Ptie020483.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- Hr39
- Assembly
- GCA_963931995.1
- Location
- OZ008368.1:33520142-33530898[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.79 3.6e+04 -4.0 0.3 134 162 191 219 135 235 0.57 2 4 1.6 7.2e+04 -5.0 10.9 46 176 284 425 268 437 0.63 3 4 2.3e-16 1.1e-11 47.2 18.0 1 160 508 715 508 726 0.83 4 4 2.4e-50 1.1e-45 159.1 0.3 185 327 706 838 702 844 0.92
Sequence Information
- Coding Sequence
- ATGTCTACCATTAAGACAGAGAATATCGCAGGAGCAGCTTTGGTCACAACAACCACGGCCACAGCACATGCAGCCGTTATTGGTGGGGGTGCGACCACATTTCAATTACCCATCAACATGAGCACTACAGGTTTAGGAGGTGGAAGTGGTGGCGTTATAACCACCACTACGACTACCACACGCAATAACATCTCTGTGACCAACATAAAATGTGAAGTGGATGATGGTTCTACCTTGTCATCTTCGTCGACGTCTACAAATGGTAATATAGTATCGGTTGGCTTTTATAATGGCTCAAGAGGAGGAGGTGCAATCATGGGTTCAGCGGGACAATCTGCAGGCGTTATAACCTCGGGTCACGGCATACGCATACCTGTAACTAAAACCGAGGATTCGGATTCGGAAACAGAGCTAACCCACATTGAAAATTTAAAGGTTACCCGTAGAGTAGTATCTTCCAGCAGCTCATCTACAAATCATTATAATGGACCAAGACCCATGTCATGGGAGGGGGAACTGTCTGAGAACGAAGACACTCGAGAAGCTGAACTTATGGACACTGACACAACGATGAGCAACGGAGGTACACAAGAGCCTATAAATGCGGTGGCTGTTATTAAAAGTGAGGCTACCACTACGACACCATCGGGCCAAGGTTCACTACTGCAATCGGAATCCGATCACACAGCGTTAGATATTCATCATTCTACTGGTGGAGGGATTTATCACCCGAAACTCAAGTTGGCGCCTACACAAAGTGATCCCATTAATCTGAAATATGAACCACCTGATCTTGGTGGCCTGGTCAACTCTCCCCTAATGGCCCGCCAAAAGTCCACTACAGCTTTGCCTCATCTACCTGCCAATCCCAGTCCTGATTCTGCCATACATTCCGTGTACACTCACAGTTCCCCATCACAATCGCCGCTAACGTCAAGGCATGCTCCTTACACACCTTCGTTGTCTAGGAATAATAGCGATGCTTCCCACAGTTCCTGTTACTCCTATTCCTCCGAATTCAGTCCTACGCATTCACCCATTCAGGGTCGACATCAAACTCCCCATGTGGTGTATGGTAGTTTTAACGGGGCCTCCACGAACAGTTTGCATCATTCCGCTTTGCTTTACCGGCCAATGGCGGGCAGTTCCCAAGGAAATCAAACGCCTAAACTGGAGAATACTTCAGGCGAAGCCCAAAATCTCTCGATGGATGCTTCCTCCCTACCTTCCACCCTTAACATGAGCACAGATTCATCTGGTTTGCCAGCGTCCCCCGCAGCGGGTATATCCCGACAACAATTGATTAATTCGCCTTGCCCCATCTGTGGTGATAAGATATCCGGTTTCCATTATGGCATCTTTTCTTGTGAATCCTGTAAAGGTTTCTTCAAACGTACCgtccaaaatcgcaaaaactatgTGTGTGTCCGAGGAGGACCCTGTGCAGTGAGCATTACCACACGCAAAAAGTGTCCCGCATGTCGTTTCGACAAGTGTCTGCAGAAAGGTATGAAGCTGGAAGCGATTAGGGAAGATCGCACTCGGGGCGGAAGGTCAACTTATCAATGTTCATATACTTTGCCCAACTCCATAATGAGTCCCCTTCTTAGTCCAGAGCAACAACAGTCCTCGGCGCAGAGTCTACTAACGCAACATCAGCAAAGCCAGCTGCAACATCAACTTCAACAAAGATTAAATCCTCCACTGCAATCACCCCATAATCATACCAATGGTTTTGGCTCTTTGAATTCTTCCACCTCCAACAACACcaccataaaaaccgaaattaccgATTCCTACACCAAGAACAATACTACGACTCCATTTCCAGCACATTCTCCATCGCTGAATGGTATGAATGCCACCTCTGCTTCGCCGCGTAATCACTCGCATTCACATTCATCTTCAGCTTCCAGCAATTCCCACAACacatcttcatcatccaactcccaCAACAACAGTATTCCTCAACTTCTTCAAGAGATCATGGATGTTGAACATCTTTGGCAATACACCGATGCCGAATTGGCACGTCTCAATCAACCACTGACGTCGTCTTCATCATCAGATTCGCATAATTCATTATCGACTGACTCATCACCAGCAGCTGCCAGTCAAATGACCAATCCACTGCTGGCCAGTGCTGGTCTATCGTCGAGCACTAATCCGGATTTGATAGCACATTTGTGTAAGGTGGCCGATCATCGGTTGTACAAGATTGTAAAGTGGTGCAAGAGCCTGCCACTCTTTAAGAACATATCGATCGACGATCAAATTTGCCTACTTATCAATTCATGGTGTGAACTTTTACTCTTCTCTTGCTGTTATCGCTCCATCGATACACCGGGAGAAATTAAAATGTCACTGGGCAAAAAGATAACACTTCCCCAGGCGAAATTAACTGGTTTTCAGCCCTGCATTGAAAGAATGCTGAATCTGACAGACCATTTAAGGAGATTACGTGTTGATCGATATGAATATGTTGCTATGAAGGTTATTGTTCTACTACAATCGGGTAAGTTTAAAACAAGTGTTCCCAAATAA
- Protein Sequence
- MSTIKTENIAGAALVTTTTATAHAAVIGGGATTFQLPINMSTTGLGGGSGGVITTTTTTTRNNISVTNIKCEVDDGSTLSSSSTSTNGNIVSVGFYNGSRGGGAIMGSAGQSAGVITSGHGIRIPVTKTEDSDSETELTHIENLKVTRRVVSSSSSSTNHYNGPRPMSWEGELSENEDTREAELMDTDTTMSNGGTQEPINAVAVIKSEATTTTPSGQGSLLQSESDHTALDIHHSTGGGIYHPKLKLAPTQSDPINLKYEPPDLGGLVNSPLMARQKSTTALPHLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHQTPHVVYGSFNGASTNSLHHSALLYRPMAGSSQGNQTPKLENTSGEAQNLSMDASSLPSTLNMSTDSSGLPASPAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCAVSITTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSIMSPLLSPEQQQSSAQSLLTQHQQSQLQHQLQQRLNPPLQSPHNHTNGFGSLNSSTSNNTTIKTEITDSYTKNNTTTPFPAHSPSLNGMNATSASPRNHSHSHSSSASSNSHNTSSSSNSHNNSIPQLLQEIMDVEHLWQYTDAELARLNQPLTSSSSSDSHNSLSTDSSPAAASQMTNPLLASAGLSSSTNPDLIAHLCKVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSLGKKITLPQAKLTGFQPCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSGKFKTSVPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01259264;
- 90% Identity
- iTF_01175191;
- 80% Identity
- iTF_01175191;