATTTTAGATTTCGGTATAGAAGTGAAATGCTTGGAAGTCATGGATGTTTGGTGGGCAAGAATTCTAGTAACAGTAAAACACATCCAACTGTTGAAttgGTTAACTATAAGGGACAAGCACGAATTAGATGTCGCTTAGCGCAACATAATAATCCCGATGAGCATCCCCACAAATTACTGGAAGACGAACAAGACAGGGACGTGAGCACAAAGGTGCCTGAACATGGGAGCTATAAAGTCGGATTTCCTGGTATGGGTATAATACACACAGCAAAGAAAGACATACCACAGCTTTTATTCAAAAAGTATGAGAGTAGGTTGAAAAACTCGTCGATTGATGAAAGAACGAATCGCTTCCAAGAGACCGGCAGTGTTTCCAGAAGACCCGGTTCAggtagagttcgtgtaacaaTGGCGCACGAGGATCGATACGTCCAACTAAGTGTTCTTCGTGATCGTACAGTAACGGCCCGGTTTGAAGACGACGCGGCGAGCGGTTTTCGAAGTCCTGTATACACCAAGcTTCGTGCGCGGTGCGATAACATTGCCAGGAATATCAATTTGAATATTGTCCGGCTCAGATTCAGTGCCCATGATATTTTCACCAACAAGGAGATTTGCGATCCCGTTTTCTCCGAACCCATACACAATATGa
- Protein Sequence
- MSASDSDISESSSQESPLSQIESPYSSPSQHVPQLANFLTVLSCDDESSFNKNGGKNPYLRIIEQPQNHFRFRYRSEMLGSHGCLVGKNSSNSKTHPTVELVNYKGQARIRCRLAQHNNPDEHPHKLLEDEQDRDVSTKVPEHGSYKVGFPGMGIIHTAKKDIPQLLFKKYESRLKNSSIDERTNRFQETGSVSRRPGSGRVRVTMAHEDRYVQLSVLRDRTVTARFEDDAASGFRSPVYTKLRARCDNIARNINLNIVRLRFSAHDIFTNKEICDPVFSEPIHNM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -